FFCP PHASE1:Hg19::chr2:231077626..231077651,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:231077626..231077651,- to FFCP PHASE1:Hg19::chr2:231077626..231077651,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3431 | |EntrezGene=3431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5401 | |HGNC=5401 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000486146_5end | |||
|cluster_id=chr2:231077626..231077651,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_SP110_5end | |||
|id=chr2:231077626..231077651,- | |||
|ontology_enrichment_celltype=CL:0000738!4.64e-24!140;CL:0002087!6.36e-23!119;CL:0002031!1.94e-20!124;CL:0000037!4.12e-18!172;CL:0000566!4.12e-18!172;CL:0000988!1.52e-17!182;CL:0002057!2.25e-17!42;CL:0002032!5.07e-17!165;CL:0000837!5.07e-17!165;CL:0000860!2.01e-16!45;CL:0000766!2.16e-14!76;CL:0000839!8.25e-12!70;CL:0002194!1.16e-11!63;CL:0000576!1.16e-11!63;CL:0000040!1.16e-11!63;CL:0000559!1.16e-11!63;CL:0000557!6.49e-11!71;CL:0002009!1.49e-10!65;CL:0000542!2.16e-10!53;CL:0000051!2.16e-10!53;CL:0000838!3.64e-10!52;CL:0002320!5.54e-08!365;CL:0000763!6.57e-08!112;CL:0000049!6.57e-08!112;CL:0000134!1.39e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.91e-16;33!CL:0002057;1.91e-16;33!CL:0000473;1.42e-11;39!CL:0000234;1.42e-11;39!CL:0000576;4.52e-11;48!CL:0002087;1.36e-08;104!CL:0000766;7.17e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.67e-22,136;CL:0000860,2.65e-21,42;CL:0002057,2.65e-21,42;CL:0002087,7.29e-20,115;CL:0000473,4.25e-19,48;CL:0000234,4.25e-19,48;CL:0002031,2.78e-17,120;CL:0000766,1.58e-16,72;CL:0000037,5.85e-16,168;CL:0002032,7.54e-15,161;CL:0000837,7.54e-15,161;CL:0000988,2.64e-14,177;CL:0002194,1.67e-13,59;CL:0000576,1.67e-13,59;CL:0000040,1.67e-13,59;CL:0000559,1.67e-13,59;CL:0002009,8.56e-13,61;CL:0000839,3.77e-12,66;CL:0000557,7.60e-12,67;CL:0000763,4.24e-09,108;CL:0000049,4.24e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.33e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.84e-15!102;UBERON:0003061!6.84e-15!102;UBERON:0002193!4.01e-13!112;UBERON:0002371!1.45e-08!80;UBERON:0002405!3.80e-08!115;UBERON:0001474!4.26e-08!86;UBERON:0004765!9.25e-08!101;UBERON:0001434!9.25e-08!101;UBERON:0002384!3.79e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-10;15!UBERON:0000179;2.25e-10;15!UBERON:0000463;2.25e-10;15!UBERON:0002390;2.02e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-19,98;UBERON:0003061,1.02e-19,98;UBERON:0002193,8.46e-18,108;UBERON:0002405,6.54e-11,93;UBERON:0000178,1.18e-10,15;UBERON:0000179,1.18e-10,15;UBERON:0000463,1.18e-10,15;UBERON:0002371,2.31e-10,76;UBERON:0001474,5.20e-09,82;UBERON:0004765,3.87e-08,90;UBERON:0003081,2.20e-07,203 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0.662794751455832,2.01697543935533,0,0,0.487932798790507,0.369363174230364,0.612002073732759,0,0,0,0.125542639594803,4.50839093912912,2.21671591514854,2.67616656466509,0.393364276848904,0,0.154816123316076,0,0,0,0.92960640696362,0.426507697462265,0.293600439334847,0.553995408531877,1.60435557976113,0.651032612147555,0.447830948479849,0.647787332037959,0.77272670290256,1.45398238779565,1.88937971844405,0.485168122375632,0.464858073811369,0.822335776043652,0.619412741790207,7.48000220037591,8.45330331546032,4.96612682766029,0.344745680736619,0.645484683583826,1.35426486594342,0.752969358170419,0.545812300115692,0.898893937780338,3.36692281607993,1.60464513538047,0.639337125799041,11.8746468067218,10.5715738539465,8.09827026012119,6.38460324982885,0.56738522469114,1.86846674698672,7.03496262718881,5.73631210262222,4.56096573880745,7.87019353423379,2.94622108790052,1.58231193720442,1.47878700418359,2.76385589954557,0.419317291016752,2.3589012540764,1.20141514273205,2.57160938715328,0.285012743741249,3.58050018958362,1.46131323011707,0,2.73069305631066,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,2.27685187643779,2.93618594685469,3.05818582500183,0,0.560508562981536,0,0.590129310341499,2.35806457649499,1.85041349099558,3.00935691703221,0.977766799900771,0.473447805734733,3.89653456815823,1.33692548262208,1.17842362989935,0.886135578334485,1.08321545506006,1.40900451698243,1.1705341280389,2.46656856905514,1.38175008892924,3.18783394308558,1.33457906845854,1.33770414044857,0,2.37949619664889,0.766440987203842,0,1.26509846009751,0.95569624297229,1.95325036156926,0,0.903450714466637,1.02389288923535,1.24930726552346,0.947109008176067,0.821127996921047,2.21767417547206,0.802320587350522,1.44824403882799,0,0,0,0.361439152384566,0,0.289693037921647,0.795285947051099,0,0,0.221729397462564,0.175669571386252,0.72038491523742,0.364295288292542,0,0,0.174129737299267,0.664789802594326,0.238490624305342,1.71598473234038,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,1.62028389576352,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0,5.27121669744253,7.75560528296651,0,0,0.633152558322899,0.529636723252875,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.469737994575059,0.323745888736263,0.280901613404497,0,0.245668634623536,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0.423863802319124,0.600182192168805,0.824420233907511,0.515281080091258,0.18611685633159,0,0.487185025805993,1.00973509697646,0.552299391853796,0.646584227275248,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,0.365921118388786,0.265059536642971,0,0.310983165046111,0,0,0,0,0,2.3218396401599,2.16563844500876,0.118306800039844,0.505754070234305,0,0,0,0,0.404493924480493,0,0.38474715694639,0.738155454624648,1.40241773803446,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0.441463099414651,0.122988438543114,0,0.439001141634502,0,0.201057944823262,0.555530670951178,0.977424915930974,1.03993478527958,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.738651018262192,0.234004265139238,0.594524649154913,0.93733833986777,0.671928512795438,1.13420077793909,0.0895585227028483,0.290633938513962,0,0.492663237895943,1.23267807618516,0.621984346622316,0.576479813667846,0.6312121671319,0.126995788584338,0.381988425558278,1.17217447210047,0,0.205654985406647,0,1.42913216315289,0.112131084345361,0,0.1466765716419,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.904318131178758,0.871533458600294,0.399891964728228,0,0.502257091432126,2.10833939483032,0.958499421966331,0,0,0.579125226670317,0.205476322550383,0,0.672510863961164,0.591092280605782,1.07813787429759,0.641715181398742,0,0,0,0,0,22.4702107184155,23.932916736322,24.8649308061621,0.858840442033979,0,0.813795071099207,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.60818530127658,0.391602314925481,0.686286847621712,2.27444828735176,1.94142780736755,0.853820462427555,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0.561320188866147,0.128139149255701,0.511707249066704,0.160853921143607,0,1.3878872442239,0.177561725313127,0.574890092096664,1.55776328755086,0.929683027679674,0.120859449591622,1.00253235151642,0.0920809889358963,0,0.364182336013434,0.786746489756545,0,0,0,0,0.211103257785751,0,0.680374821106063,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.824328093181778,0.457847324091717,0.082509499920588,0,0.650060246036521,1.6068392984416,0.290012154876366,0.308097234229289,0,0.13783657248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| ||
|short_description=p6@SP110 | |||
}} | }} |
Latest revision as of 06:15, 25 September 2015
Short description: | p6@SP110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SP110_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -6bp_to_ENST00000486146_5end |
EntrezGene: | SP110 |
HGNC: | 5401 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.67e-22 | 136 |
classical monocyte | 2.65e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.65e-21 | 42 |
nongranular leukocyte | 7.29e-20 | 115 |
defensive cell | 4.25e-19 | 48 |
phagocyte | 4.25e-19 | 48 |
hematopoietic lineage restricted progenitor cell | 2.78e-17 | 120 |
myeloid leukocyte | 1.58e-16 | 72 |
hematopoietic stem cell | 5.85e-16 | 168 |
hematopoietic oligopotent progenitor cell | 7.54e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.54e-15 | 161 |
hematopoietic cell | 2.64e-14 | 177 |
monopoietic cell | 1.67e-13 | 59 |
monocyte | 1.67e-13 | 59 |
monoblast | 1.67e-13 | 59 |
promonocyte | 1.67e-13 | 59 |
macrophage dendritic cell progenitor | 8.56e-13 | 61 |
myeloid lineage restricted progenitor cell | 3.77e-12 | 66 |
granulocyte monocyte progenitor cell | 7.60e-12 | 67 |
myeloid cell | 4.24e-09 | 108 |
common myeloid progenitor | 4.24e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-19 | 98 |
blood island | 1.02e-19 | 98 |
hemolymphoid system | 8.46e-18 | 108 |
immune system | 6.54e-11 | 93 |
blood | 1.18e-10 | 15 |
haemolymphatic fluid | 1.18e-10 | 15 |
organism substance | 1.18e-10 | 15 |
bone marrow | 2.31e-10 | 76 |
bone element | 5.20e-09 | 82 |
skeletal element | 3.87e-08 | 90 |
lateral plate mesoderm | 2.20e-07 | 203 |