FFCP PHASE1:Mm9::chr9:76893457..76893477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26944 | |EntrezGene=26944 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=412 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XG7 | |UniProt=Q91XG7 | ||
|association_with_transcript=110bp_to_uc009qte.2_5end | |||
|cluster_id=chr9:76893457..76893477,- | |||
|description=CAGE_peak_3_at_Tinag_5end | |||
|id=chr9:76893457..76893477,- | |||
|ontology_enrichment_celltype=CL:0002563!2.22e-09!9;CL:0002251!2.22e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.01e-17,9;CL:0002251,1.01e-17,9;CL:0000239,8.96e-12,6;CL:0000677,8.96e-12,6;CL:0000584,8.96e-12,6;CL:0000075,5.68e-10,7;CL:0002076,7.69e-10,15;CL:0000066,1.32e-09,25;CL:0002250,1.52e-07,3;CL:0000682,4.70e-07,3;CL:0000223,6.57e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.15e-28!43;UBERON:0005409!2.53e-23!59;UBERON:0001007!5.25e-16!128;UBERON:0001555!5.25e-16!128;UBERON:0007026!5.25e-16!128;UBERON:0004119!2.14e-15!130;UBERON:0000925!2.14e-15!130;UBERON:0006595!2.14e-15!130;UBERON:0004921!7.03e-15!126;UBERON:0004185!7.03e-15!126;UBERON:0000344!5.44e-14!15;UBERON:0001242!1.05e-12!13;UBERON:0000060!1.05e-12!13;UBERON:0001262!1.05e-12!13;UBERON:0004786!1.05e-12!13;UBERON:0003350!2.22e-09!9;UBERON:0004808!2.22e-09!9;UBERON:0001277!2.22e-09!9;UBERON:0002108!2.72e-09!16;UBERON:0002048!5.97e-08!14;UBERON:0000117!5.97e-08!14;UBERON:0000171!5.97e-08!14;UBERON:0000170!5.97e-08!14;UBERON:0005597!5.97e-08!14;UBERON:0000118!5.97e-08!14;UBERON:0005178!1.22e-07!17;UBERON:0005181!1.22e-07!17;UBERON:0002224!1.22e-07!17;UBERON:0000915!1.22e-07!17;UBERON:0008947!1.22e-07!17;UBERON:0003258!1.22e-07!17;UBERON:0004923!1.65e-07!24;UBERON:0000485!4.49e-07!11;UBERON:0001045!9.74e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.12e-38,31;UBERON:0000344,2.82e-27,15;UBERON:0005409,7.48e-27,47;UBERON:0001242,1.30e-24,13;UBERON:0001262,1.30e-24,13;UBERON:0004786,1.30e-24,13;UBERON:0003350,1.01e-17,9;UBERON:0004808,1.01e-17,9;UBERON:0001277,1.01e-17,9;UBERON:0004923,1.42e-15,24;UBERON:0000485,3.91e-14,11;UBERON:0001007,6.25e-14,116;UBERON:0001555,6.25e-14,116;UBERON:0007026,6.25e-14,116;UBERON:0004119,1.52e-13,118;UBERON:0000925,1.52e-13,118;UBERON:0006595,1.52e-13,118;UBERON:0004921,2.31e-12,114;UBERON:0002108,1.08e-08,4;UBERON:0001264,4.23e-08,12;UBERON:0000331,6.77e-07,3;UBERON:0002116,6.77e-07,3;UBERON:0001204,6.77e-07,3;UBERON:0001168,6.77e-07,3 | |||
|phase1_expression=0,3.14077866875425,2.72999543633722,3.0246421130683,3.00537437967808,3.86122325397347,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,4.59385571292016,2.15380998079537,4.52489588640367,4.3705386474966,2.01624103807945,4.43461021310609,0,0,0,8.95440021228951,3.82339684324532,9.80012910059372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0.232236671860439,1.03093969057675,1.61346819698674,1.77902435075896,0.380451252225118,2.84717436926707,0.988193728344065,0.754005626400808,3.18330355265841,1.9496408711912,5.39291645192533,4.32276099749388,3.78368419183298,0,0,0,0.814605311381257,0.193952487167626,0.0701358198903186,1.45444035385792,0.738050739898011,0.941992367048249,0.863780147452604,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,2.93336957595647,3.90413697282933,6.57132695207806,6.53274404023081,1.90434912708811,0.780534591431195,0.945810864637146,1.10732344824387,0.797273843287435,0.491589944147214,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,1.32745138339963,1.21390318077491,2.41858845571801,2.26326095707078,0,2.15204603560749,0.516856586336442,1.09060118843252,1.06949213515416,0.632073515871632,2.10837217149998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,1.62655573701479,0.648032044930808,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,4.40690909192096,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,0,0.50695859978048,0.188626341386076,0.187283014939765,0.512201219238954,0.229741875822453,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0,0.70990322463735,0.238436189947321,0.581385666529314,0.0941093804153306,0.25384382367503,0.365855945745545,0.263069711437843,0.543216455383447,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,3.14077866875425,2.72999543633722,3.0246421130683,3.00537437967808,3.86122325397347,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,4.59385571292016,2.15380998079537,4.52489588640367,4.3705386474966,2.01624103807945,4.43461021310609,0,0,0,8.95440021228951,3.82339684324532,9.80012910059372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.611036183101898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0.232236671860439,1.03093969057675,1.61346819698674,1.77902435075896,0.380451252225118,2.84717436926707,0.988193728344065,0.754005626400808,3.18330355265841,1.9496408711912,5.39291645192533,4.32276099749388,3.78368419183298,0,0,0,0.814605311381257,0.193952487167626,0.0701358198903186,1.45444035385792,0.738050739898011,0.941992367048249,0.863780147452604,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,2.93336957595647,3.90413697282933,6.57132695207806,6.53274404023081,1.90434912708811,0.780534591431195,0.945810864637146,1.10732344824387,0.797273843287435,0.491589944147214,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,1.32745138339963,1.21390318077491,2.41858845571801,2.26326095707078,0,2.15204603560749,0.516856586336442,1.09060118843252,1.06949213515416,0.632073515871632,2.10837217149998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,1.62655573701479,0.648032044930808,0.418176592028937,0,0.269728692769641,0.0826534557253359,0,4.40690909192096,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,0,0.50695859978048,0.188626341386076,0.187283014939765,0.512201219238954,0.229741875822453,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0,0.70990322463735,0.238436189947321,0.581385666529314,0.0941093804153306,0.25384382367503,0.365855945745545,0.263069711437843,0.543216455383447,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p3@Tinag | |||
}} | }} |
Latest revision as of 03:44, 27 September 2015
Short description: | p3@Tinag |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tinag_5end |
Coexpression cluster: | MCL_coexpression_mm9:412 |
Association with transcript: | 110bp_to_uc009qte.2_5end |
EntrezGene: | Tinag |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.01e-17 | 9 |
epithelial cell of alimentary canal | 1.01e-17 | 9 |
brush border epithelial cell | 8.96e-12 | 6 |
gut absorptive cell | 8.96e-12 | 6 |
enterocyte | 8.96e-12 | 6 |
columnar/cuboidal epithelial cell | 5.68e-10 | 7 |
endo-epithelial cell | 7.69e-10 | 15 |
epithelial cell | 1.32e-09 | 25 |
intestinal crypt stem cell | 1.52e-07 | 3 |
M cell of gut | 4.70e-07 | 3 |
endodermal cell | 6.57e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.12e-38 | 31 |
mucosa | 2.82e-27 | 15 |
gastrointestinal system | 7.48e-27 | 47 |
intestinal mucosa | 1.30e-24 | 13 |
wall of intestine | 1.30e-24 | 13 |
gastrointestinal system mucosa | 1.30e-24 | 13 |
epithelium of mucosa | 1.01e-17 | 9 |
gastrointestinal system epithelium | 1.01e-17 | 9 |
intestinal epithelium | 1.01e-17 | 9 |
organ component layer | 1.42e-15 | 24 |
simple columnar epithelium | 3.91e-14 | 11 |
digestive system | 6.25e-14 | 116 |
digestive tract | 6.25e-14 | 116 |
primitive gut | 6.25e-14 | 116 |
endoderm-derived structure | 1.52e-13 | 118 |
endoderm | 1.52e-13 | 118 |
presumptive endoderm | 1.52e-13 | 118 |
subdivision of digestive tract | 2.31e-12 | 114 |
small intestine | 1.08e-08 | 4 |
pancreas | 4.23e-08 | 12 |
ileal mucosa | 6.77e-07 | 3 |
ileum | 6.77e-07 | 3 |
mucosa of small intestine | 6.77e-07 | 3 |
wall of small intestine | 6.77e-07 | 3 |