FFCP PHASE1:Mm9::chr4:43597258..43597265,-: Difference between revisions
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{{FFCP|EntrezGene=100039672|HGNC=|MCL_coexpression_id=1423|UniProt=B1AWI6|association_with_transcript=100bp_to_ENSMUST00000107884,NM_001099314,uc008sql.1_5end|description=CAGE_peak_1_at_Msmp_5end|id=chr4:43597258..43597265,-|ontology_enrichment_celltype=CL:0002453!2.75e-07!8|ontology_enrichment_celltype_v019_2=CL:0002605,2.38e-26,2;CL:0002604,2.38e-26,2;CL:0000128,1.78e-09,6;CL:0000126,1.78e-09,6;CL:0000127,1.78e-09,6;CL:0002453,2.46e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000981,9.26e-29,4;UBERON:0003608,9.26e-29,4;UBERON:0003826,9.26e-29,4;UBERON:0008202,9.26e-29,4;UBERON:0004381,9.26e-29,4;UBERON:0007273,9.26e-29,4;UBERON:0010912,9.26e-29,4;UBERON:0002513,9.26e-29,4;UBERON:0004375,9.26e-29,4;UBERON:0010740,9.26e-29,4;UBERON:0010363,9.26e-29,4;UBERON:0003860,9.26e-29,4;UBERON:0002428,9.26e-29,4;UBERON:0010742,9.26e-29,4;UBERON:0002495,9.26e-29,4;UBERON:0003464,9.26e-29,4;UBERON:0003606,9.26e-29,4;UBERON:0005893,9.26e-29,4;UBERON:0009749,9.26e-29,4;UBERON:0010712,9.26e-29,4;UBERON:0010886,9.26e-29,4;UBERON:0005254,9.26e-29,4;UBERON:0010885,9.26e-29,4;UBERON:0010881,9.26e-29,4;UBERON:0010882,9.26e-29,4;UBERON:0007844,9.26e-29,4;UBERON:0001441,9.26e-29,4;UBERON:0011249,9.26e-29,4;UBERON:0002091,9.26e-29,4;UBERON:0003285,9.26e-29,4;UBERON:0004288,9.26e-29,4;UBERON:0010129,9.26e-29,4;UBERON:0006234,9.26e-29,4;UBERON:0005418,3.46e-23,5;UBERON:0002472,3.46e-23,5;UBERON:0008784,3.46e-23,5;UBERON:0006058,3.46e-23,5;UBERON:0004709,3.46e-23,5;UBERON:0002529,3.46e-23,5;UBERON:0010538,3.46e-23,5;UBERON:0005420,3.46e-23,5;UBERON:0010758,3.46e-23,5;UBERON:0000978,3.46e-23,5;UBERON:0002103,3.46e-23,5;UBERON:0000376,3.46e-23,5;UBERON:0000154,3.46e-23,5;UBERON:0010709,3.46e-23,5;UBERON:0005730,3.46e-23,5;UBERON:0000075,1.83e-19,6;UBERON:0005856,1.83e-19,6;UBERON:0005866,1.83e-19,6;UBERON:0005863,1.83e-19,6;UBERON:0000026,4.43e-17,12;UBERON:0004708,4.43e-17,12;UBERON:0002101,4.43e-17,12;UBERON:0004357,4.43e-17,12;UBERON:0004347,4.43e-17,12;UBERON:0005732,4.43e-17,12;UBERON:0005733,4.43e-17,12;UBERON:0010707,8.25e-16,13;UBERON:0003102,1.51e-09,22;UBERON:0001954,2.96e-08,7;UBERON:0003022,2.96e-08,7;UBERON:0002421,2.96e-08,7;UBERON:0000349,2.96e-08,7;UBERON:0002600,2.96e-08,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,6.15121311656521,3.30530828426282,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,5.82360659810673,2.65009822152472,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0.348252166522167,2.26360350048738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.578719832943424,0,0,0.214871054048298,1.14772999241306,0,0.927471342481686|short_description=p1@Msmp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100039672 | |||
|HGNC= | |||
|MCL_coexpression_id=1423 | |||
|TSSclassifier=NA | |||
|UniProt=B1AWI6 | |||
|association_with_transcript=100bp_to_ENSMUST00000107884,NM_001099314,uc008sql.1_5end | |||
|cluster_id=chr4:43597258..43597265,- | |||
|description=CAGE_peak_1_at_Msmp_5end | |||
|id=chr4:43597258..43597265,- | |||
|ontology_enrichment_celltype=CL:0002453!2.75e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.38e-26,2;CL:0002604,2.38e-26,2;CL:0000128,1.78e-09,6;CL:0000126,1.78e-09,6;CL:0000127,1.78e-09,6;CL:0002453,2.46e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000981,9.26e-29,4;UBERON:0003608,9.26e-29,4;UBERON:0003826,9.26e-29,4;UBERON:0008202,9.26e-29,4;UBERON:0004381,9.26e-29,4;UBERON:0007273,9.26e-29,4;UBERON:0010912,9.26e-29,4;UBERON:0002513,9.26e-29,4;UBERON:0004375,9.26e-29,4;UBERON:0010740,9.26e-29,4;UBERON:0010363,9.26e-29,4;UBERON:0003860,9.26e-29,4;UBERON:0002428,9.26e-29,4;UBERON:0010742,9.26e-29,4;UBERON:0002495,9.26e-29,4;UBERON:0003464,9.26e-29,4;UBERON:0003606,9.26e-29,4;UBERON:0005893,9.26e-29,4;UBERON:0009749,9.26e-29,4;UBERON:0010712,9.26e-29,4;UBERON:0010886,9.26e-29,4;UBERON:0005254,9.26e-29,4;UBERON:0010885,9.26e-29,4;UBERON:0010881,9.26e-29,4;UBERON:0010882,9.26e-29,4;UBERON:0007844,9.26e-29,4;UBERON:0001441,9.26e-29,4;UBERON:0011249,9.26e-29,4;UBERON:0002091,9.26e-29,4;UBERON:0003285,9.26e-29,4;UBERON:0004288,9.26e-29,4;UBERON:0010129,9.26e-29,4;UBERON:0006234,9.26e-29,4;UBERON:0005418,3.46e-23,5;UBERON:0002472,3.46e-23,5;UBERON:0008784,3.46e-23,5;UBERON:0006058,3.46e-23,5;UBERON:0004709,3.46e-23,5;UBERON:0002529,3.46e-23,5;UBERON:0010538,3.46e-23,5;UBERON:0005420,3.46e-23,5;UBERON:0010758,3.46e-23,5;UBERON:0000978,3.46e-23,5;UBERON:0002103,3.46e-23,5;UBERON:0000376,3.46e-23,5;UBERON:0000154,3.46e-23,5;UBERON:0010709,3.46e-23,5;UBERON:0005730,3.46e-23,5;UBERON:0000075,1.83e-19,6;UBERON:0005856,1.83e-19,6;UBERON:0005866,1.83e-19,6;UBERON:0005863,1.83e-19,6;UBERON:0000026,4.43e-17,12;UBERON:0004708,4.43e-17,12;UBERON:0002101,4.43e-17,12;UBERON:0004357,4.43e-17,12;UBERON:0004347,4.43e-17,12;UBERON:0005732,4.43e-17,12;UBERON:0005733,4.43e-17,12;UBERON:0010707,8.25e-16,13;UBERON:0003102,1.51e-09,22;UBERON:0001954,2.96e-08,7;UBERON:0003022,2.96e-08,7;UBERON:0002421,2.96e-08,7;UBERON:0000349,2.96e-08,7;UBERON:0002600,2.96e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,6.15121311656521,3.30530828426282,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,5.82360659810673,2.65009822152472,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0.348252166522167,2.26360350048738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.578719832943424,0,0,0.214871054048298,1.14772999241306,0,0.927471342481686 | |||
|short_description=p1@Msmp | |||
}} |
Latest revision as of 00:24, 27 September 2015
Short description: | p1@Msmp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Msmp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1423 |
Association with transcript: | 100bp_to_ENSMUST00000107884, NM_001099314, uc008sql.1_5end |
EntrezGene: | Msmp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.38e-26 | 2 |
astrocyte of the hippocampus | 2.38e-26 | 2 |
oligodendrocyte | 1.78e-09 | 6 |
macroglial cell | 1.78e-09 | 6 |
astrocyte | 1.78e-09 | 6 |
oligodendrocyte precursor cell | 2.46e-07 | 8 |