FF:10417-106C3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON: | |DRA_sample_Accession=CAGE@SAMD00005399 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX007982;DRR008854;DRZ000279;DRZ001664;DRZ011629;DRZ013014 | ||
|ancestors_in_disease_facet=DOID:0050686,DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002108,UBERON:0000160,UBERON:0002394,UBERON:0004913,UBERON:0000058,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0004111,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003703,UBERON:0003928,UBERON:0010317,UBERON:0001555,UBERON:0002114,UBERON:0005409,UBERON:0002294,UBERON:0001173,UBERON:0002423,UBERON:0001174,UBERON:0004914 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:305,DOID:299,DOID:3119,DOID:4929 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100167 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0101120 | |fonse_cell_line=FF:0101120 | ||
|fonse_cell_line_closure=FF:0101120 | |fonse_cell_line_closure=FF:0101120 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/papillotubular%2520adenocarcinoma%2520cell%2520line%253aTGBC18TKB.CNhs10734.10417-106C3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/papillotubular%2520adenocarcinoma%2520cell%2520line%253aTGBC18TKB.CNhs10734.10417-106C3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/papillotubular%2520adenocarcinoma%2520cell%2520line%253aTGBC18TKB.CNhs10734.10417-106C3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/papillotubular%2520adenocarcinoma%2520cell%2520line%253aTGBC18TKB.CNhs10734.10417-106C3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/papillotubular%2520adenocarcinoma%2520cell%2520line%253aTGBC18TKB.CNhs10734.10417-106C3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10417-106C3 | |id=FF:10417-106C3 | ||
|is_a=DOID:3119;;DOID:4929;;EFO:0002091 | |is_a=DOID:3119;;DOID:4929;;EFO:0002091;;FF:0000210;;FF:0100167;;UBERON:0004913 | ||
|is_obsolete= | |||
|library_id=CNhs10734 | |||
|library_id_phase_based=2:CNhs10734 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10417 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10417 | |||
|name=papillotubular adenocarcinoma cell line:TGBC18TKB | |name=papillotubular adenocarcinoma cell line:TGBC18TKB | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10734,LSID691,release008,COMPLETED | |profile_hcage=CNhs10734,LSID691,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=106 | |rna_box=106 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=61.70925 | |rna_weight_ug=61.70925 | ||
|sample_age=79 | |sample_age=79 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB1169 | |sample_cell_catalog=RCB1169 | ||
|sample_cell_line=TGBC18TKB | |sample_cell_line=TGBC18TKB | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=J | |sample_ethnicity=J | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.42884080380702e-246!GO:0043226;organelle;1.9051351419884e-193!GO:0043229;intracellular organelle;4.78148989482745e-193!GO:0043231;intracellular membrane-bound organelle;8.18342577782902e-188!GO:0043227;membrane-bound organelle;8.18342577782902e-188!GO:0005737;cytoplasm;6.04985022437577e-179!GO:0044422;organelle part;3.14059649042467e-137!GO:0044446;intracellular organelle part;1.44791519318064e-135!GO:0044444;cytoplasmic part;1.03959282682002e-111!GO:0032991;macromolecular complex;8.15046910641669e-88!GO:0005634;nucleus;9.9624907822463e-85!GO:0044238;primary metabolic process;4.94019084035934e-84!GO:0044237;cellular metabolic process;5.5072553960325e-83!GO:0043170;macromolecule metabolic process;9.77805149211123e-81!GO:0005515;protein binding;7.4996809971253e-76!GO:0044428;nuclear part;7.27336237218667e-74!GO:0030529;ribonucleoprotein complex;6.92764960836746e-70!GO:0003723;RNA binding;5.63863723318245e-68!GO:0043233;organelle lumen;5.98882419033762e-63!GO:0031974;membrane-enclosed lumen;5.98882419033762e-63!GO:0043283;biopolymer metabolic process;4.05358580871265e-51!GO:0005739;mitochondrion;5.08790331373656e-48!GO:0016043;cellular component organization and biogenesis;5.91785310560079e-48!GO:0019538;protein metabolic process;7.56956308445357e-48!GO:0033036;macromolecule localization;1.43060089198964e-47!GO:0031090;organelle membrane;3.47125150491253e-46!GO:0015031;protein transport;3.65330290666258e-46!GO:0043234;protein complex;7.38055051810075e-46!GO:0006396;RNA processing;5.63514392891534e-45!GO:0044267;cellular protein metabolic process;2.33246933906031e-43!GO:0008104;protein localization;3.65090487210507e-43!GO:0031981;nuclear lumen;5.26323176350253e-43!GO:0044260;cellular macromolecule metabolic process;2.25530055307902e-42!GO:0045184;establishment of protein localization;5.84253882381728e-42!GO:0006412;translation;1.74845881860812e-41!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.11183568832731e-41!GO:0010467;gene expression;1.71246679223715e-40!GO:0005840;ribosome;3.40064323425734e-40!GO:0043228;non-membrane-bound organelle;1.31750132348472e-38!GO:0043232;intracellular non-membrane-bound organelle;1.31750132348472e-38!GO:0046907;intracellular transport;7.27899915707437e-37!GO:0016071;mRNA metabolic process;8.82042964006199e-37!GO:0003735;structural constituent of ribosome;1.13498776113538e-34!GO:0006996;organelle organization and biogenesis;1.24394140491059e-34!GO:0031967;organelle envelope;4.04344978161498e-34!GO:0031975;envelope;7.2864167101584e-34!GO:0005829;cytosol;2.7184433902348e-33!GO:0006886;intracellular protein transport;1.36447096379234e-32!GO:0008380;RNA splicing;1.58215909200896e-32!GO:0065003;macromolecular complex assembly;3.61053965033831e-32!GO:0009059;macromolecule biosynthetic process;5.07752033871795e-32!GO:0009058;biosynthetic process;2.13687364145447e-31!GO:0006397;mRNA processing;2.18338891795801e-31!GO:0006259;DNA metabolic process;1.21353686687385e-30!GO:0044429;mitochondrial part;2.04264071029978e-30!GO:0044249;cellular biosynthetic process;6.84723325404196e-30!GO:0033279;ribosomal subunit;2.21051521157085e-28!GO:0007049;cell cycle;2.92806461041433e-28!GO:0022607;cellular component assembly;3.88959557027356e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.72403615336408e-26!GO:0003676;nucleic acid binding;2.11445229006877e-26!GO:0005654;nucleoplasm;2.64528416021732e-26!GO:0000166;nucleotide binding;7.35408231514405e-25!GO:0012505;endomembrane system;7.09859252746919e-24!GO:0051649;establishment of cellular localization;2.16146127797566e-23!GO:0005681;spliceosome;2.44878428759016e-23!GO:0051641;cellular localization;4.21815788928109e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.49026831720479e-21!GO:0044451;nucleoplasm part;5.94833334424052e-21!GO:0016070;RNA metabolic process;1.44085968678813e-20!GO:0005740;mitochondrial envelope;8.18198502900674e-20!GO:0016874;ligase activity;9.64836846189128e-20!GO:0022402;cell cycle process;1.65568194715145e-19!GO:0019866;organelle inner membrane;4.33300620544676e-19!GO:0006512;ubiquitin cycle;6.18937399430956e-19!GO:0016462;pyrophosphatase activity;1.00968128697874e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.5258004526878e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.04273262620699e-18!GO:0005794;Golgi apparatus;2.276743053227e-18!GO:0017111;nucleoside-triphosphatase activity;2.276743053227e-18!GO:0031966;mitochondrial membrane;2.276743053227e-18!GO:0008134;transcription factor binding;2.276743053227e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;8.37385104494996e-18!GO:0044265;cellular macromolecule catabolic process;8.58520399289135e-18!GO:0032553;ribonucleotide binding;9.98192589793927e-18!GO:0032555;purine ribonucleotide binding;9.98192589793927e-18!GO:0006974;response to DNA damage stimulus;1.21967327617663e-17!GO:0019941;modification-dependent protein catabolic process;1.58345004282532e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.58345004282532e-17!GO:0005730;nucleolus;1.63595538683239e-17!GO:0044445;cytosolic part;1.6682210151614e-17!GO:0043285;biopolymer catabolic process;2.21381900975845e-17!GO:0006511;ubiquitin-dependent protein catabolic process;2.9033863327553e-17!GO:0044257;cellular protein catabolic process;3.05879973066604e-17!GO:0017076;purine nucleotide binding;3.62051306976679e-17!GO:0005743;mitochondrial inner membrane;5.17324764254039e-17!GO:0006457;protein folding;1.14680881319975e-16!GO:0022618;protein-RNA complex assembly;1.40625332059383e-16!GO:0048770;pigment granule;2.08819102722522e-16!GO:0042470;melanosome;2.08819102722522e-16!GO:0043412;biopolymer modification;4.21697475282505e-16!GO:0000278;mitotic cell cycle;4.87489429608262e-16!GO:0006119;oxidative phosphorylation;5.0026154036526e-16!GO:0005694;chromosome;1.26772398824749e-15!GO:0015935;small ribosomal subunit;1.47600566444244e-15!GO:0005524;ATP binding;1.54064704767994e-15!GO:0030163;protein catabolic process;2.10407982697707e-15!GO:0006605;protein targeting;2.61450474445252e-15!GO:0009057;macromolecule catabolic process;4.90310869999522e-15!GO:0005783;endoplasmic reticulum;5.03267693482535e-15!GO:0032559;adenyl ribonucleotide binding;5.31926836909627e-15!GO:0005635;nuclear envelope;6.20664561916839e-15!GO:0000502;proteasome complex (sensu Eukaryota);7.91081257060165e-15!GO:0044455;mitochondrial membrane part;9.61911809248793e-15!GO:0006281;DNA repair;1.55074227426934e-14!GO:0006464;protein modification process;1.68378923475514e-14!GO:0048193;Golgi vesicle transport;2.63842349059781e-14!GO:0030554;adenyl nucleotide binding;2.67147313866632e-14!GO:0044432;endoplasmic reticulum part;5.89407403532261e-14!GO:0015934;large ribosomal subunit;7.2501541421662e-14!GO:0051276;chromosome organization and biogenesis;1.21432301804643e-13!GO:0012501;programmed cell death;1.30750014405488e-13!GO:0044248;cellular catabolic process;1.85447606268669e-13!GO:0006366;transcription from RNA polymerase II promoter;2.43242047547868e-13!GO:0006915;apoptosis;2.60835166158754e-13!GO:0008219;cell death;3.53031702070784e-13!GO:0016265;death;3.53031702070784e-13!GO:0044427;chromosomal part;5.61362801033451e-13!GO:0016192;vesicle-mediated transport;6.23690085108283e-13!GO:0031965;nuclear membrane;7.89412017275973e-13!GO:0031980;mitochondrial lumen;1.07345135646939e-12!GO:0005759;mitochondrial matrix;1.07345135646939e-12!GO:0043687;post-translational protein modification;1.11460839642738e-12!GO:0006260;DNA replication;1.33655566603013e-12!GO:0051301;cell division;1.52602354598924e-12!GO:0022403;cell cycle phase;1.66258369021255e-12!GO:0008639;small protein conjugating enzyme activity;2.60265325144409e-12!GO:0050794;regulation of cellular process;2.69706819691032e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;4.1351141089797e-12!GO:0000375;RNA splicing, via transesterification reactions;4.1351141089797e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.1351141089797e-12!GO:0004842;ubiquitin-protein ligase activity;4.67890238092887e-12!GO:0004386;helicase activity;5.32019644761041e-12!GO:0008135;translation factor activity, nucleic acid binding;5.4757987289929e-12!GO:0006913;nucleocytoplasmic transport;7.36865420115583e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.61452223671566e-12!GO:0051726;regulation of cell cycle;9.44965413476403e-12!GO:0009719;response to endogenous stimulus;1.01671950414585e-11!GO:0044453;nuclear membrane part;1.12658415991304e-11!GO:0019787;small conjugating protein ligase activity;1.17153455781374e-11!GO:0000074;regulation of progression through cell cycle;1.26187332390803e-11!GO:0003712;transcription cofactor activity;1.63930628907547e-11!GO:0051169;nuclear transport;1.69771103786641e-11!GO:0016604;nuclear body;1.79540167278439e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.88725718718176e-11!GO:0000087;M phase of mitotic cell cycle;1.95293485781728e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;2.36923590148021e-11!GO:0007067;mitosis;3.02421424442943e-11!GO:0051082;unfolded protein binding;3.05077989904665e-11!GO:0005746;mitochondrial respiratory chain;3.05077989904665e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.28367959402338e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.08267584191257e-11!GO:0005761;mitochondrial ribosome;6.00803479497025e-11!GO:0000313;organellar ribosome;6.00803479497025e-11!GO:0042254;ribosome biogenesis and assembly;6.18306465805129e-11!GO:0005789;endoplasmic reticulum membrane;9.52548676686568e-11!GO:0006323;DNA packaging;1.00306317288031e-10!GO:0050136;NADH dehydrogenase (quinone) activity;1.22091120238826e-10!GO:0003954;NADH dehydrogenase activity;1.22091120238826e-10!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.22091120238826e-10!GO:0016887;ATPase activity;1.26800855757151e-10!GO:0016881;acid-amino acid ligase activity;2.09586127010596e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.20150133847636e-10!GO:0000279;M phase;2.67680763604163e-10!GO:0006413;translational initiation;3.18624200915009e-10!GO:0006461;protein complex assembly;3.27189161804463e-10!GO:0051186;cofactor metabolic process;3.53341956198979e-10!GO:0006403;RNA localization;3.80633428413301e-10!GO:0050657;nucleic acid transport;4.01423052849178e-10!GO:0051236;establishment of RNA localization;4.01423052849178e-10!GO:0050658;RNA transport;4.01423052849178e-10!GO:0003743;translation initiation factor activity;4.10469885955932e-10!GO:0042623;ATPase activity, coupled;5.07963535504358e-10!GO:0005643;nuclear pore;5.66439423887745e-10!GO:0006446;regulation of translational initiation;8.2550333329067e-10!GO:0048523;negative regulation of cellular process;9.53710417283501e-10!GO:0016607;nuclear speck;1.65503526994702e-09!GO:0051246;regulation of protein metabolic process;2.57843550582177e-09!GO:0042775;organelle ATP synthesis coupled electron transport;4.00733209887436e-09!GO:0042773;ATP synthesis coupled electron transport;4.00733209887436e-09!GO:0043067;regulation of programmed cell death;4.11747070210177e-09!GO:0042981;regulation of apoptosis;4.55479881162863e-09!GO:0016563;transcription activator activity;4.55479881162863e-09!GO:0006732;coenzyme metabolic process;5.22021226818013e-09!GO:0008565;protein transporter activity;7.50881358353316e-09!GO:0030964;NADH dehydrogenase complex (quinone);7.81764533790551e-09!GO:0045271;respiratory chain complex I;7.81764533790551e-09!GO:0005747;mitochondrial respiratory chain complex I;7.81764533790551e-09!GO:0005768;endosome;8.84869877148333e-09!GO:0000785;chromatin;9.18624106620689e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.09116010909017e-08!GO:0044431;Golgi apparatus part;1.10495811296659e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.14848729621469e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.35306699856236e-08!GO:0008026;ATP-dependent helicase activity;1.77692190671728e-08!GO:0065004;protein-DNA complex assembly;1.95921931106489e-08!GO:0048519;negative regulation of biological process;2.07063693509067e-08!GO:0051028;mRNA transport;3.04905081068703e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.43423439144371e-08!GO:0017038;protein import;4.57843432968658e-08!GO:0016568;chromatin modification;4.98027995026567e-08!GO:0015630;microtubule cytoskeleton;5.16276847225626e-08!GO:0032446;protein modification by small protein conjugation;5.4834345305606e-08!GO:0009056;catabolic process;5.85030334686602e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.85030334686602e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.12426559693266e-08!GO:0046930;pore complex;7.00811659807618e-08!GO:0006333;chromatin assembly or disassembly;9.03341991431738e-08!GO:0050789;regulation of biological process;9.25110350422574e-08!GO:0048475;coated membrane;9.25110350422574e-08!GO:0030117;membrane coat;9.25110350422574e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.25110350422574e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.56553347894648e-08!GO:0016567;protein ubiquitination;1.0482433635654e-07!GO:0006399;tRNA metabolic process;1.12762803257355e-07!GO:0005793;ER-Golgi intermediate compartment;1.16540328033433e-07!GO:0031324;negative regulation of cellular metabolic process;1.42174002236798e-07!GO:0030120;vesicle coat;1.4806848222237e-07!GO:0030662;coated vesicle membrane;1.4806848222237e-07!GO:0065002;intracellular protein transport across a membrane;1.81531067230159e-07!GO:0016072;rRNA metabolic process;1.82244359291467e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.82663550369701e-07!GO:0007005;mitochondrion organization and biogenesis;2.56933049760334e-07!GO:0009892;negative regulation of metabolic process;2.74173883634171e-07!GO:0016787;hydrolase activity;3.00501591696047e-07!GO:0003713;transcription coactivator activity;3.45447807121462e-07!GO:0030532;small nuclear ribonucleoprotein complex;3.5959152426125e-07!GO:0009060;aerobic respiration;3.68560563239423e-07!GO:0006364;rRNA processing;5.33527389453002e-07!GO:0009259;ribonucleotide metabolic process;6.26839264462205e-07!GO:0006163;purine nucleotide metabolic process;6.52568564797214e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.76513865121319e-07!GO:0019222;regulation of metabolic process;6.76513865121319e-07!GO:0043566;structure-specific DNA binding;6.96859528057197e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.76228849001957e-07!GO:0045333;cellular respiration;1.00734449401871e-06!GO:0016740;transferase activity;1.05250462809625e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.05637633519735e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.05637633519735e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.05637633519735e-06!GO:0009055;electron carrier activity;1.15586060408677e-06!GO:0043038;amino acid activation;1.54387988377159e-06!GO:0006418;tRNA aminoacylation for protein translation;1.54387988377159e-06!GO:0043039;tRNA aminoacylation;1.54387988377159e-06!GO:0019899;enzyme binding;1.64745223332509e-06!GO:0006793;phosphorus metabolic process;1.70258029122592e-06!GO:0006796;phosphate metabolic process;1.70258029122592e-06!GO:0006164;purine nucleotide biosynthetic process;1.77387132619183e-06!GO:0003924;GTPase activity;1.77581174875853e-06!GO:0015986;ATP synthesis coupled proton transport;2.02635672139308e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.02635672139308e-06!GO:0000139;Golgi membrane;2.03339427566492e-06!GO:0009150;purine ribonucleotide metabolic process;2.05941866724101e-06!GO:0051427;hormone receptor binding;2.177855372421e-06!GO:0009141;nucleoside triphosphate metabolic process;2.42848151141064e-06!GO:0005667;transcription factor complex;2.5061334628034e-06!GO:0043069;negative regulation of programmed cell death;2.57817945882168e-06!GO:0000245;spliceosome assembly;2.79171369527641e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.9130466419418e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.00434517851813e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.00434517851813e-06!GO:0019829;cation-transporting ATPase activity;3.03803071307139e-06!GO:0044440;endosomal part;3.11036343847489e-06!GO:0010008;endosome membrane;3.11036343847489e-06!GO:0051170;nuclear import;3.29558546231012e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.39803431487227e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.39803431487227e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.4509326877489e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.4509326877489e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.4509326877489e-06!GO:0005770;late endosome;3.46748030676364e-06!GO:0009260;ribonucleotide biosynthetic process;3.69509872999542e-06!GO:0006916;anti-apoptosis;3.93101835815451e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.28161245590799e-06!GO:0005813;centrosome;4.28161542719115e-06!GO:0005798;Golgi-associated vesicle;4.32151269773718e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.54378827184194e-06!GO:0035257;nuclear hormone receptor binding;4.74510448435608e-06!GO:0048522;positive regulation of cellular process;4.89041737276218e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.50242459808844e-06!GO:0009152;purine ribonucleotide biosynthetic process;5.55191391487921e-06!GO:0007264;small GTPase mediated signal transduction;6.27335245189006e-06!GO:0006606;protein import into nucleus;6.32530837062322e-06!GO:0016779;nucleotidyltransferase activity;6.5733257930397e-06!GO:0043066;negative regulation of apoptosis;6.64616057805709e-06!GO:0031988;membrane-bound vesicle;7.09365798427814e-06!GO:0005819;spindle;7.25706467892318e-06!GO:0005815;microtubule organizing center;7.28973136024745e-06!GO:0000151;ubiquitin ligase complex;7.29404515332898e-06!GO:0006261;DNA-dependent DNA replication;7.29524100965562e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.35799491841497e-06!GO:0006613;cotranslational protein targeting to membrane;8.12115430410232e-06!GO:0015078;hydrogen ion transmembrane transporter activity;8.37065602801939e-06!GO:0051188;cofactor biosynthetic process;8.47365828918061e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.01576512669955e-05!GO:0006099;tricarboxylic acid cycle;1.07439784530333e-05!GO:0046356;acetyl-CoA catabolic process;1.07439784530333e-05!GO:0051168;nuclear export;1.13405411903753e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.17158167169688e-05!GO:0043623;cellular protein complex assembly;1.35311690354881e-05!GO:0006754;ATP biosynthetic process;1.46702643051962e-05!GO:0006753;nucleoside phosphate metabolic process;1.46702643051962e-05!GO:0045786;negative regulation of progression through cell cycle;1.55322087078351e-05!GO:0004298;threonine endopeptidase activity;1.57701248267224e-05!GO:0016564;transcription repressor activity;1.58751005486565e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.61885377154933e-05!GO:0046034;ATP metabolic process;1.69785166994268e-05!GO:0003697;single-stranded DNA binding;1.97696092038638e-05!GO:0007243;protein kinase cascade;1.97696092038638e-05!GO:0042802;identical protein binding;2.18127441272416e-05!GO:0003724;RNA helicase activity;2.19543753578362e-05!GO:0007010;cytoskeleton organization and biogenesis;2.22819374963009e-05!GO:0045259;proton-transporting ATP synthase complex;2.25786159290834e-05!GO:0051329;interphase of mitotic cell cycle;2.41480512865781e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.58547231516177e-05!GO:0065009;regulation of a molecular function;2.58554086680389e-05!GO:0005773;vacuole;2.77907797367151e-05!GO:0006084;acetyl-CoA metabolic process;2.93589900262879e-05!GO:0016310;phosphorylation;3.10858577799386e-05!GO:0009108;coenzyme biosynthetic process;3.69263532711694e-05!GO:0031982;vesicle;4.12801865154768e-05!GO:0005525;GTP binding;4.24014303319991e-05!GO:0008092;cytoskeletal protein binding;5.58996584200397e-05!GO:0016197;endosome transport;5.85095077078766e-05!GO:0006752;group transfer coenzyme metabolic process;7.03713980520981e-05!GO:0051325;interphase;7.09406745373578e-05!GO:0031410;cytoplasmic vesicle;7.11254516150671e-05!GO:0031252;leading edge;7.57210634666473e-05!GO:0006334;nucleosome assembly;7.67918178423733e-05!GO:0016481;negative regulation of transcription;8.09026263755261e-05!GO:0045941;positive regulation of transcription;8.40825864734276e-05!GO:0009117;nucleotide metabolic process;8.46699401044905e-05!GO:0016363;nuclear matrix;0.000107888066947333!GO:0000075;cell cycle checkpoint;0.000108404575923595!GO:0009109;coenzyme catabolic process;0.000109879466454313!GO:0031497;chromatin assembly;0.000117769636391545!GO:0030133;transport vesicle;0.000121978815283719!GO:0003690;double-stranded DNA binding;0.000121978815283719!GO:0031323;regulation of cellular metabolic process;0.000122704548084137!GO:0000323;lytic vacuole;0.000135301513168356!GO:0005764;lysosome;0.000135301513168356!GO:0006402;mRNA catabolic process;0.000154374390173854!GO:0003714;transcription corepressor activity;0.000154374390173854!GO:0045893;positive regulation of transcription, DNA-dependent;0.000159631337318787!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000163884047671562!GO:0005657;replication fork;0.000163884047671562!GO:0043021;ribonucleoprotein binding;0.000176159457797238!GO:0007051;spindle organization and biogenesis;0.000181516542648564!GO:0005788;endoplasmic reticulum lumen;0.000202591692009629!GO:0051187;cofactor catabolic process;0.000207373752447864!GO:0030029;actin filament-based process;0.000219684377733852!GO:0065007;biological regulation;0.000221052326981914!GO:0006401;RNA catabolic process;0.000260991452843547!GO:0051052;regulation of DNA metabolic process;0.000263491980842059!GO:0006352;transcription initiation;0.000278184563962297!GO:0006612;protein targeting to membrane;0.000293135633021023!GO:0005048;signal sequence binding;0.000333074092938673!GO:0008654;phospholipid biosynthetic process;0.000333074092938673!GO:0051789;response to protein stimulus;0.000339447329546023!GO:0006986;response to unfolded protein;0.000339447329546023!GO:0030867;rough endoplasmic reticulum membrane;0.000357546077376668!GO:0009967;positive regulation of signal transduction;0.000357962410832889!GO:0008094;DNA-dependent ATPase activity;0.000377747958635511!GO:0016853;isomerase activity;0.000401627539743484!GO:0006302;double-strand break repair;0.000457069099372259!GO:0005885;Arp2/3 protein complex;0.000459490912055122!GO:0032561;guanyl ribonucleotide binding;0.00048836055191245!GO:0019001;guanyl nucleotide binding;0.00048836055191245!GO:0005762;mitochondrial large ribosomal subunit;0.000502301798257254!GO:0000315;organellar large ribosomal subunit;0.000502301798257254!GO:0008186;RNA-dependent ATPase activity;0.000580999542743214!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000594587710493908!GO:0005769;early endosome;0.000599883415059024!GO:0030118;clathrin coat;0.000604529001059716!GO:0003729;mRNA binding;0.000672509895756713!GO:0007265;Ras protein signal transduction;0.000682361355525022!GO:0030658;transport vesicle membrane;0.000684990905222507!GO:0048471;perinuclear region of cytoplasm;0.00068754183608935!GO:0016859;cis-trans isomerase activity;0.00072553613280242!GO:0046983;protein dimerization activity;0.00073738537047969!GO:0005905;coated pit;0.00073738537047969!GO:0051252;regulation of RNA metabolic process;0.000738151015126598!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000798431742777565!GO:0030521;androgen receptor signaling pathway;0.000863338258267204!GO:0050790;regulation of catalytic activity;0.000980864474891536!GO:0003702;RNA polymerase II transcription factor activity;0.000988191243617798!GO:0003682;chromatin binding;0.00098998347501186!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000996673712915651!GO:0048518;positive regulation of biological process;0.00100306306274734!GO:0000775;chromosome, pericentric region;0.00102449923682057!GO:0006350;transcription;0.00110816231196065!GO:0006950;response to stress;0.00126198590894066!GO:0006892;post-Golgi vesicle-mediated transport;0.00148461022515716!GO:0007088;regulation of mitosis;0.00150166072609902!GO:0000314;organellar small ribosomal subunit;0.00150226116428199!GO:0005763;mitochondrial small ribosomal subunit;0.00150226116428199!GO:0003899;DNA-directed RNA polymerase activity;0.00158333958848323!GO:0031968;organelle outer membrane;0.00159297919084992!GO:0004004;ATP-dependent RNA helicase activity;0.00165159975887812!GO:0033116;ER-Golgi intermediate compartment membrane;0.00166285034233446!GO:0006839;mitochondrial transport;0.00169512797732522!GO:0006891;intra-Golgi vesicle-mediated transport;0.00173606334929969!GO:0048500;signal recognition particle;0.00180607615659611!GO:0019867;outer membrane;0.00188198717872232!GO:0008234;cysteine-type peptidase activity;0.00189465447081855!GO:0008632;apoptotic program;0.00213151085740423!GO:0051920;peroxiredoxin activity;0.00216111559934507!GO:0035258;steroid hormone receptor binding;0.0022492009548122!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00225607923000061!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00226978428301623!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0022843875733172!GO:0045454;cell redox homeostasis;0.00233106324666319!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00233549708271918!GO:0005741;mitochondrial outer membrane;0.00233663324963672!GO:0030660;Golgi-associated vesicle membrane;0.00235602315367126!GO:0016251;general RNA polymerase II transcription factor activity;0.00235630468001191!GO:0004674;protein serine/threonine kinase activity;0.00247125333967903!GO:0005083;small GTPase regulator activity;0.00253658309615525!GO:0031072;heat shock protein binding;0.00258807353259388!GO:0010468;regulation of gene expression;0.00279159892776554!GO:0048487;beta-tubulin binding;0.00283847703892364!GO:0030176;integral to endoplasmic reticulum membrane;0.00284090533013633!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00299375765038519!GO:0046966;thyroid hormone receptor binding;0.00303036048286349!GO:0003678;DNA helicase activity;0.00306533060812152!GO:0005874;microtubule;0.00319540259509979!GO:0051338;regulation of transferase activity;0.00334500180580444!GO:0000776;kinetochore;0.00334500180580444!GO:0004235;matrilysin activity;0.00347003310099204!GO:0030134;ER to Golgi transport vesicle;0.00355755132688889!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00355755132688889!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00355755132688889!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00355755132688889!GO:0043065;positive regulation of apoptosis;0.00359065615275195!GO:0030031;cell projection biogenesis;0.0036998098089232!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00372100325431595!GO:0007052;mitotic spindle organization and biogenesis;0.00383792357304124!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00397525352335136!GO:0006417;regulation of translation;0.00407947449487757!GO:0030127;COPII vesicle coat;0.00410715430941103!GO:0012507;ER to Golgi transport vesicle membrane;0.00410715430941103!GO:0000786;nucleosome;0.00412179745781009!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00412179745781009!GO:0015980;energy derivation by oxidation of organic compounds;0.00419258633256107!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00434087295522778!GO:0006626;protein targeting to mitochondrion;0.0044355285567267!GO:0000228;nuclear chromosome;0.00454674802497344!GO:0030119;AP-type membrane coat adaptor complex;0.00464289433841439!GO:0030659;cytoplasmic vesicle membrane;0.0046784372800918!GO:0007059;chromosome segregation;0.0046784372800918!GO:0043068;positive regulation of programmed cell death;0.0046784372800918!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0046784372800918!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00480055789776792!GO:0048468;cell development;0.00480055789776792!GO:0005637;nuclear inner membrane;0.00482600039576663!GO:0003684;damaged DNA binding;0.0048317073523007!GO:0006338;chromatin remodeling;0.00488616152888842!GO:0006611;protein export from nucleus;0.00507800224078536!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0051207700958241!GO:0045047;protein targeting to ER;0.0051207700958241!GO:0005791;rough endoplasmic reticulum;0.00518446761838134!GO:0006405;RNA export from nucleus;0.00526052459275922!GO:0007093;mitotic cell cycle checkpoint;0.00536745086742407!GO:0008139;nuclear localization sequence binding;0.0053996430630488!GO:0006091;generation of precursor metabolites and energy;0.00547565896762636!GO:0031902;late endosome membrane;0.00558754885480882!GO:0008312;7S RNA binding;0.00561148417258923!GO:0005856;cytoskeleton;0.00561471101482569!GO:0044452;nucleolar part;0.00563075660950574!GO:0008637;apoptotic mitochondrial changes;0.00569366101061222!GO:0008022;protein C-terminus binding;0.00570859985524856!GO:0043681;protein import into mitochondrion;0.0058226797266009!GO:0006383;transcription from RNA polymerase III promoter;0.0059024277869474!GO:0030131;clathrin adaptor complex;0.00592573095468461!GO:0000059;protein import into nucleus, docking;0.00606652313315435!GO:0051128;regulation of cellular component organization and biogenesis;0.00608609278284641!GO:0015631;tubulin binding;0.00613665826387613!GO:0043549;regulation of kinase activity;0.00637510410041653!GO:0009116;nucleoside metabolic process;0.00678986297749952!GO:0044433;cytoplasmic vesicle part;0.00678986297749952!GO:0030663;COPI coated vesicle membrane;0.00691371695230554!GO:0030126;COPI vesicle coat;0.00691371695230554!GO:0012506;vesicle membrane;0.00709973490647139!GO:0007242;intracellular signaling cascade;0.00723451718545786!GO:0000792;heterochromatin;0.00726173940269502!GO:0031625;ubiquitin protein ligase binding;0.00758532515971199!GO:0030518;steroid hormone receptor signaling pathway;0.00780145014861793!GO:0008047;enzyme activator activity;0.00782195303563204!GO:0009893;positive regulation of metabolic process;0.00827000240577555!GO:0005684;U2-dependent spliceosome;0.00836001313040773!GO:0016126;sterol biosynthetic process;0.00836001313040773!GO:0030132;clathrin coat of coated pit;0.00839862531260654!GO:0001726;ruffle;0.00868414620560743!GO:0031326;regulation of cellular biosynthetic process;0.00874055745026514!GO:0006414;translational elongation;0.0090468119634804!GO:0046489;phosphoinositide biosynthetic process;0.00924137999265045!GO:0016791;phosphoric monoester hydrolase activity;0.00954721214643232!GO:0006509;membrane protein ectodomain proteolysis;0.00954721214643232!GO:0033619;membrane protein proteolysis;0.00954721214643232!GO:0000086;G2/M transition of mitotic cell cycle;0.00968222710834279!GO:0000049;tRNA binding;0.00990878302552741!GO:0045892;negative regulation of transcription, DNA-dependent;0.0101271820102295!GO:0030125;clathrin vesicle coat;0.0102118832563395!GO:0030665;clathrin coated vesicle membrane;0.0102118832563395!GO:0046822;regulation of nucleocytoplasmic transport;0.0102118832563395!GO:0032774;RNA biosynthetic process;0.0102519353393045!GO:0006310;DNA recombination;0.0102531529007274!GO:0030027;lamellipodium;0.0102747673086693!GO:0000082;G1/S transition of mitotic cell cycle;0.0102747673086693!GO:0007030;Golgi organization and biogenesis;0.010718747363146!GO:0009889;regulation of biosynthetic process;0.0108101677852261!GO:0051059;NF-kappaB binding;0.0111913815076745!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0114046147557197!GO:0016301;kinase activity;0.0114081540687994!GO:0006351;transcription, DNA-dependent;0.0115173699477071!GO:0043488;regulation of mRNA stability;0.0115373535022982!GO:0043487;regulation of RNA stability;0.0115373535022982!GO:0032508;DNA duplex unwinding;0.011636872627883!GO:0032392;DNA geometric change;0.011636872627883!GO:0015992;proton transport;0.0116517409170625!GO:0006818;hydrogen transport;0.0119279221566264!GO:0009165;nucleotide biosynthetic process;0.0124445686132295!GO:0019843;rRNA binding;0.0124596389216022!GO:0045045;secretory pathway;0.0126153378351616!GO:0001558;regulation of cell growth;0.0126983165675759!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0127760592612701!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0127760592612701!GO:0008033;tRNA processing;0.0130685454724836!GO:0007266;Rho protein signal transduction;0.0130845173327625!GO:0033673;negative regulation of kinase activity;0.0131237258669378!GO:0006469;negative regulation of protein kinase activity;0.0131237258669378!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0132423556913752!GO:0016491;oxidoreductase activity;0.0132593562666953!GO:0042770;DNA damage response, signal transduction;0.0137778828792396!GO:0009966;regulation of signal transduction;0.0138029630229183!GO:0016272;prefoldin complex;0.01391113245934!GO:0003779;actin binding;0.0140195519381724!GO:0051087;chaperone binding;0.0140759483100352!GO:0031124;mRNA 3'-end processing;0.0141473625445863!GO:0006672;ceramide metabolic process;0.0142470291883494!GO:0050681;androgen receptor binding;0.0143296692813643!GO:0030833;regulation of actin filament polymerization;0.0143549064026537!GO:0016044;membrane organization and biogenesis;0.0145662644609131!GO:0051101;regulation of DNA binding;0.01468429355558!GO:0051287;NAD binding;0.0147711521022269!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0148777288311868!GO:0045859;regulation of protein kinase activity;0.0149254754366565!GO:0017166;vinculin binding;0.0150475732248186!GO:0016311;dephosphorylation;0.0151893838877333!GO:0030137;COPI-coated vesicle;0.0151893838877333!GO:0006275;regulation of DNA replication;0.0151893838877333!GO:0032906;transforming growth factor-beta2 production;0.0153074097992728!GO:0032909;regulation of transforming growth factor-beta2 production;0.0153074097992728!GO:0046474;glycerophospholipid biosynthetic process;0.0153853606601066!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.015662737090071!GO:0015399;primary active transmembrane transporter activity;0.015662737090071!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0158945829959319!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0159213991201062!GO:0005876;spindle microtubule;0.0160291449429074!GO:0005669;transcription factor TFIID complex;0.0160291449429074!GO:0032507;maintenance of cellular protein localization;0.0160891031307803!GO:0031325;positive regulation of cellular metabolic process;0.0164104408532722!GO:0008361;regulation of cell size;0.016425690655188!GO:0046519;sphingoid metabolic process;0.0164782700708534!GO:0043022;ribosome binding;0.0165611715057094!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0167444257050975!GO:0016584;nucleosome positioning;0.0172695727692984!GO:0048146;positive regulation of fibroblast proliferation;0.017459740818149!GO:0001836;release of cytochrome c from mitochondria;0.0177980588753283!GO:0005832;chaperonin-containing T-complex;0.0182682177775688!GO:0001889;liver development;0.0182891578416917!GO:0005938;cell cortex;0.018308965312866!GO:0006695;cholesterol biosynthetic process;0.0188533285484513!GO:0007050;cell cycle arrest;0.0189535503078615!GO:0007017;microtubule-based process;0.0190205230535744!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0190205230535744!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0190205230535744!GO:0006268;DNA unwinding during replication;0.0194665175776974!GO:0003711;transcription elongation regulator activity;0.0194752666211289!GO:0030695;GTPase regulator activity;0.0200297072631557!GO:0051336;regulation of hydrolase activity;0.0202743629910755!GO:0006367;transcription initiation from RNA polymerase II promoter;0.021474272705475!GO:0046467;membrane lipid biosynthetic process;0.0217350454681568!GO:0051348;negative regulation of transferase activity;0.0217350454681568!GO:0006650;glycerophospholipid metabolic process;0.0224295539970356!GO:0022408;negative regulation of cell-cell adhesion;0.0233731280998166!GO:0030140;trans-Golgi network transport vesicle;0.0239571682548389!GO:0004177;aminopeptidase activity;0.0239958683181136!GO:0045792;negative regulation of cell size;0.0242789523371216!GO:0042026;protein refolding;0.0245475287505048!GO:0044454;nuclear chromosome part;0.0246295579814957!GO:0007006;mitochondrial membrane organization and biogenesis;0.024856839656462!GO:0009112;nucleobase metabolic process;0.0248872744329906!GO:0008180;signalosome;0.0249100264206972!GO:0030384;phosphoinositide metabolic process;0.0249100264206972!GO:0000922;spindle pole;0.025228408914399!GO:0030880;RNA polymerase complex;0.0256780804703603!GO:0006376;mRNA splice site selection;0.0256780804703603!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0256780804703603!GO:0000209;protein polyubiquitination;0.025693045314309!GO:0008629;induction of apoptosis by intracellular signals;0.0257495887318653!GO:0016049;cell growth;0.0258878535255219!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0261582976090663!GO:0033043;regulation of organelle organization and biogenesis;0.0261582976090663!GO:0048144;fibroblast proliferation;0.0267645874932165!GO:0048145;regulation of fibroblast proliferation;0.0267645874932165!GO:0050662;coenzyme binding;0.0267890697580682!GO:0040029;regulation of gene expression, epigenetic;0.0268000898693017!GO:0008250;oligosaccharyl transferase complex;0.0269344433397006!GO:0007162;negative regulation of cell adhesion;0.0272658370567793!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0274600953947957!GO:0004527;exonuclease activity;0.0283728790028899!GO:0000339;RNA cap binding;0.0287882045356995!GO:0030522;intracellular receptor-mediated signaling pathway;0.029220156697558!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0303852804326993!GO:0051098;regulation of binding;0.0303852804326993!GO:0008538;proteasome activator activity;0.0308928717174825!GO:0043596;nuclear replication fork;0.030965050167773!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0309937751157453!GO:0031529;ruffle organization and biogenesis;0.0311359140722498!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0312010229149133!GO:0009119;ribonucleoside metabolic process;0.0317811672245649!GO:0006497;protein amino acid lipidation;0.0319370976800453!GO:0005862;muscle thin filament tropomyosin;0.0322859534558712!GO:0005869;dynactin complex;0.0324861767768569!GO:0051651;maintenance of cellular localization;0.0326386994822757!GO:0046483;heterocycle metabolic process;0.0326786673334587!GO:0006213;pyrimidine nucleoside metabolic process;0.0326786673334587!GO:0004576;oligosaccharyl transferase activity;0.0326786673334587!GO:0030308;negative regulation of cell growth;0.0329131753852987!GO:0006289;nucleotide-excision repair;0.0332366168263412!GO:0043087;regulation of GTPase activity;0.0332366168263412!GO:0031123;RNA 3'-end processing;0.0333395025129258!GO:0005784;translocon complex;0.03388613978797!GO:0008610;lipid biosynthetic process;0.0362184549969389!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0362184549969389!GO:0015002;heme-copper terminal oxidase activity;0.0362184549969389!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0362184549969389!GO:0004129;cytochrome-c oxidase activity;0.0362184549969389!GO:0022890;inorganic cation transmembrane transporter activity;0.0362986701933842!GO:0004721;phosphoprotein phosphatase activity;0.0368700772845977!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0371326860905371!GO:0030155;regulation of cell adhesion;0.0383508546729189!GO:0004197;cysteine-type endopeptidase activity;0.0383508546729189!GO:0005099;Ras GTPase activator activity;0.038570339814376!GO:0048819;regulation of hair follicle maturation;0.0385922481402864!GO:0051794;regulation of catagen;0.0385922481402864!GO:0051795;positive regulation of catagen;0.0385922481402864!GO:0048818;positive regulation of hair follicle maturation;0.0385922481402864!GO:0043621;protein self-association;0.0385922481402864!GO:0045449;regulation of transcription;0.038775823214745!GO:0006284;base-excision repair;0.0391051677887986!GO:0010149;senescence;0.0394429165003639!GO:0001666;response to hypoxia;0.0408226921393927!GO:0042158;lipoprotein biosynthetic process;0.0410224755187881!GO:0042393;histone binding;0.0411961964965697!GO:0032535;regulation of cellular component size;0.0411961964965697!GO:0004860;protein kinase inhibitor activity;0.0423454453004482!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0423454453004482!GO:0000428;DNA-directed RNA polymerase complex;0.0423454453004482!GO:0006984;ER-nuclear signaling pathway;0.0431546783559255!GO:0032200;telomere organization and biogenesis;0.0431995423367662!GO:0000723;telomere maintenance;0.0431995423367662!GO:0005665;DNA-directed RNA polymerase II, core complex;0.043442832920274!GO:0004003;ATP-dependent DNA helicase activity;0.0439501226476452!GO:0019783;small conjugating protein-specific protease activity;0.0439977046757266!GO:0007021;tubulin folding;0.0445304276080733!GO:0006270;DNA replication initiation;0.0462418152735177!GO:0046426;negative regulation of JAK-STAT cascade;0.0465551826317042!GO:0030832;regulation of actin filament length;0.0465551826317042!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0470202412738362!GO:0006917;induction of apoptosis;0.0477337318973474!GO:0008426;protein kinase C inhibitor activity;0.0478237669166989!GO:0003756;protein disulfide isomerase activity;0.047949283559602!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.047949283559602!GO:0006607;NLS-bearing substrate import into nucleus;0.0481792291292839!GO:0031575;G1/S transition checkpoint;0.0484250884972608!GO:0006740;NADPH regeneration;0.0491053204910061!GO:0006098;pentose-phosphate shunt;0.0491053204910061!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0491226259505905!GO:0006595;polyamine metabolic process;0.0496292179238839 | |||
|sample_id=10417 | |sample_id=10417 | ||
|sample_note=machine failed, remainder reloaded, low amount | |sample_note=machine failed, remainder reloaded, low amount | ||
| Line 76: | Line 99: | ||
|sample_tissue=duodenum | |sample_tissue=duodenum | ||
|top_motifs=ZEB1:2.26168819449;SNAI1..3:2.1952217586;TBX4,5:1.71711635278;XCPE1{core}:1.56906695764;MYOD1:1.38445816239;bHLH_family:1.36299975277;HSF1,2:1.3397460595;NKX2-3_NKX2-5:1.24965211417;TEAD1:1.21220295422;ADNP_IRX_SIX_ZHX:1.11773218672;PITX1..3:1.07132645351;SP1:1.05940524979;LEF1_TCF7_TCF7L1,2:1.03196169385;ZNF148:1.02852142088;SOX2:1.01247230703;NR1H4:0.985211819982;FOXN1:0.984443896586;NKX2-1,4:0.91655802395;E2F1..5:0.816287976809;POU2F1..3:0.814404272429;PPARG:0.813868812189;FOXQ1:0.793879682578;FOX{D1,D2}:0.791274499756;TLX2:0.782786576072;LMO2:0.777280058421;VSX1,2:0.770949749294;ELK1,4_GABP{A,B1}:0.653191319019;POU1F1:0.649725382837;FOXO1,3,4:0.580663437599;FOS_FOS{B,L1}_JUN{B,D}:0.563287308401;GLI1..3:0.53810222938;TFDP1:0.533909708795;BACH2:0.531052442893;RXRA_VDR{dimer}:0.530490640726;TFCP2:0.50502905435;ZNF423:0.492676258299;FOX{I1,J2}:0.485088590582;TFAP2{A,C}:0.48417743688;FOXP1:0.484109758283;NANOG:0.477004623336;FOXM1:0.476553270113;MAZ:0.47369714411;IRF7:0.444596882776;RREB1:0.439843602772;FOXD3:0.437141564931;EGR1..3:0.434623646524;PAX8:0.375807180688;HNF4A_NR2F1,2:0.368128857654;ONECUT1,2:0.336370570145;PDX1:0.308221362976;NFE2:0.291991379263;ZFP161:0.288245734194;PBX1:0.276652784718;FOX{F1,F2,J1}:0.273700905507;MYB:0.271718456994;NFKB1_REL_RELA:0.268506537572;FOSL2:0.267594825939;MED-1{core}:0.248484016509;JUN:0.244913086944;HNF1A:0.243045540631;NFY{A,B,C}:0.215244483848;TEF:0.208094037072;HBP1_HMGB_SSRP1_UBTF:0.19678650108;RFX2..5_RFXANK_RFXAP:0.185320804973;ATF4:0.183858821719;TP53:0.182299521625;MTF1:0.179825145953;TLX1..3_NFIC{dimer}:0.177084601484;BPTF:0.140365117666;RFX1:0.136788940628;ELF1,2,4:0.130213613844;CDC5L:0.127255030593;ATF5_CREB3:0.118385609205;TOPORS:0.11306989016;HOX{A6,A7,B6,B7}:0.107806795318;IRF1,2:0.0984841914913;SOX17:0.0764365041309;PAX5:0.0312898675791;FOXA2:0.00365287638767;SOX{8,9,10}:-0.0055784225567;OCT4_SOX2{dimer}:-0.00779319979674;TBP:-0.0237046081115;NR6A1:-0.0413137994595;AHR_ARNT_ARNT2:-0.0508799425037;ARID5B:-0.0696740594332;STAT2,4,6:-0.0708542188165;STAT5{A,B}:-0.0713761136714;ESRRA:-0.0715435662916;NKX6-1,2:-0.0761876131981;TFAP2B:-0.0810585677972;IKZF1:-0.0857579291721;STAT1,3:-0.0901112117205;LHX3,4:-0.125716524499;EBF1:-0.153866846455;ZNF143:-0.155662098288;PAX2:-0.158694014209;NRF1:-0.180293971064;ETS1,2:-0.183997640651;MZF1:-0.190349173357;GATA6:-0.20734740127;GTF2A1,2:-0.213338426373;ZNF384:-0.22495408725;SRF:-0.235781069953;CEBPA,B_DDIT3:-0.240990483355;HLF:-0.245370795202;MTE{core}:-0.247431045766;CUX2:-0.249979975602;ATF6:-0.255925533047;ATF2:-0.257988517379;HOX{A5,B5}:-0.264350667401;ESR1:-0.271854814108;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.273448329331;RBPJ:-0.294163862599;ZBTB16:-0.3152467669;MEF2{A,B,C,D}:-0.332811702362;HIC1:-0.342757806344;ALX1:-0.349119269036;DMAP1_NCOR{1,2}_SMARC:-0.356034723721;SPI1:-0.359201807695;IKZF2:-0.359218297558;RORA:-0.366915252009;GTF2I:-0.377778502323;PRRX1,2:-0.380474239722;PRDM1:-0.389549686185;NR3C1:-0.402494895327;RUNX1..3:-0.403600208912;PATZ1:-0.414735735188;SREBF1,2:-0.421430523065;EN1,2:-0.421595968041;ALX4:-0.470229826413;NANOG{mouse}:-0.485774847624;TAL1_TCF{3,4,12}:-0.499541059068;NR5A1,2:-0.500732050111;SPIB:-0.502317076198;HES1:-0.510280741713;AIRE:-0.510428405923;GFI1B:-0.513559719472;FOXL1:-0.519230721669;GFI1:-0.521930127716;CREB1:-0.533790087239;NKX3-2:-0.537025838158;BREu{core}:-0.571997604966;HAND1,2:-0.582653210704;EVI1:-0.593532683823;CRX:-0.595966929185;MYBL2:-0.59760222146;POU5F1:-0.610289527115;SOX5:-0.634431380448;SPZ1:-0.646255088;ZBTB6:-0.692976938881;NFIL3:-0.693778619397;NFE2L2:-0.6961422118;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.716694336209;REST:-0.737529346224;NFIX:-0.742028095182;NKX3-1:-0.757025050995;HMGA1,2:-0.764910628387;ZIC1..3:-0.808071027284;MYFfamily:-0.824667707099;KLF4:-0.837752182666;HOX{A4,D4}:-0.845591032987;RXR{A,B,G}:-0.862208704209;POU3F1..4:-0.862716994972;NHLH1,2:-0.876999475969;AR:-0.878893359396;EP300:-0.889295768634;PAX3,7:-0.893950890381;DBP:-0.940313475503;UFEwm:-0.94186791327;NFATC1..3:-0.948084459863;XBP1:-0.975538148577;HOXA9_MEIS1:-1.00127764264;ZNF238:-1.00750950481;YY1:-1.0159004996;POU6F1:-1.02169069972;T:-1.0356930203;CDX1,2,4:-1.07297632377;PAX4:-1.07784562918;NFE2L1:-1.12104947787;SMAD1..7,9:-1.12694900054;MAFB:-1.13726001911;GZF1:-1.15712235772;HMX1:-1.19081340893;HIF1A:-1.19166379867;PAX6:-1.25776111925;PAX1,9:-1.26976165112;TFAP4:-1.27153031387;GATA4:-1.34025492871;TGIF1:-1.3948312769;GCM1,2:-1.45454534924;FOXP3:-1.52981405157;NKX2-2,8:-1.62591917495 | |top_motifs=ZEB1:2.26168819449;SNAI1..3:2.1952217586;TBX4,5:1.71711635278;XCPE1{core}:1.56906695764;MYOD1:1.38445816239;bHLH_family:1.36299975277;HSF1,2:1.3397460595;NKX2-3_NKX2-5:1.24965211417;TEAD1:1.21220295422;ADNP_IRX_SIX_ZHX:1.11773218672;PITX1..3:1.07132645351;SP1:1.05940524979;LEF1_TCF7_TCF7L1,2:1.03196169385;ZNF148:1.02852142088;SOX2:1.01247230703;NR1H4:0.985211819982;FOXN1:0.984443896586;NKX2-1,4:0.91655802395;E2F1..5:0.816287976809;POU2F1..3:0.814404272429;PPARG:0.813868812189;FOXQ1:0.793879682578;FOX{D1,D2}:0.791274499756;TLX2:0.782786576072;LMO2:0.777280058421;VSX1,2:0.770949749294;ELK1,4_GABP{A,B1}:0.653191319019;POU1F1:0.649725382837;FOXO1,3,4:0.580663437599;FOS_FOS{B,L1}_JUN{B,D}:0.563287308401;GLI1..3:0.53810222938;TFDP1:0.533909708795;BACH2:0.531052442893;RXRA_VDR{dimer}:0.530490640726;TFCP2:0.50502905435;ZNF423:0.492676258299;FOX{I1,J2}:0.485088590582;TFAP2{A,C}:0.48417743688;FOXP1:0.484109758283;NANOG:0.477004623336;FOXM1:0.476553270113;MAZ:0.47369714411;IRF7:0.444596882776;RREB1:0.439843602772;FOXD3:0.437141564931;EGR1..3:0.434623646524;PAX8:0.375807180688;HNF4A_NR2F1,2:0.368128857654;ONECUT1,2:0.336370570145;PDX1:0.308221362976;NFE2:0.291991379263;ZFP161:0.288245734194;PBX1:0.276652784718;FOX{F1,F2,J1}:0.273700905507;MYB:0.271718456994;NFKB1_REL_RELA:0.268506537572;FOSL2:0.267594825939;MED-1{core}:0.248484016509;JUN:0.244913086944;HNF1A:0.243045540631;NFY{A,B,C}:0.215244483848;TEF:0.208094037072;HBP1_HMGB_SSRP1_UBTF:0.19678650108;RFX2..5_RFXANK_RFXAP:0.185320804973;ATF4:0.183858821719;TP53:0.182299521625;MTF1:0.179825145953;TLX1..3_NFIC{dimer}:0.177084601484;BPTF:0.140365117666;RFX1:0.136788940628;ELF1,2,4:0.130213613844;CDC5L:0.127255030593;ATF5_CREB3:0.118385609205;TOPORS:0.11306989016;HOX{A6,A7,B6,B7}:0.107806795318;IRF1,2:0.0984841914913;SOX17:0.0764365041309;PAX5:0.0312898675791;FOXA2:0.00365287638767;SOX{8,9,10}:-0.0055784225567;OCT4_SOX2{dimer}:-0.00779319979674;TBP:-0.0237046081115;NR6A1:-0.0413137994595;AHR_ARNT_ARNT2:-0.0508799425037;ARID5B:-0.0696740594332;STAT2,4,6:-0.0708542188165;STAT5{A,B}:-0.0713761136714;ESRRA:-0.0715435662916;NKX6-1,2:-0.0761876131981;TFAP2B:-0.0810585677972;IKZF1:-0.0857579291721;STAT1,3:-0.0901112117205;LHX3,4:-0.125716524499;EBF1:-0.153866846455;ZNF143:-0.155662098288;PAX2:-0.158694014209;NRF1:-0.180293971064;ETS1,2:-0.183997640651;MZF1:-0.190349173357;GATA6:-0.20734740127;GTF2A1,2:-0.213338426373;ZNF384:-0.22495408725;SRF:-0.235781069953;CEBPA,B_DDIT3:-0.240990483355;HLF:-0.245370795202;MTE{core}:-0.247431045766;CUX2:-0.249979975602;ATF6:-0.255925533047;ATF2:-0.257988517379;HOX{A5,B5}:-0.264350667401;ESR1:-0.271854814108;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.273448329331;RBPJ:-0.294163862599;ZBTB16:-0.3152467669;MEF2{A,B,C,D}:-0.332811702362;HIC1:-0.342757806344;ALX1:-0.349119269036;DMAP1_NCOR{1,2}_SMARC:-0.356034723721;SPI1:-0.359201807695;IKZF2:-0.359218297558;RORA:-0.366915252009;GTF2I:-0.377778502323;PRRX1,2:-0.380474239722;PRDM1:-0.389549686185;NR3C1:-0.402494895327;RUNX1..3:-0.403600208912;PATZ1:-0.414735735188;SREBF1,2:-0.421430523065;EN1,2:-0.421595968041;ALX4:-0.470229826413;NANOG{mouse}:-0.485774847624;TAL1_TCF{3,4,12}:-0.499541059068;NR5A1,2:-0.500732050111;SPIB:-0.502317076198;HES1:-0.510280741713;AIRE:-0.510428405923;GFI1B:-0.513559719472;FOXL1:-0.519230721669;GFI1:-0.521930127716;CREB1:-0.533790087239;NKX3-2:-0.537025838158;BREu{core}:-0.571997604966;HAND1,2:-0.582653210704;EVI1:-0.593532683823;CRX:-0.595966929185;MYBL2:-0.59760222146;POU5F1:-0.610289527115;SOX5:-0.634431380448;SPZ1:-0.646255088;ZBTB6:-0.692976938881;NFIL3:-0.693778619397;NFE2L2:-0.6961422118;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.716694336209;REST:-0.737529346224;NFIX:-0.742028095182;NKX3-1:-0.757025050995;HMGA1,2:-0.764910628387;ZIC1..3:-0.808071027284;MYFfamily:-0.824667707099;KLF4:-0.837752182666;HOX{A4,D4}:-0.845591032987;RXR{A,B,G}:-0.862208704209;POU3F1..4:-0.862716994972;NHLH1,2:-0.876999475969;AR:-0.878893359396;EP300:-0.889295768634;PAX3,7:-0.893950890381;DBP:-0.940313475503;UFEwm:-0.94186791327;NFATC1..3:-0.948084459863;XBP1:-0.975538148577;HOXA9_MEIS1:-1.00127764264;ZNF238:-1.00750950481;YY1:-1.0159004996;POU6F1:-1.02169069972;T:-1.0356930203;CDX1,2,4:-1.07297632377;PAX4:-1.07784562918;NFE2L1:-1.12104947787;SMAD1..7,9:-1.12694900054;MAFB:-1.13726001911;GZF1:-1.15712235772;HMX1:-1.19081340893;HIF1A:-1.19166379867;PAX6:-1.25776111925;PAX1,9:-1.26976165112;TFAP4:-1.27153031387;GATA4:-1.34025492871;TGIF1:-1.3948312769;GCM1,2:-1.45454534924;FOXP3:-1.52981405157;NKX2-2,8:-1.62591917495 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10417-106C3;search_select_hide=table117:FF:10417-106C3 | |||
}} | }} | ||
Latest revision as of 14:00, 3 June 2020
| Name: | papillotubular adenocarcinoma cell line:TGBC18TKB |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10734 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10734
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10734
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.434 |
| 10 | 10 | 0.908 |
| 100 | 100 | 0.928 |
| 101 | 101 | 0.0737 |
| 102 | 102 | 0.56 |
| 103 | 103 | 0.165 |
| 104 | 104 | 0.875 |
| 105 | 105 | 0.632 |
| 106 | 106 | 0.368 |
| 107 | 107 | 0.877 |
| 108 | 108 | 0.788 |
| 109 | 109 | 0.279 |
| 11 | 11 | 0.172 |
| 110 | 110 | 0.758 |
| 111 | 111 | 0.259 |
| 112 | 112 | 0.308 |
| 113 | 113 | 0.24 |
| 114 | 114 | 0.119 |
| 115 | 115 | 0.456 |
| 116 | 116 | 0.154 |
| 117 | 117 | 0.0207 |
| 118 | 118 | 0.931 |
| 119 | 119 | 0.65 |
| 12 | 12 | 0.564 |
| 120 | 120 | 0.631 |
| 121 | 121 | 0.289 |
| 122 | 122 | 0.354 |
| 123 | 123 | 0.855 |
| 124 | 124 | 0.0194 |
| 125 | 125 | 0.244 |
| 126 | 126 | 0.834 |
| 127 | 127 | 0.965 |
| 128 | 128 | 0.105 |
| 129 | 129 | 0.236 |
| 13 | 13 | 0.0816 |
| 130 | 130 | 0.64 |
| 131 | 131 | 0.0709 |
| 132 | 132 | 0.394 |
| 133 | 133 | 0.125 |
| 134 | 134 | 0.499 |
| 135 | 135 | 0.0183 |
| 136 | 136 | 0.0881 |
| 137 | 137 | 0.112 |
| 138 | 138 | 0.0936 |
| 139 | 139 | 0.205 |
| 14 | 14 | 0.878 |
| 140 | 140 | 0.244 |
| 141 | 141 | 0.042 |
| 142 | 142 | 0.765 |
| 143 | 143 | 0.0145 |
| 144 | 144 | 0.11 |
| 145 | 145 | 0.804 |
| 146 | 146 | 0.361 |
| 147 | 147 | 0.576 |
| 148 | 148 | 0.831 |
| 149 | 149 | 0.344 |
| 15 | 15 | 0.647 |
| 150 | 150 | 0.245 |
| 151 | 151 | 0.552 |
| 152 | 152 | 0.0165 |
| 153 | 153 | 0.311 |
| 154 | 154 | 0.488 |
| 155 | 155 | 0.913 |
| 156 | 156 | 0.33 |
| 157 | 157 | 0.429 |
| 158 | 158 | 0.316 |
| 159 | 159 | 0.246 |
| 16 | 16 | 0.83 |
| 160 | 160 | 0.49 |
| 161 | 161 | 0.302 |
| 162 | 162 | 0.56 |
| 163 | 163 | 0.922 |
| 164 | 164 | 0.987 |
| 165 | 165 | 0.892 |
| 166 | 166 | 0.26 |
| 167 | 167 | 0.627 |
| 168 | 168 | 0.958 |
| 169 | 169 | 0.135 |
| 17 | 17 | 0.443 |
| 18 | 18 | 0.0414 |
| 19 | 19 | 0.25 |
| 2 | 2 | 0.83 |
| 20 | 20 | 0.0896 |
| 21 | 21 | 0.794 |
| 22 | 22 | 0.738 |
| 23 | 23 | 0.705 |
| 24 | 24 | 0.918 |
| 25 | 25 | 0.748 |
| 26 | 26 | 0.737 |
| 27 | 27 | 0.485 |
| 28 | 28 | 0.5 |
| 29 | 29 | 0.858 |
| 3 | 3 | 0.534 |
| 30 | 30 | 0.151 |
| 31 | 31 | 0.219 |
| 32 | 32 | 4.06977e-5 |
| 33 | 33 | 0.0571 |
| 34 | 34 | 0.66 |
| 35 | 35 | 0.00335 |
| 36 | 36 | 0.972 |
| 37 | 37 | 0.642 |
| 38 | 38 | 0.529 |
| 39 | 39 | 0.865 |
| 4 | 4 | 0.563 |
| 40 | 40 | 0.423 |
| 41 | 41 | 0.0949 |
| 42 | 42 | 0.942 |
| 43 | 43 | 0.151 |
| 44 | 44 | 0.348 |
| 45 | 45 | 0.255 |
| 46 | 46 | 0.182 |
| 47 | 47 | 0.546 |
| 48 | 48 | 0.617 |
| 49 | 49 | 0.176 |
| 5 | 5 | 0.394 |
| 50 | 50 | 0.192 |
| 51 | 51 | 0.767 |
| 52 | 52 | 0.447 |
| 53 | 53 | 0.833 |
| 54 | 54 | 0.927 |
| 55 | 55 | 0.788 |
| 56 | 56 | 0.711 |
| 57 | 57 | 0.706 |
| 58 | 58 | 0.789 |
| 59 | 59 | 0.544 |
| 6 | 6 | 0.357 |
| 60 | 60 | 0.618 |
| 61 | 61 | 0.254 |
| 62 | 62 | 0.317 |
| 63 | 63 | 0.287 |
| 64 | 64 | 0.362 |
| 65 | 65 | 0.98 |
| 66 | 66 | 0.317 |
| 67 | 67 | 0.359 |
| 68 | 68 | 0.0365 |
| 69 | 69 | 0.294 |
| 7 | 7 | 0.646 |
| 70 | 70 | 0.911 |
| 71 | 71 | 0.371 |
| 72 | 72 | 0.752 |
| 73 | 73 | 0.0106 |
| 74 | 74 | 0.0323 |
| 75 | 75 | 0.389 |
| 76 | 76 | 0.842 |
| 77 | 77 | 0.425 |
| 78 | 78 | 0.0324 |
| 79 | 79 | 0.276 |
| 8 | 8 | 0.0909 |
| 80 | 80 | 0.601 |
| 81 | 81 | 0.00459 |
| 82 | 82 | 7.7262e-4 |
| 83 | 83 | 0.367 |
| 84 | 84 | 0.897 |
| 85 | 85 | 0.254 |
| 86 | 86 | 0.779 |
| 87 | 87 | 0.0677 |
| 88 | 88 | 0.684 |
| 89 | 89 | 0.442 |
| 9 | 9 | 0.554 |
| 90 | 90 | 0.186 |
| 91 | 91 | 0.104 |
| 92 | 92 | 0.337 |
| 93 | 93 | 0.847 |
| 94 | 94 | 0.036 |
| 95 | 95 | 0.0637 |
| 96 | 96 | 0.556 |
| 97 | 97 | 0.383 |
| 98 | 98 | 0.0574 |
| 99 | 99 | 0.76 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10734
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:3119 gastrointestinal system cancer
DOID:4929 tubular adenocarcinoma
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100167 adenocarcinoma cell line sample
UBERON:0004913 hepatopancreatic ampulla
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
299 (adenocarcinoma)
3119 (gastrointestinal system cancer)
4929 (tubular adenocarcinoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002108 (small intestine)
0000160 (intestine)
0002394 (bile duct)
0004913 (hepatopancreatic ampulla)
0000058 (duct)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003703 (extrahepatic bile duct)
0003928 (digestive system duct)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0002114 (duodenum)
0005409 (gastrointestinal system)
0002294 (biliary system)
0001173 (biliary tree)
0002423 (hepatobiliary system)
0001174 (common bile duct)
0004914 (duodenal papilla)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
