FFCP PHASE1:Hg19::chr19:10381148..10381174,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:10381148..10381174,+
|short_description=p3@ICAM1
|description=CAGE_peak_3_at_ICAM1_5end
|association_with_transcript=-342bp_to_ENST00000264832,NM_000201,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3383 | |EntrezGene=3383 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5344 | |HGNC=5344 | ||
|TSSclassifier=strong | |||
|UniProt=P05362 | |UniProt=P05362 | ||
|association_with_transcript=-342bp_to_ENST00000264832,NM_000201,uc002mnq.2,uc010xle.1_5end | |||
|cluster_id=chr19:10381148..10381174,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_3_at_ICAM1_5end | |||
|id=chr19:10381148..10381174,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.53e-73!140;CL:0000037!9.85e-65!172;CL:0000566!9.85e-65!172;CL:0000988!6.19e-64!182;CL:0002057!8.02e-63!42;CL:0000766!7.93e-61!76;CL:0002032!3.90e-58!165;CL:0000837!3.90e-58!165;CL:0002087!4.97e-58!119;CL:0002031!8.85e-58!124;CL:0000860!1.46e-57!45;CL:0000557!1.21e-48!71;CL:0000839!2.00e-47!70;CL:0002194!1.43e-43!63;CL:0000576!1.43e-43!63;CL:0000040!1.43e-43!63;CL:0000559!1.43e-43!63;CL:0000763!2.00e-43!112;CL:0000049!2.00e-43!112;CL:0002009!9.58e-42!65;CL:0000134!1.50e-23!358;CL:0002320!1.62e-22!365;CL:0000219!4.05e-20!390;CL:0000034!7.70e-17!444;CL:0000048!2.22e-16!430;CL:0000723!9.64e-16!436;CL:0002393!1.79e-14!9;CL:0002397!1.79e-14!9;CL:0000094!3.51e-13!8;CL:0000838!4.62e-13!52;CL:0000542!1.15e-12!53;CL:0000051!1.15e-12!53;CL:0000081!3.95e-11!11;CL:0000080!2.09e-08!6;CL:0000945!2.99e-08!24;CL:0000826!2.99e-08!24;CL:0002371!7.18e-08!591;CL:0002274!3.05e-07!5;CL:0000457!3.05e-07!5;CL:0002191!3.05e-07!5;CL:0000097!3.05e-07!5;CL:0000831!3.05e-07!5;CL:0002028!3.05e-07!5;CL:0000063!3.85e-07!578;CL:0000144!4.03e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-78;33!CL:0002057;4.38e-78;33!CL:0000473;1.91e-57;39!CL:0000234;1.91e-57;39!CL:0000576;2.39e-57;48!CL:0000766;8.41e-47;69!CL:0000094;3.97e-23;8!CL:0000763;2.71e-21;100!CL:0002087;1.17e-20;104!CL:0002393;1.23e-18;6!CL:0002397;1.23e-18;6!CL:0000081;2.08e-16;11!CL:0000738;4.21e-15;136!CL:0000988;4.45e-11;177!CL:0000767;8.57e-10;3!CL:0000775;1.84e-09;3!CL:0000226;2.87e-09;3!CL:0000842;2.87e-09;3!CL:0000875;1.21e-08;3!CL:0002396;1.21e-08;3!CL:0000784;1.79e-08;3!CL:0000219;3.27e-08;193!CL:0000771;2.78e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.70e-111,42;CL:0002057,3.70e-111,42;CL:0000766,2.03e-103,72;CL:0000473,1.13e-100,48;CL:0000234,1.13e-100,48;CL:0002194,4.43e-82,59;CL:0000576,4.43e-82,59;CL:0000040,4.43e-82,59;CL:0000559,4.43e-82,59;CL:0000557,1.32e-81,67;CL:0000839,2.36e-79,66;CL:0002009,4.70e-79,61;CL:0000738,1.08e-77,136;CL:0000763,1.65e-67,108;CL:0000049,1.65e-67,108;CL:0000037,2.24e-62,168;CL:0002087,2.86e-59,115;CL:0000988,1.73e-58,177;CL:0002032,1.27e-54,161;CL:0000837,1.27e-54,161;CL:0002031,1.33e-53,120;CL:0002393,1.29e-25,9;CL:0002397,1.29e-25,9;CL:0000094,3.34e-23,8;CL:0000134,5.23e-23,354;CL:0002320,2.82e-22,361;CL:0000219,1.07e-19,386;CL:0000034,3.31e-17,441;CL:0000048,1.52e-16,427;CL:0000081,1.84e-16,11;CL:0000723,4.13e-16,433;CL:0000767,8.97e-10,3;CL:0000775,1.61e-09,3;CL:0000226,2.72e-09,3;CL:0000842,2.72e-09,3;CL:0000875,9.67e-09,3;CL:0002396,9.67e-09,3;CL:0000784,1.54e-08,3;CL:0000771,2.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.34e-79;42!CL:0000049;9.39e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.25e-51!102;UBERON:0003061!1.25e-51!102;UBERON:0002193!1.50e-46!112;UBERON:0002371!9.75e-45!80;UBERON:0001474!2.41e-40!86;UBERON:0002405!2.61e-35!115;UBERON:0004765!1.11e-31!101;UBERON:0001434!1.11e-31!101;UBERON:0002384!9.13e-22!375;UBERON:0003081!5.71e-17!216;UBERON:0002204!5.30e-14!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-70,76;UBERON:0001474,1.19e-64,82;UBERON:0002390,5.80e-63,98;UBERON:0003061,5.80e-63,98;UBERON:0004765,6.75e-58,90;UBERON:0002193,5.23e-56,108;UBERON:0002405,1.16e-55,93;UBERON:0001434,5.83e-51,100;UBERON:0002204,7.66e-26,167;UBERON:0003081,5.30e-24,203;UBERON:0002384,2.81e-21,371;UBERON:0000926,3.80e-11,315;UBERON:0004120,3.80e-11,315;UBERON:0006603,3.80e-11,315 | |||
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|short_description=p3@ICAM1 | |||
}} | }} |
Latest revision as of 00:14, 25 September 2015
Short description: | p3@ICAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ICAM1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -342bp_to_ENST00000264832, NM_000201, uc002mnq.2, uc010xle.1_5end |
EntrezGene: | ICAM1 |
HGNC: | 5344 |
UniProt: | P05362 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-70 | 76 |
bone element | 1.19e-64 | 82 |
hematopoietic system | 5.80e-63 | 98 |
blood island | 5.80e-63 | 98 |
skeletal element | 6.75e-58 | 90 |
hemolymphoid system | 5.23e-56 | 108 |
immune system | 1.16e-55 | 93 |
skeletal system | 5.83e-51 | 100 |
musculoskeletal system | 7.66e-26 | 167 |
lateral plate mesoderm | 5.30e-24 | 203 |
connective tissue | 2.81e-21 | 371 |
mesoderm | 3.80e-11 | 315 |
mesoderm-derived structure | 3.80e-11 | 315 |
presumptive mesoderm | 3.80e-11 | 315 |