FFCP PHASE1:Mm9::chr9:98936098..98936137,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=382097 | |EntrezGene=382097 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=Q1RME4 | |UniProt=Q1RME4 | ||
|association_with_transcript=0bp_to_ENSMUST00000076730,NM_001080776,uc009rdu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000076730,NM_001080776,uc009rdu.1_5end | ||
|cluster_id=chr9:98936098..98936137,- | |||
|description=CAGE_peak_1_at_Gm1123_5end | |description=CAGE_peak_1_at_Gm1123_5end | ||
|id=chr9:98936098..98936137,- | |id=chr9:98936098..98936137,- | ||
|ontology_enrichment_celltype=CL:0002563!3.85e-12!9;CL:0002251!3.85e-12!9;CL:0000239!2.08e-08!6;CL:0000677!2.08e-08!6;CL:0000212!2.08e-08!6;CL:0000584!2.08e-08!6;CL:0000075!4.99e-07!7 | |ontology_enrichment_celltype=CL:0002563!3.85e-12!9;CL:0002251!3.85e-12!9;CL:0000239!2.08e-08!6;CL:0000677!2.08e-08!6;CL:0000212!2.08e-08!6;CL:0000584!2.08e-08!6;CL:0000075!4.99e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.33e-17,9;CL:0002251,1.33e-17,9;CL:0000239,6.02e-12,6;CL:0000677,6.02e-12,6;CL:0000584,6.02e-12,6;CL:0000075,4.06e-10,7;CL:0002076,8.95e-10,15;CL:0000066,1.54e-09,25;CL:0002250,3.10e-07,3;CL:0000682,5.15e-07,3;CL:0000223,7.32e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.34e-22!43;UBERON:0000344!3.20e-20!15;UBERON:0005409!1.88e-19!59;UBERON:0001242!1.37e-17!13;UBERON:0000060!1.37e-17!13;UBERON:0001262!1.37e-17!13;UBERON:0004786!1.37e-17!13;UBERON:0003350!3.85e-12!9;UBERON:0004808!3.85e-12!9;UBERON:0001277!3.85e-12!9;UBERON:0004923!1.03e-10!24;UBERON:0000485!1.83e-09!11 | |ontology_enrichment_uberon=UBERON:0000160!2.34e-22!43;UBERON:0000344!3.20e-20!15;UBERON:0005409!1.88e-19!59;UBERON:0001242!1.37e-17!13;UBERON:0000060!1.37e-17!13;UBERON:0001262!1.37e-17!13;UBERON:0004786!1.37e-17!13;UBERON:0003350!3.85e-12!9;UBERON:0004808!3.85e-12!9;UBERON:0001277!3.85e-12!9;UBERON:0004923!1.03e-10!24;UBERON:0000485!1.83e-09!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.93e-49,31;UBERON:0005409,6.52e-37,47;UBERON:0000344,6.89e-30,15;UBERON:0001242,7.00e-26,13;UBERON:0001262,7.00e-26,13;UBERON:0004786,7.00e-26,13;UBERON:0003350,1.33e-17,9;UBERON:0004808,1.33e-17,9;UBERON:0001277,1.33e-17,9;UBERON:0004923,4.01e-17,24;UBERON:0000485,4.86e-14,11;UBERON:0001007,3.07e-12,116;UBERON:0001555,3.07e-12,116;UBERON:0007026,3.07e-12,116;UBERON:0004119,6.87e-12,118;UBERON:0000925,6.87e-12,118;UBERON:0006595,6.87e-12,118;UBERON:0004921,1.91e-10,114;UBERON:0002108,2.15e-09,4;UBERON:0000331,8.96e-08,3;UBERON:0002116,8.96e-08,3;UBERON:0001204,8.96e-08,3;UBERON:0001168,8.96e-08,3 | |||
|phase1_expression=0,83.0561470181679,73.7098767811048,73.8012675588665,85.152274090879,189.535697988524,169.135551791161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,178.871528683029,214.956496359938,129.20219192588,175.750894432902,156.432114929955,647.409790087866,576.644936890722,330.821921897715,0,0,0,167.533939455739,174.712612271775,185.589944842494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3928870897496,0,0,0,0,0,0,0,0,0,0,30.2587281255509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.325775528893,0,0,227.612236190855,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,220.058909467209,134.340887865081,0,0,3.60828891701861,14.5212137728807,20.6811580775729,35.1917408308234,117.683207263039,66.0442808443284,28.1495433856302,34.4194696631191,26.5151158482003,103.364231995235,140.273594368677,160.109583696511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78656196771952,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,82.7805576028776,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72808545314882,0.418176592028937,3.05707589244649,0,0.0826534557253359,0,41.2175615067901,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.888986911206461,1.44224540067226,0.962757628775446,0,1.01391719956096,0.565879024158229,0.280924522409647,1.02440243847791,0.34461281373368,0.952587382566147,0.695305955669133,0.578727661391115,0.412085900803307,0.735994600671987,0.342869252385415,0.177475806159338,0.238436189947321,0.872078499793971,0.564656282491984,1.18460451048347,0.73171189149109,0.263069711437843,0.543216455383447,0,0.711810108745045,0.591026894253381,0,1.23949472948773,1.35034627686799,0,3.27504251823572,2.57845264857958,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,83.0561470181679,73.7098767811048,73.8012675588665,85.152274090879,189.535697988524,169.135551791161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,178.871528683029,214.956496359938,129.20219192588,175.750894432902,156.432114929955,647.409790087866,576.644936890722,330.821921897715,0,0,0,167.533939455739,174.712612271775,185.589944842494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3928870897496,0,0,0,0,0,0,0,0,0,0,30.2587281255509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.325775528893,0,0,227.612236190855,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,220.058909467209,134.340887865081,0,0,3.60828891701861,14.5212137728807,20.6811580775729,35.1917408308234,117.683207263039,66.0442808443284,28.1495433856302,34.4194696631191,26.5151158482003,103.364231995235,140.273594368677,160.109583696511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78656196771952,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,82.7805576028776,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72808545314882,0.418176592028937,3.05707589244649,0,0.0826534557253359,0,41.2175615067901,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.888986911206461,1.44224540067226,0.962757628775446,0,1.01391719956096,0.565879024158229,0.280924522409647,1.02440243847791,0.34461281373368,0.952587382566147,0.695305955669133,0.578727661391115,0.412085900803307,0.735994600671987,0.342869252385415,0.177475806159338,0.238436189947321,0.872078499793971,0.564656282491984,1.18460451048347,0.73171189149109,0.263069711437843,0.543216455383447,0,0.711810108745045,0.591026894253381,0,1.23949472948773,1.35034627686799,0,3.27504251823572,2.57845264857958,0.191288332068843,0,0.231867835620421 | ||
|short_description=p1@Gm1123 | |short_description=p1@Gm1123 | ||
}} | }} |
Latest revision as of 07:35, 27 September 2015
Short description: | p1@Gm1123 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm1123_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 0bp_to_ENSMUST00000076730, NM_001080776, uc009rdu.1_5end |
EntrezGene: | Gm1123 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.33e-17 | 9 |
epithelial cell of alimentary canal | 1.33e-17 | 9 |
brush border epithelial cell | 6.02e-12 | 6 |
gut absorptive cell | 6.02e-12 | 6 |
enterocyte | 6.02e-12 | 6 |
columnar/cuboidal epithelial cell | 4.06e-10 | 7 |
endo-epithelial cell | 8.95e-10 | 15 |
epithelial cell | 1.54e-09 | 25 |
intestinal crypt stem cell | 3.10e-07 | 3 |
M cell of gut | 5.15e-07 | 3 |
endodermal cell | 7.32e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.93e-49 | 31 |
gastrointestinal system | 6.52e-37 | 47 |
mucosa | 6.89e-30 | 15 |
intestinal mucosa | 7.00e-26 | 13 |
wall of intestine | 7.00e-26 | 13 |
gastrointestinal system mucosa | 7.00e-26 | 13 |
epithelium of mucosa | 1.33e-17 | 9 |
gastrointestinal system epithelium | 1.33e-17 | 9 |
intestinal epithelium | 1.33e-17 | 9 |
organ component layer | 4.01e-17 | 24 |
simple columnar epithelium | 4.86e-14 | 11 |
digestive system | 3.07e-12 | 116 |
digestive tract | 3.07e-12 | 116 |
primitive gut | 3.07e-12 | 116 |
endoderm-derived structure | 6.87e-12 | 118 |
endoderm | 6.87e-12 | 118 |
presumptive endoderm | 6.87e-12 | 118 |
subdivision of digestive tract | 1.91e-10 | 114 |
small intestine | 2.15e-09 | 4 |
ileal mucosa | 8.96e-08 | 3 |
ileum | 8.96e-08 | 3 |
mucosa of small intestine | 8.96e-08 | 3 |
wall of small intestine | 8.96e-08 | 3 |