FFCP PHASE1:Hg19::chr1:215178832..215178850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3776 | |EntrezGene=3776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |HGNC=6277 | ||
|TSSclassifier=strong | |||
|UniProt=O95069,Q6ZW95 | |UniProt=O95069,Q6ZW95 | ||
|association_with_transcript=-34bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |association_with_transcript=-34bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | ||
|cluster_id=chr1:215178832..215178850,+ | |||
|coexpression_cluster_id=C633 | |coexpression_cluster_id=C633 | ||
|description=CAGE_peak_16_at_KCNK2_5end | |description=CAGE_peak_16_at_KCNK2_5end | ||
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|ontology_enrichment_celltype=CL:0000057!2.21e-36!75;CL:0002620!1.03e-23!23;CL:0000055!1.42e-20!180;CL:0002334!1.28e-12!12;CL:1000306!1.10e-07!4;CL:0002547!1.10e-07!4;CL:0000134!1.39e-07!358;CL:0002556!1.56e-07!6;CL:0002552!1.63e-07!5;CL:0000048!2.35e-07!430;CL:0002320!4.27e-07!365;CL:0000723!5.62e-07!436 | |ontology_enrichment_celltype=CL:0000057!2.21e-36!75;CL:0002620!1.03e-23!23;CL:0000055!1.42e-20!180;CL:0002334!1.28e-12!12;CL:1000306!1.10e-07!4;CL:0002547!1.10e-07!4;CL:0000134!1.39e-07!358;CL:0002556!1.56e-07!6;CL:0002552!1.63e-07!5;CL:0000048!2.35e-07!430;CL:0002320!4.27e-07!365;CL:0000723!5.62e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.74e-13;23!CL:1000306;1.86e-12;4!CL:0002547;1.86e-12;4!CL:0000057;3.78e-10;73!CL:0000197;3.81e-09;6!CL:0000098;3.81e-09;6!CL:0002167;3.81e-09;6!CL:0002556;9.45e-09;6!CL:0000346;3.67e-08;3!CL:1000428;3.67e-08;3!CL:0000135;4.71e-08;3!CL:0002580;4.71e-08;3!CL:0000388;4.71e-08;3!CL:0000228;7.59e-07;1!CL:0002372;7.59e-07;1 | |ontology_enrichment_celltype_v019=CL:0002620;1.74e-13;23!CL:1000306;1.86e-12;4!CL:0002547;1.86e-12;4!CL:0000057;3.78e-10;73!CL:0000197;3.81e-09;6!CL:0000098;3.81e-09;6!CL:0002167;3.81e-09;6!CL:0002556;9.45e-09;6!CL:0000346;3.67e-08;3!CL:1000428;3.67e-08;3!CL:0000135;4.71e-08;3!CL:0002580;4.71e-08;3!CL:0000388;4.71e-08;3!CL:0000228;7.59e-07;1!CL:0002372;7.59e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.17e-23,76;CL:0002620,1.47e-13,23;CL:1000306,2.66e-12,4;CL:0002547,2.66e-12,4;CL:0000197,3.67e-09,6;CL:0000098,3.67e-09,6;CL:0002167,3.67e-09,6;CL:0002556,8.40e-09,6;CL:0002580,2.76e-08,3;CL:0000135,3.82e-08,3;CL:0000388,3.82e-08,3;CL:0000346,4.10e-08,3;CL:1000428,4.10e-08,3;CL:0000228,6.08e-07,1;CL:0002372,6.08e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!6.46e-09!5;DOID:450!6.46e-09!5;DOID:66!6.46e-09!5;DOID:423!6.46e-09!5;DOID:0080000!6.46e-09!5;DOID:11722!6.46e-09!5 | |ontology_enrichment_disease=DOID:17!6.46e-09!5;DOID:450!6.46e-09!5;DOID:66!6.46e-09!5;DOID:423!6.46e-09!5;DOID:0080000!6.46e-09!5;DOID:11722!6.46e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:17;4.60e-10;5!DOID:450;4.60e-10;5!DOID:66;4.60e-10;5!DOID:423;4.60e-10;5!DOID:0080000;4.60e-10;5!DOID:11722;4.60e-10;5!DOID:1192;8.27e-08;3 | |ontology_enrichment_disease_v019=DOID:17;4.60e-10;5!DOID:450;4.60e-10;5!DOID:66;4.60e-10;5!DOID:423;4.60e-10;5!DOID:0080000;4.60e-10;5!DOID:11722;4.60e-10;5!DOID:1192;8.27e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.76e-10,5;DOID:450,4.76e-10,5;DOID:66,4.76e-10,5;DOID:423,4.76e-10,5;DOID:0080000,4.76e-10,5;DOID:11722,4.76e-10,5;DOID:1192,5.44e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.28e-21!45;UBERON:0002416!3.28e-21!45;UBERON:0002097!3.98e-21!40;UBERON:0003102!6.34e-21!95;UBERON:0002384!3.45e-08!375;UBERON:0000415!1.10e-07!4;UBERON:0007240!1.10e-07!4;UBERON:0005742!1.10e-07!4;UBERON:0005734!1.10e-07!4;UBERON:0004664!1.10e-07!4;UBERON:0004663!1.10e-07!4;UBERON:0000475!1.31e-07!365;UBERON:0002067!1.31e-07!9;UBERON:0004016!1.31e-07!9;UBERON:0010083!1.31e-07!9;UBERON:0001758!1.56e-07!6;UBERON:0003672!1.56e-07!6 | |ontology_enrichment_uberon=UBERON:0002199!3.28e-21!45;UBERON:0002416!3.28e-21!45;UBERON:0002097!3.98e-21!40;UBERON:0003102!6.34e-21!95;UBERON:0002384!3.45e-08!375;UBERON:0000415!1.10e-07!4;UBERON:0007240!1.10e-07!4;UBERON:0005742!1.10e-07!4;UBERON:0005734!1.10e-07!4;UBERON:0004664!1.10e-07!4;UBERON:0004663!1.10e-07!4;UBERON:0000475!1.31e-07!365;UBERON:0002067!1.31e-07!9;UBERON:0004016!1.31e-07!9;UBERON:0010083!1.31e-07!9;UBERON:0001758!1.56e-07!6;UBERON:0003672!1.56e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.86e-12;4!UBERON:0000415;1.86e-12;4!UBERON:0007240;1.86e-12;4!UBERON:0005742;1.86e-12;4!UBERON:0005734;1.86e-12;4!UBERON:0004664;1.86e-12;4!UBERON:0004663;1.86e-12;4!UBERON:0002097;4.73e-11;41!UBERON:0002199;4.72e-09;46!UBERON:0002416;4.72e-09;46!UBERON:0001758;9.45e-09;6!UBERON:0003672;9.45e-09;6!UBERON:0000412;3.67e-08;3!UBERON:0001992;3.67e-08;3!UBERON:0007846;4.71e-08;3!UBERON:0000043;4.71e-08;3!UBERON:0007845;4.71e-08;3!UBERON:0011137;5.38e-08;11!UBERON:0010323;5.38e-08;11!UBERON:0003129;1.47e-07;7!UBERON:0003102;4.92e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0004797;1.86e-12;4!UBERON:0000415;1.86e-12;4!UBERON:0007240;1.86e-12;4!UBERON:0005742;1.86e-12;4!UBERON:0005734;1.86e-12;4!UBERON:0004664;1.86e-12;4!UBERON:0004663;1.86e-12;4!UBERON:0002097;4.73e-11;41!UBERON:0002199;4.72e-09;46!UBERON:0002416;4.72e-09;46!UBERON:0001758;9.45e-09;6!UBERON:0003672;9.45e-09;6!UBERON:0000412;3.67e-08;3!UBERON:0001992;3.67e-08;3!UBERON:0007846;4.71e-08;3!UBERON:0000043;4.71e-08;3!UBERON:0007845;4.71e-08;3!UBERON:0011137;5.38e-08;11!UBERON:0010323;5.38e-08;11!UBERON:0003129;1.47e-07;7!UBERON:0003102;4.92e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.82e-13,41;UBERON:0000415,2.66e-12,4;UBERON:0007240,2.66e-12,4;UBERON:0005742,2.66e-12,4;UBERON:0005734,2.66e-12,4;UBERON:0004664,2.66e-12,4;UBERON:0004663,2.66e-12,4;UBERON:0002199,8.94e-12,46;UBERON:0002416,8.94e-12,46;UBERON:0003102,1.14e-11,99;UBERON:0001758,8.40e-09,6;UBERON:0003672,8.40e-09,6;UBERON:0007846,3.82e-08,3;UBERON:0000043,3.82e-08,3;UBERON:0007845,3.82e-08,3;UBERON:0000412,4.10e-08,3;UBERON:0001992,4.10e-08,3;UBERON:0010323,4.96e-08,11;UBERON:0003129,1.33e-07,7;UBERON:0004797,3.15e-07,7 | |||
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| ||
|short_description=p16@KCNK2 | |short_description=p16@KCNK2 | ||
}} | }} |
Latest revision as of 02:20, 25 September 2015
Short description: | p16@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | -34bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.17e-23 | 76 |
skin fibroblast | 1.47e-13 | 23 |
fibroblast of tunica adventitia of artery | 2.66e-12 | 4 |
fibroblast of the aortic adventitia | 2.66e-12 | 4 |
receptor cell | 3.67e-09 | 6 |
sensory epithelial cell | 3.67e-09 | 6 |
olfactory epithelial cell | 3.67e-09 | 6 |
fibroblast of periodontium | 8.40e-09 | 6 |
preadipocyte of the breast | 2.76e-08 | 3 |
fibrocyte | 3.82e-08 | 3 |
tendon cell | 3.82e-08 | 3 |
hair follicle dermal papilla cell | 4.10e-08 | 3 |
stem cell of epidermis | 4.10e-08 | 3 |
multinucleate cell | 6.08e-07 | 1 |
myotube | 6.08e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.82e-13 | 41 |
artery wall | 2.66e-12 | 4 |
tunica adventitia of artery | 2.66e-12 | 4 |
adventitia | 2.66e-12 | 4 |
tunica adventitia of blood vessel | 2.66e-12 | 4 |
aorta tunica adventitia | 2.66e-12 | 4 |
aorta wall | 2.66e-12 | 4 |
integument | 8.94e-12 | 46 |
integumental system | 8.94e-12 | 46 |
surface structure | 1.14e-11 | 99 |
periodontium | 8.40e-09 | 6 |
dentition | 8.40e-09 | 6 |
dense regular connective tissue | 3.82e-08 | 3 |
tendon | 3.82e-08 | 3 |
regular connective tissue | 3.82e-08 | 3 |
dermal papilla | 4.10e-08 | 3 |
papillary layer of dermis | 4.10e-08 | 3 |
cranial skeletal system | 4.96e-08 | 11 |
skull | 1.33e-07 | 7 |
blood vessel layer | 3.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.76e-10 | 5 |
myotonic disease | 4.76e-10 | 5 |
muscle tissue disease | 4.76e-10 | 5 |
myopathy | 4.76e-10 | 5 |
muscular disease | 4.76e-10 | 5 |
myotonic dystrophy | 4.76e-10 | 5 |
peripheral nervous system neoplasm | 5.44e-08 | 3 |