FFCP PHASE1:Hg19::chr17:46671504..46671541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3215 | |EntrezGene=3215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5116 | |HGNC=5116 | ||
|TSSclassifier=strong | |||
|UniProt=P09067 | |UniProt=P09067 | ||
|association_with_transcript=-181bp_to_ENST00000239151_5end | |association_with_transcript=-181bp_to_ENST00000239151_5end | ||
|cluster_id=chr17:46671504..46671541,- | |||
|description=CAGE_peak_2_at_HOXB5_5end | |description=CAGE_peak_2_at_HOXB5_5end | ||
|id=chr17:46671504..46671541,- | |id=chr17:46671504..46671541,- | ||
|ontology_enrichment_celltype=CL:0002579;5.19e-13;3!CL:0002554;5.18e-10;2!CL:0002598;1.37e-09;2!CL:1000449;2.78e-09;15!CL:0002334;2.66e-08;12!CL:1000497;4.07e-08;17!CL:0002518;4.07e-08;17!CL:1000507;8.86e-07;10!CL:1000494;8.86e-07;10 | |ontology_enrichment_celltype=CL:1000449!7.49e-12!16;CL:1000497!4.18e-10!18;CL:0002518!4.18e-10!18;CL:1000507!8.00e-10!12;CL:1000494!8.00e-10!12;CL:0002681!6.83e-09!13;CL:0002584!6.83e-09!13;CL:0002334!9.37e-08!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0002579;5.19e-13;3!CL:0002554;5.18e-10;2!CL:0002598;1.37e-09;2!CL:1000449;2.78e-09;15!CL:0002334;2.66e-08;12!CL:1000497;4.07e-08;17!CL:0002518;4.07e-08;17!CL:1000507;8.86e-07;10!CL:1000494;8.86e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.52e-13,3;CL:0002554,4.98e-10,2;CL:0002598,1.46e-09,2;CL:1000449,3.02e-09,15;CL:0002334,2.92e-08,12;CL:1000497,4.37e-08,17;CL:0002518,4.37e-08,17;CL:0000322,9.91e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.31e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0006947;9.89e-14;3!UBERON:0004054;9.89e-14;3!UBERON:0005904;2.08e-10;4!UBERON:0002113;1.29e-09;24!UBERON:0011143;1.29e-09;24!UBERON:0006555;2.78e-09;15!UBERON:0004819;2.78e-09;15!UBERON:0001285;2.78e-09;15!UBERON:0007684;2.78e-09;15!UBERON:0004175;6.91e-09;21!UBERON:0004905;1.27e-08;8!UBERON:0000982;1.27e-08;8!UBERON:0004770;1.27e-08;8!UBERON:0011135;2.71e-08;5!UBERON:0002216;2.71e-08;5!UBERON:0011134;2.71e-08;5!UBERON:0002209;2.71e-08;5!UBERON:0002213;2.71e-08;5!UBERON:0007844;2.71e-08;5!UBERON:0011138;2.71e-08;5!UBERON:0001130;2.71e-08;5!UBERON:0001066;2.71e-08;5!UBERON:0001468;2.71e-08;5!UBERON:0000489;9.63e-08;29!UBERON:0002417;1.66e-07;58!UBERON:0000916;1.66e-07;58!UBERON:0004457;1.91e-07;9!UBERON:0000042;1.91e-07;9!UBERON:0002067;1.91e-07;9!UBERON:0006554;1.92e-07;30!UBERON:0001008;1.92e-07;30!UBERON:0000058;5.66e-07;10!UBERON:0004211;8.86e-07;10!UBERON:0009773;8.86e-07;10!UBERON:0001231;8.86e-07;10!UBERON:0004810;8.86e-07;10 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!8.24e-15!216;UBERON:0003887!1.21e-14!21;UBERON:0000080!2.99e-14!18;UBERON:0002120!2.99e-14!18;UBERON:0004875!2.99e-14!18;UBERON:0005721!2.99e-14!18;UBERON:0005754!2.99e-14!18;UBERON:0007297!2.99e-14!18;UBERON:0000489!5.15e-13!32;UBERON:0006555!5.90e-13!17;UBERON:0005103!5.90e-13!17;UBERON:0000083!5.90e-13!17;UBERON:0009201!5.90e-13!17;UBERON:0004819!5.90e-13!17;UBERON:0006553!5.90e-13!17;UBERON:0003074!5.90e-13!17;UBERON:0003060!5.90e-13!17;UBERON:0000058!6.52e-13!26;UBERON:0005177!9.95e-13!107;UBERON:0004876!2.39e-12!20;UBERON:0002113!2.79e-12!27;UBERON:0003918!2.79e-12!27;UBERON:0005095!2.79e-12!27;UBERON:0007687!2.79e-12!27;UBERON:0004211!7.49e-12!16;UBERON:0001285!7.49e-12!16;UBERON:0007684!7.49e-12!16;UBERON:0003220!7.49e-12!16;UBERON:0004208!7.49e-12!16;UBERON:0000464!9.71e-12!104;UBERON:0002417!1.22e-11!61;UBERON:0000916!1.22e-11!61;UBERON:0009569!3.32e-11!113;UBERON:0000466!7.97e-11!126;UBERON:0003886!8.21e-11!63;UBERON:0009773!8.00e-10!12;UBERON:0001231!8.00e-10!12;UBERON:0004810!8.00e-10!12;UBERON:0005256!2.58e-09!143;UBERON:0001225!6.83e-09!13;UBERON:0008987!6.83e-09!13;UBERON:0002553!7.31e-09!70;UBERON:0003104!7.71e-09!238;UBERON:0009142!7.71e-09!238;UBERON:0005172!2.30e-08!55;UBERON:0005173!2.30e-08!55;UBERON:0000353!8.70e-08!17;UBERON:0006554!1.10e-07!44;UBERON:0001008!2.18e-07!45;UBERON:0003064!6.52e-07!37;UBERON:0001851!9.74e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.89e-14;3!UBERON:0004054;9.89e-14;3!UBERON:0005904;2.08e-10;4!UBERON:0002113;1.29e-09;24!UBERON:0011143;1.29e-09;24!UBERON:0006555;2.78e-09;15!UBERON:0004819;2.78e-09;15!UBERON:0001285;2.78e-09;15!UBERON:0007684;2.78e-09;15!UBERON:0004175;6.91e-09;21!UBERON:0004905;1.27e-08;8!UBERON:0000982;1.27e-08;8!UBERON:0004770;1.27e-08;8!UBERON:0011135;2.71e-08;5!UBERON:0002216;2.71e-08;5!UBERON:0011134;2.71e-08;5!UBERON:0002209;2.71e-08;5!UBERON:0002213;2.71e-08;5!UBERON:0007844;2.71e-08;5!UBERON:0011138;2.71e-08;5!UBERON:0001130;2.71e-08;5!UBERON:0001066;2.71e-08;5!UBERON:0001468;2.71e-08;5!UBERON:0000489;9.63e-08;29!UBERON:0002417;1.66e-07;58!UBERON:0000916;1.66e-07;58!UBERON:0004457;1.91e-07;9!UBERON:0000042;1.91e-07;9!UBERON:0002067;1.91e-07;9!UBERON:0006554;1.92e-07;30!UBERON:0001008;1.92e-07;30!UBERON:0000058;5.66e-07;10!UBERON:0004211;8.86e-07;10!UBERON:0009773;8.86e-07;10!UBERON:0001231;8.86e-07;10!UBERON:0004810;8.86e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.47e-14,26;UBERON:0003918,8.47e-14,26;UBERON:0011143,8.47e-14,26;UBERON:0005095,8.47e-14,26;UBERON:0007687,8.47e-14,26;UBERON:0002417,1.02e-13,60;UBERON:0000916,1.02e-13,60;UBERON:0006947,1.40e-13,3;UBERON:0004054,1.40e-13,3;UBERON:0009569,1.24e-12,112;UBERON:0006555,1.62e-11,16;UBERON:0004819,1.62e-11,16;UBERON:0000489,2.89e-11,31;UBERON:0005177,2.55e-10,101;UBERON:0005904,2.68e-10,4;UBERON:0000058,4.08e-10,19;UBERON:0005172,6.23e-10,54;UBERON:0005173,6.23e-10,54;UBERON:0004211,3.02e-09,15;UBERON:0009773,3.02e-09,15;UBERON:0001231,3.02e-09,15;UBERON:0001285,3.02e-09,15;UBERON:0007684,3.02e-09,15;UBERON:0004208,3.02e-09,15;UBERON:0002100,7.74e-09,199;UBERON:0004905,1.50e-08,8;UBERON:0000982,1.50e-08,8;UBERON:0004770,1.50e-08,8;UBERON:0011135,2.49e-08,5;UBERON:0002216,2.49e-08,5;UBERON:0011134,2.49e-08,5;UBERON:0002209,2.49e-08,5;UBERON:0002213,2.49e-08,5;UBERON:0005856,2.49e-08,5;UBERON:0005866,2.49e-08,5;UBERON:0005863,2.49e-08,5;UBERON:0007844,2.49e-08,5;UBERON:0011138,2.49e-08,5;UBERON:0001130,2.49e-08,5;UBERON:0001066,2.49e-08,5;UBERON:0001468,2.49e-08,5;UBERON:0003104,3.24e-08,160;UBERON:0009142,3.24e-08,160;UBERON:0000080,1.28e-07,9;UBERON:0002120,1.28e-07,9;UBERON:0004875,1.28e-07,9;UBERON:0005721,1.28e-07,9;UBERON:0005754,1.28e-07,9;UBERON:0007297,1.28e-07,9;UBERON:0002067,1.50e-07,9;UBERON:0004016,1.50e-07,9;UBERON:0010083,1.50e-07,9;UBERON:0004175,2.49e-07,25;UBERON:0006554,8.31e-07,47;UBERON:0003688,8.42e-07,6;UBERON:0002358,8.42e-07,6;UBERON:0003684,8.42e-07,6;UBERON:0001178,8.42e-07,6;UBERON:0004821,9.91e-07,3;UBERON:0003215,9.91e-07,3;UBERON:0010368,9.91e-07,3;UBERON:0009911,9.91e-07,3;UBERON:0002299,9.91e-07,3;UBERON:0006524,9.91e-07,3;UBERON:0008874,9.91e-07,3;UBERON:0002169,9.91e-07,3;UBERON:0004894,9.91e-07,3 | |||
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| ||
|short_description=p2@HOXB5 | |short_description=p2@HOXB5 | ||
}} | }} |
Latest revision as of 07:17, 25 September 2015
Short description: | p2@HOXB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXB5_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_ENST00000239151_5end |
EntrezGene: | HOXB5 |
HGNC: | 5116 |
UniProt: | P09067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.52e-13 | 3 |
fibroblast of lymphatic vessel | 4.98e-10 | 2 |
bronchial smooth muscle cell | 1.46e-09 | 2 |
epithelial cell of nephron | 3.02e-09 | 15 |
preadipocyte | 2.92e-08 | 12 |
kidney cell | 4.37e-08 | 17 |
kidney epithelial cell | 4.37e-08 | 17 |
pneumocyte | 9.91e-07 | 3 |