FFCP PHASE1:Hg19::chr8:116681221..116681236,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7227 | |EntrezGene=7227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |HGNC=12340 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHF7 | |UniProt=Q9UHF7 | ||
|association_with_transcript=0bp_to_ENST00000395715,NM_014112,uc003yny.2,uc003ynz.2,uc010mcy.2_5end | |association_with_transcript=0bp_to_ENST00000395715,NM_014112,uc003yny.2,uc003ynz.2,uc010mcy.2_5end | ||
|cluster_id=chr8:116681221..116681236,- | |||
|coexpression_cluster_id=C2914 | |||
|description=CAGE_peak_3_at_TRPS1_5end | |description=CAGE_peak_3_at_TRPS1_5end | ||
|id=chr8:116681221..116681236,- | |id=chr8:116681221..116681236,- | ||
|ontology_enrichment_celltype=CL:0002057!1.07e-16!42;CL:0002009!3.44e-16!65;CL:0002194!1.99e-15!63;CL:0000576!1.99e-15!63;CL:0000040!1.99e-15!63;CL:0000559!1.99e-15!63;CL:0000860!1.40e-13!45;CL:0000557!1.60e-12!71;CL:0000839!2.79e-11!70;CL:0000766!2.06e-09!76 | |ontology_enrichment_celltype=CL:0002057!1.07e-16!42;CL:0002009!3.44e-16!65;CL:0002194!1.99e-15!63;CL:0000576!1.99e-15!63;CL:0000040!1.99e-15!63;CL:0000559!1.99e-15!63;CL:0000860!1.40e-13!45;CL:0000557!1.60e-12!71;CL:0000839!2.79e-11!70;CL:0000766!2.06e-09!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.49e-18;33!CL:0002057;3.49e-18;33!CL:0000473;3.20e-15;39!CL:0000234;3.20e-15;39!CL:0000576;1.55e-12;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.67e-19,61;CL:0002194,3.06e-18,59;CL:0000576,3.06e-18,59;CL:0000040,3.06e-18,59;CL:0000559,3.06e-18,59;CL:0000473,2.78e-17,48;CL:0000234,2.78e-17,48;CL:0000860,3.63e-17,42;CL:0002057,3.63e-17,42;CL:0000557,7.48e-15,67;CL:0000839,1.96e-13,66;CL:0000766,1.62e-11,72;CL:0002087,3.73e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.94e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.62e-14!57;UBERON:0005068!4.62e-14!57;UBERON:0006241!4.62e-14!57;UBERON:0007135!4.62e-14!57;UBERON:0007023!5.71e-14!115;UBERON:0001474!5.68e-13!86;UBERON:0004765!1.32e-12!101;UBERON:0001434!1.32e-12!101;UBERON:0003080!1.64e-12!42;UBERON:0002616!2.02e-12!59;UBERON:0002371!3.90e-12!80;UBERON:0002780!5.31e-12!41;UBERON:0001890!5.31e-12!41;UBERON:0006240!5.31e-12!41;UBERON:0001017!8.62e-12!82;UBERON:0000062!2.45e-11!511;UBERON:0000955!1.54e-10!69;UBERON:0006238!1.54e-10!69;UBERON:0002020!1.73e-10!34;UBERON:0003528!1.73e-10!34;UBERON:0005743!2.16e-10!86;UBERON:0000073!3.04e-10!94;UBERON:0001016!3.04e-10!94;UBERON:0002791!1.01e-09!33;UBERON:0001893!1.29e-09!34;UBERON:0002390!3.66e-09!102;UBERON:0003061!3.66e-09!102;UBERON:0001869!4.40e-09!32;UBERON:0000153!7.88e-08!129;UBERON:0007811!7.88e-08!129;UBERON:0000033!1.54e-07!123;UBERON:0003075!2.14e-07!86;UBERON:0007284!2.14e-07!86;UBERON:0000956!2.93e-07!25;UBERON:0000203!2.93e-07!25;UBERON:0004121!8.15e-07!169;UBERON:0002619!8.73e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.20e-09;34!UBERON:0002020;1.20e-09;34!UBERON:0002780;1.20e-09;41!UBERON:0001890;1.20e-09;41!UBERON:0002791;2.32e-09;32!UBERON:0001893;3.81e-09;34!UBERON:0001869;5.42e-09;32!UBERON:0000073;5.86e-08;53!UBERON:0002616;5.86e-08;53!UBERON:0000956;8.07e-08;25!UBERON:0000203;8.07e-08;25!UBERON:0002619;2.30e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.72e-15,82;UBERON:0001434,1.34e-14,100;UBERON:0004765,2.96e-14,90;UBERON:0002371,3.15e-14,76;UBERON:0001049,5.87e-14,56;UBERON:0005068,5.87e-14,56;UBERON:0006241,5.87e-14,56;UBERON:0007135,5.87e-14,56;UBERON:0007023,9.43e-14,114;UBERON:0000073,2.50e-12,53;UBERON:0002616,2.50e-12,53;UBERON:0002780,2.52e-12,41;UBERON:0001890,2.52e-12,41;UBERON:0003080,2.52e-12,41;UBERON:0006240,2.52e-12,41;UBERON:0001017,1.18e-11,81;UBERON:0001016,1.62e-11,89;UBERON:0003528,9.14e-11,34;UBERON:0002020,9.14e-11,34;UBERON:0000955,1.63e-10,68;UBERON:0006238,1.63e-10,68;UBERON:0002390,2.05e-10,98;UBERON:0003061,2.05e-10,98;UBERON:0001893,7.28e-10,34;UBERON:0002791,7.58e-10,32;UBERON:0002405,2.38e-09,93;UBERON:0001869,2.57e-09,32;UBERON:0002193,8.29e-08,108;UBERON:0003075,1.90e-07,82;UBERON:0007284,1.90e-07,82;UBERON:0000956,1.95e-07,25;UBERON:0000203,1.95e-07,25;UBERON:0002204,3.68e-07,167;UBERON:0002619,6.00e-07,22 | |||
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| ||
|short_description=p3@TRPS1 | |short_description=p3@TRPS1 | ||
}} | }} |
Latest revision as of 06:42, 25 September 2015
Short description: | p3@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRPS1_5end |
Coexpression cluster: | C2914_CD14_breast_small_spinal_osteosarcoma_skin_Macrophage |
Association with transcript: | 0bp_to_ENST00000395715, NM_014112, uc003yny.2, uc003ynz.2, uc010mcy.2_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | Q9UHF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.67e-19 | 61 |
monopoietic cell | 3.06e-18 | 59 |
monocyte | 3.06e-18 | 59 |
monoblast | 3.06e-18 | 59 |
promonocyte | 3.06e-18 | 59 |
defensive cell | 2.78e-17 | 48 |
phagocyte | 2.78e-17 | 48 |
classical monocyte | 3.63e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.63e-17 | 42 |
granulocyte monocyte progenitor cell | 7.48e-15 | 67 |
myeloid lineage restricted progenitor cell | 1.96e-13 | 66 |
myeloid leukocyte | 1.62e-11 | 72 |
nongranular leukocyte | 3.73e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.72e-15 | 82 |
skeletal system | 1.34e-14 | 100 |
skeletal element | 2.96e-14 | 90 |
bone marrow | 3.15e-14 | 76 |
neural tube | 5.87e-14 | 56 |
neural rod | 5.87e-14 | 56 |
future spinal cord | 5.87e-14 | 56 |
neural keel | 5.87e-14 | 56 |
adult organism | 9.43e-14 | 114 |
regional part of nervous system | 2.50e-12 | 53 |
regional part of brain | 2.50e-12 | 53 |
regional part of forebrain | 2.52e-12 | 41 |
forebrain | 2.52e-12 | 41 |
anterior neural tube | 2.52e-12 | 41 |
future forebrain | 2.52e-12 | 41 |
central nervous system | 1.18e-11 | 81 |
nervous system | 1.62e-11 | 89 |
brain grey matter | 9.14e-11 | 34 |
gray matter | 9.14e-11 | 34 |
brain | 1.63e-10 | 68 |
future brain | 1.63e-10 | 68 |
hematopoietic system | 2.05e-10 | 98 |
blood island | 2.05e-10 | 98 |
telencephalon | 7.28e-10 | 34 |
regional part of telencephalon | 7.58e-10 | 32 |
immune system | 2.38e-09 | 93 |
cerebral hemisphere | 2.57e-09 | 32 |
hemolymphoid system | 8.29e-08 | 108 |
neural plate | 1.90e-07 | 82 |
presumptive neural plate | 1.90e-07 | 82 |
cerebral cortex | 1.95e-07 | 25 |
pallium | 1.95e-07 | 25 |
musculoskeletal system | 3.68e-07 | 167 |
regional part of cerebral cortex | 6.00e-07 | 22 |