FFCP PHASE1:Hg19::chr17:42988813..42988850,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42988813..42988850,- to FFCP PHASE1:Hg19::chr17:42988813..42988850,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=A1L194 | |UniProt=A1L194 | ||
|association_with_transcript=-15bp_to_BC127871_5end | |||
|cluster_id=chr17:42988813..42988850,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_GFAP_5end | |||
|id=chr17:42988813..42988850,- | |||
|ontology_enrichment_celltype=CL:0000128!2.86e-09!7;CL:0000126!2.86e-09!7;CL:0000127!2.86e-09!7;CL:0002453!2.86e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;4.91e-12;7!CL:0000126;4.91e-12;7!CL:0000127;4.91e-12;7!CL:0002605;7.51e-11;3!CL:0002319;6.18e-08;25!CL:0000047;5.89e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.70e-12,7;CL:0000126,4.70e-12,7;CL:0000127,4.70e-12,7;CL:0002453,4.70e-12,7;CL:0002605,7.77e-11,3;CL:0002319,6.48e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.63e-17;82!UBERON:0006241;3.03e-11;3!UBERON:0003057;3.03e-11;3!UBERON:0006215;1.31e-09;3!UBERON:0010122;5.89e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.45e-67;34!UBERON:0003528;7.17e-67;34!UBERON:0002020;7.17e-67;34!UBERON:0002791;5.43e-64;32!UBERON:0001869;9.05e-64;32!UBERON:0000073;4.54e-63;53!UBERON:0002616;4.54e-63;53!UBERON:0002780;3.40e-54;41!UBERON:0001890;3.40e-54;41!UBERON:0000956;4.31e-52;25!UBERON:0000203;4.31e-52;25!UBERON:0002619;3.35e-43;22!UBERON:0001017;1.79e-40;75!UBERON:0000955;4.54e-39;68!UBERON:0001950;1.68e-37;20!UBERON:0001016;7.85e-35;83!UBERON:0004732;1.35e-34;13!UBERON:0004733;1.82e-31;12!UBERON:0002028;1.82e-31;12!UBERON:0000125;1.32e-27;9!UBERON:0002308;1.32e-27;9!UBERON:0002420;1.28e-26;9!UBERON:0007245;1.28e-26;9!UBERON:0010009;1.28e-26;9!UBERON:0010011;1.28e-26;9!UBERON:0000454;1.28e-26;9!UBERON:0002680;4.68e-22;9!UBERON:0001895;4.68e-22;9!UBERON:0009663;2.35e-21;7!UBERON:0002298;1.53e-20;6!UBERON:0000200;9.83e-18;6!UBERON:0000349;1.23e-15;5!UBERON:0001872;8.71e-15;5!UBERON:0007023;1.95e-14;114!UBERON:0002037;4.48e-13;6!UBERON:0000369;2.95e-12;4!UBERON:0002435;2.95e-12;4!UBERON:0000204;2.95e-12;4!UBERON:0011216;1.30e-11;132!UBERON:0001896;2.74e-11;3!UBERON:0005290;2.74e-11;3!UBERON:0002240;3.03e-11;3!UBERON:0005174;3.03e-11;3!UBERON:0001137;3.03e-11;3!UBERON:0000988;5.50e-11;3!UBERON:0001871;1.06e-10;6!UBERON:0010314;1.17e-09;132!UBERON:0001870;1.65e-09;3!UBERON:0005383;1.65e-09;3!UBERON:0005382;1.65e-09;3!UBERON:0005162;4.37e-08;2!UBERON:0000122;4.37e-08;2!UBERON:0002148;5.72e-08;2!UBERON:0006331;5.72e-08;2!UBERON:0009662;5.72e-08;2!UBERON:0001897;7.10e-08;2!UBERON:0010225;7.10e-08;2!UBERON:0001875;9.11e-08;2!UBERON:0006514;9.11e-08;2!UBERON:0001954;1.28e-07;2!UBERON:0003022;1.28e-07;2!UBERON:0002421;1.28e-07;2!UBERON:0002600;1.28e-07;2!UBERON:0004121;3.47e-07;165!UBERON:0002771;5.89e-07;2!UBERON:0001876;5.89e-07;2!UBERON:0001873;5.89e-07;2!UBERON:0002702;5.89e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.69e-120,56;UBERON:0005068,5.69e-120,56;UBERON:0006241,5.69e-120,56;UBERON:0007135,5.69e-120,56;UBERON:0000073,3.99e-110,53;UBERON:0002616,3.99e-110,53;UBERON:0001017,2.11e-105,81;UBERON:0001016,6.88e-98,89;UBERON:0000955,1.23e-90,68;UBERON:0006238,1.23e-90,68;UBERON:0003075,7.08e-90,82;UBERON:0007284,7.08e-90,82;UBERON:0002346,3.50e-85,86;UBERON:0002780,1.33e-78,41;UBERON:0001890,1.33e-78,41;UBERON:0003080,1.33e-78,41;UBERON:0006240,1.33e-78,41;UBERON:0003528,1.57e-78,34;UBERON:0002020,1.57e-78,34;UBERON:0001893,2.60e-78,34;UBERON:0002791,3.41e-72,32;UBERON:0001869,5.91e-72,32;UBERON:0010371,2.21e-71,104;UBERON:0003056,1.37e-60,61;UBERON:0010314,2.74e-56,132;UBERON:0004121,9.42e-54,171;UBERON:0000924,9.42e-54,171;UBERON:0006601,9.42e-54,171;UBERON:0000956,2.51e-52,25;UBERON:0000203,2.51e-52,25;UBERON:0007023,1.67e-46,114;UBERON:0002619,1.94e-43,22;UBERON:0003076,4.04e-41,15;UBERON:0003057,4.04e-41,15;UBERON:0001950,1.01e-37,20;UBERON:0004732,8.69e-35,13;UBERON:0011216,1.13e-33,223;UBERON:0004733,1.23e-31,12;UBERON:0002028,1.23e-31,12;UBERON:0007277,1.23e-31,12;UBERON:0000125,1.27e-27,9;UBERON:0002308,1.27e-27,9;UBERON:0000025,4.21e-27,192;UBERON:0002420,7.81e-27,9;UBERON:0007245,7.81e-27,9;UBERON:0010009,7.81e-27,9;UBERON:0010011,7.81e-27,9;UBERON:0000454,7.81e-27,9;UBERON:0002680,3.26e-22,9;UBERON:0001895,3.26e-22,9;UBERON:0010092,3.26e-22,9;UBERON:0009663,2.29e-21,7;UBERON:0002298,1.53e-20,6;UBERON:0004111,1.85e-20,240;UBERON:0000200,1.05e-17,6;UBERON:0000483,3.10e-17,306;UBERON:0000119,6.00e-17,309;UBERON:0000349,8.46e-16,5;UBERON:0001872,9.28e-15,5;UBERON:0002037,3.17e-13,6;UBERON:0006215,3.17e-13,6;UBERON:0000369,2.70e-12,4;UBERON:0002435,2.70e-12,4;UBERON:0000204,2.70e-12,4;UBERON:0010082,2.70e-12,4;UBERON:0001896,2.70e-11,3;UBERON:0005290,2.70e-11,3;UBERON:0010096,2.70e-11,3;UBERON:0002240,3.08e-11,3;UBERON:0005174,3.08e-11,3;UBERON:0001137,3.08e-11,3;UBERON:0000988,5.60e-11,3;UBERON:0001871,9.44e-11,6;UBERON:0001870,1.11e-09,3;UBERON:0005383,1.33e-09,3;UBERON:0005382,1.33e-09,3;UBERON:0000923,1.22e-08,560;UBERON:0010316,1.22e-08,560;UBERON:0005291,1.22e-08,560;UBERON:0006598,1.22e-08,560;UBERON:0010317,1.22e-08,560;UBERON:0002532,1.22e-08,560;UBERON:0002050,1.76e-08,564;UBERON:0005162,4.16e-08,2;UBERON:0000122,4.16e-08,2;UBERON:0000922,4.88e-08,592;UBERON:0002148,5.63e-08,2;UBERON:0006331,5.63e-08,2;UBERON:0009662,5.63e-08,2;UBERON:0001897,7.35e-08,2;UBERON:0010225,7.35e-08,2;UBERON:0005423,7.76e-08,581;UBERON:0001875,9.90e-08,2;UBERON:0006514,9.90e-08,2;UBERON:0001954,1.24e-07,2;UBERON:0003022,1.24e-07,2;UBERON:0002421,1.24e-07,2;UBERON:0002600,1.24e-07,2;UBERON:0001876,3.70e-07,2;UBERON:0001873,4.60e-07,2;UBERON:0010122,4.60e-07,2;UBERON:0002702,5.21e-07,2;UBERON:0002771,7.77e-07,2 | |||
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| ||
|short_description=p6@GFAP | |||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p6@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -15bp_to_BC127871_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A1L194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.70e-12 | 7 |
macroglial cell | 4.70e-12 | 7 |
astrocyte | 4.70e-12 | 7 |
oligodendrocyte precursor cell | 4.70e-12 | 7 |
astrocyte of the cerebral cortex | 7.77e-11 | 3 |
neural cell | 6.48e-08 | 25 |