FFCP PHASE1:Hg19::chr17:42983748..42983759,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:42983748..42983759,-
|short_description=p28@GFAP
|description=CAGE_peak_28_at_GFAP_5end
|association_with_transcript=111bp_to_U92979_5end
|EntrezGene=267...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=111bp_to_U92979_5end | |||
|cluster_id=chr17:42983748..42983759,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_28_at_GFAP_5end | |||
|id=chr17:42983748..42983759,- | |||
|ontology_enrichment_celltype=CL:0002605!1.90e-12!3;CL:0000128!6.69e-09!7;CL:0000126!6.69e-09!7;CL:0000127!6.69e-09!7;CL:0002453!6.69e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;8.05e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,9.10e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.74e-23;3!UBERON:0003057;3.74e-23;3!UBERON:0006601;2.96e-10;82!UBERON:0006222;9.11e-09;1!UBERON:0005425;2.64e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p28@GFAP | |||
}} | }} |
Latest revision as of 23:08, 24 September 2015
Short description: | p28@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 111bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 9.10e-11 | 3 |