FFCP PHASE1:Hg19::chr17:42988799..42988810,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=A1L194 | |UniProt=A1L194 | ||
|association_with_transcript=-1bp_to_BC127871_5end | |association_with_transcript=-1bp_to_BC127871_5end | ||
|cluster_id=chr17:42988799..42988810,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_23_at_GFAP_5end | |description=CAGE_peak_23_at_GFAP_5end | ||
|id=chr17:42988799..42988810,- | |id=chr17:42988799..42988810,- | ||
|ontology_enrichment_celltype=CL:0000128!3.33e-10!7;CL:0000126!3.33e-10!7;CL:0000127!3.33e-10!7;CL:0002453!3.33e-10!7;CL:0002605!1.48e-09!3 | |ontology_enrichment_celltype=CL:0000128!3.33e-10!7;CL:0000126!3.33e-10!7;CL:0000127!3.33e-10!7;CL:0002453!3.33e-10!7;CL:0002605!1.48e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.16e-17;3!CL:0000128;2.27e-13;7!CL:0000126;2.27e-13;7!CL:0000127;2.27e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.47e-17,3;CL:0000128,2.85e-13,7;CL:0000126,2.85e-13,7;CL:0000127,2.85e-13,7;CL:0002453,2.85e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.42e-19;3!UBERON:0003057;1.42e-19;3!UBERON:0006601;8.42e-14;82!UBERON:0006222;1.74e-07;1!UBERON:0005425;5.18e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.72e-102!57;UBERON:0005068!1.72e-102!57;UBERON:0006241!1.72e-102!57;UBERON:0007135!1.72e-102!57;UBERON:0001017!3.74e-87!82;UBERON:0002616!9.34e-85!59;UBERON:0005743!1.40e-82!86;UBERON:0000073!8.26e-80!94;UBERON:0001016!8.26e-80!94;UBERON:0000955!3.10e-77!69;UBERON:0006238!3.10e-77!69;UBERON:0003075!2.84e-73!86;UBERON:0007284!2.84e-73!86;UBERON:0002780!7.99e-72!41;UBERON:0001890!7.99e-72!41;UBERON:0006240!7.99e-72!41;UBERON:0003080!6.29e-70!42;UBERON:0002346!1.76e-69!90;UBERON:0002020!1.26e-67!34;UBERON:0003528!1.26e-67!34;UBERON:0001893!2.91e-67!34;UBERON:0002791!9.66e-65!33;UBERON:0001869!1.49e-61!32;UBERON:0007023!9.79e-50!115;UBERON:0003056!1.65e-48!61;UBERON:0004121!2.52e-44!169;UBERON:0000956!9.64e-44!25;UBERON:0000203!9.64e-44!25;UBERON:0000924!5.36e-43!173;UBERON:0006601!5.36e-43!173;UBERON:0000033!1.07e-42!123;UBERON:0000153!3.63e-40!129;UBERON:0007811!3.63e-40!129;UBERON:0002619!3.75e-36!22;UBERON:0003076!2.74e-32!15;UBERON:0003057!2.74e-32!15;UBERON:0001950!6.66e-31!20;UBERON:0004732!2.84e-26!13;UBERON:0002308!1.06e-25!9;UBERON:0000125!1.06e-25!9;UBERON:0002420!5.14e-25!9;UBERON:0007245!5.14e-25!9;UBERON:0010009!5.14e-25!9;UBERON:0010011!5.14e-25!9;UBERON:0000454!5.14e-25!9;UBERON:0000025!3.57e-24!194;UBERON:0004733!1.02e-23!12;UBERON:0002028!1.02e-23!12;UBERON:0007277!1.02e-23!12;UBERON:0009663!6.15e-20!7;UBERON:0002298!6.09e-19!8;UBERON:0004111!4.51e-17!241;UBERON:0000200!1.43e-16!6;UBERON:0002680!2.26e-15!9;UBERON:0001895!2.26e-15!9;UBERON:0010092!2.26e-15!9;UBERON:0000064!2.82e-15!219;UBERON:0000349!6.85e-15!5;UBERON:0000477!3.80e-14!286;UBERON:0000483!5.91e-13!309;UBERON:0000119!1.04e-12!312;UBERON:0001871!1.74e-12!7;UBERON:0000369!1.49e-11!4;UBERON:0002435!1.49e-11!4;UBERON:0000204!1.49e-11!4;UBERON:0010082!1.49e-11!4;UBERON:0000475!4.08e-11!365;UBERON:0001896!1.44e-10!3;UBERON:0005290!1.44e-10!3;UBERON:0010096!1.44e-10!3;UBERON:0002240!1.48e-10!3;UBERON:0006331!2.49e-10!3;UBERON:0000988!3.80e-10!3;UBERON:0005174!3.91e-10!5;UBERON:0001137!3.91e-10!5;UBERON:0002771!3.12e-09!3;UBERON:0001872!3.21e-09!5;UBERON:0005383!4.63e-09!3;UBERON:0005382!4.63e-09!3;UBERON:0002037!8.71e-08!6;UBERON:0006215!8.71e-08!6;UBERON:0000481!9.01e-08!347;UBERON:0002148!1.79e-07!2;UBERON:0009662!1.79e-07!2;UBERON:0001954!2.58e-07!2;UBERON:0003022!2.58e-07!2;UBERON:0002421!2.58e-07!2;UBERON:0002600!2.58e-07!2;UBERON:0001875!2.91e-07!2;UBERON:0006514!2.91e-07!2;UBERON:0005162!3.49e-07!2;UBERON:0000122!3.49e-07!2;UBERON:0001897!3.71e-07!2;UBERON:0000062!4.05e-07!511;UBERON:0001894!5.12e-07!7;UBERON:0006222!5.12e-07!7;UBERON:0000922!5.89e-07!612;UBERON:0001873!8.71e-07!2;UBERON:0010122!8.71e-07!2;UBERON:0001876!9.23e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.72e-102!57;UBERON:0005068!1.72e-102!57;UBERON:0006241!1.72e-102!57;UBERON:0007135!1.72e-102!57;UBERON:0001017!3.74e-87!82;UBERON:0002616!9.34e-85!59;UBERON:0005743!1.40e-82!86;UBERON:0000073!8.26e-80!94;UBERON:0001016!8.26e-80!94;UBERON:0000955!3.10e-77!69;UBERON:0006238!3.10e-77!69;UBERON:0003075!2.84e-73!86;UBERON:0007284!2.84e-73!86;UBERON:0002780!7.99e-72!41;UBERON:0001890!7.99e-72!41;UBERON:0006240!7.99e-72!41;UBERON:0003080!6.29e-70!42;UBERON:0002346!1.76e-69!90;UBERON:0002020!1.26e-67!34;UBERON:0003528!1.26e-67!34;UBERON:0001893!2.91e-67!34;UBERON:0002791!9.66e-65!33;UBERON:0001869!1.49e-61!32;UBERON:0007023!9.79e-50!115;UBERON:0003056!1.65e-48!61;UBERON:0004121!2.52e-44!169;UBERON:0000956!9.64e-44!25;UBERON:0000203!9.64e-44!25;UBERON:0000924!5.36e-43!173;UBERON:0006601!5.36e-43!173;UBERON:0000033!1.07e-42!123;UBERON:0000153!3.63e-40!129;UBERON:0007811!3.63e-40!129;UBERON:0002619!3.75e-36!22;UBERON:0003076!2.74e-32!15;UBERON:0003057!2.74e-32!15;UBERON:0001950!6.66e-31!20;UBERON:0004732!2.84e-26!13;UBERON:0002308!1.06e-25!9;UBERON:0000125!1.06e-25!9;UBERON:0002420!5.14e-25!9;UBERON:0007245!5.14e-25!9;UBERON:0010009!5.14e-25!9;UBERON:0010011!5.14e-25!9;UBERON:0000454!5.14e-25!9;UBERON:0000025!3.57e-24!194;UBERON:0004733!1.02e-23!12;UBERON:0002028!1.02e-23!12;UBERON:0007277!1.02e-23!12;UBERON:0009663!6.15e-20!7;UBERON:0002298!6.09e-19!8;UBERON:0004111!4.51e-17!241;UBERON:0000200!1.43e-16!6;UBERON:0002680!2.26e-15!9;UBERON:0001895!2.26e-15!9;UBERON:0010092!2.26e-15!9;UBERON:0000064!2.82e-15!219;UBERON:0000349!6.85e-15!5;UBERON:0000477!3.80e-14!286;UBERON:0000483!5.91e-13!309;UBERON:0000119!1.04e-12!312;UBERON:0001871!1.74e-12!7;UBERON:0000369!1.49e-11!4;UBERON:0002435!1.49e-11!4;UBERON:0000204!1.49e-11!4;UBERON:0010082!1.49e-11!4;UBERON:0000475!4.08e-11!365;UBERON:0001896!1.44e-10!3;UBERON:0005290!1.44e-10!3;UBERON:0010096!1.44e-10!3;UBERON:0002240!1.48e-10!3;UBERON:0006331!2.49e-10!3;UBERON:0000988!3.80e-10!3;UBERON:0005174!3.91e-10!5;UBERON:0001137!3.91e-10!5;UBERON:0002771!3.12e-09!3;UBERON:0001872!3.21e-09!5;UBERON:0005383!4.63e-09!3;UBERON:0005382!4.63e-09!3;UBERON:0002037!8.71e-08!6;UBERON:0006215!8.71e-08!6;UBERON:0000481!9.01e-08!347;UBERON:0002148!1.79e-07!2;UBERON:0009662!1.79e-07!2;UBERON:0001954!2.58e-07!2;UBERON:0003022!2.58e-07!2;UBERON:0002421!2.58e-07!2;UBERON:0002600!2.58e-07!2;UBERON:0001875!2.91e-07!2;UBERON:0006514!2.91e-07!2;UBERON:0005162!3.49e-07!2;UBERON:0000122!3.49e-07!2;UBERON:0001897!3.71e-07!2;UBERON:0000062!4.05e-07!511;UBERON:0001894!5.12e-07!7;UBERON:0006222!5.12e-07!7;UBERON:0000922!5.89e-07!612;UBERON:0001873!8.71e-07!2;UBERON:0010122!8.71e-07!2;UBERON:0001876!9.23e-07!2 | ||
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|short_description=p23@GFAP | |short_description=p23@GFAP | ||
}} | }} |
Latest revision as of 23:42, 24 September 2015
Short description: | p23@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -1bp_to_BC127871_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A1L194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.47e-17 | 3 |
oligodendrocyte | 2.85e-13 | 7 |
macroglial cell | 2.85e-13 | 7 |
astrocyte | 2.85e-13 | 7 |
oligodendrocyte precursor cell | 2.85e-13 | 7 |