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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000055,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001062,UBERON:0001637,UBERON:0001981,UBERON:0002012,UBERON:0002049,UBERON:0002050,UBERON:0002061,UBERON:0002384,UBERON:0002532,UBERON:0003081,UBERON:0003084,UBERON:0003509,UBERON:0003914,UBERON:0004111,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004145,UBERON:0004291,UBERON:0004535,UBERON:0004537,UBERON:0004572,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0006965,UBERON:0007005,UBERON:0007100,UBERON:0007500,UBERON:0007798,UBERON:0008886
|DRA_sample_Accession=CAGE@SAMD00005559
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002557
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005559
|accession_numbers=CAGE;DRX008280;DRR009152;DRZ000577;DRZ001962;DRZ011927;DRZ013312
|accession_numbers_RNASeq=sRNA-Seq;DRX037111;DRR041477;DRZ007119
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001637,UBERON:0000483,UBERON:0002384,UBERON:0000479,UBERON:0000055,UBERON:0004121,UBERON:0004119,UBERON:0010314,UBERON:0004111,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0010313,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0010371,UBERON:0003509,UBERON:0007500,UBERON:0001981,UBERON:0000078,UBERON:0002049,UBERON:0010317,UBERON:0007798,UBERON:0002012,UBERON:0004535,UBERON:0004572,UBERON:0004537,UBERON:0008886,UBERON:0001009
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002557
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000057,FF:0000001,FF:0000068
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.96!89.72!SOX17;;chr7:35293685..35293718,-!p1@TBX20!1.44!26.54!TBX20;;chr6:134210243..134210257,+!p1@TCF21!1.36!22.01!TCF21;;chr4:174451370..174451387,-!p1@HAND2!1.28!18.04!HAND2;;chr8:11561684..11561751,+!p1@GATA4!1.22!15.77!GATA4;;chr12:66218255..66218304,+!p3@HMGA2!1.18!38.23!HMGA2;;chr19:46801639..46801699,+!p1@HIF3A!1.16!13.61!HIF3A;;chr12:66218836..66218888,+!p1@HMGA2!1.12!113.09!HMGA2;;chr18:19749386..19749404,+!p2@GATA6!1.09!16.11!GATA6;;chr4:174450089..174450153,-!p2@HAND2!1.08!11.00!HAND2;;chr18:19749541..19749557,+!p1@GATA6!1.07!34.14!GATA6;;chr11:61520075..61520136,+!p1@C11orf9!1.05!22.01!C11orf9;;chr3:141087393..141087426,+!p3@ZBTB38!1.03!38.79!ZBTB38;;chr5:92918919..92918942,+!p1@NR2F1!1.01!42.08!NR2F1;;chr11:46299199..46299233,+!p1@CREB3L1!0.99!46.39!CREB3L1;;chr12:66218598..66218645,+!p2@HMGA2!0.98!40.84!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!0.93!14.97!HMGA2;;chr7:19157248..19157268,-!p1@TWIST1!0.91!20.64!TWIST1;;chr6:126240380..126240430,+!p2@NCOA7!0.90!18.49!NCOA7;;chr16:86600426..86600441,+!p1@FOXC2!0.89!17.24!FOXC2;;chr12:66218212..66218244,+!p5@HMGA2!0.89!9.98!HMGA2;;chr1:170633348..170633399,+!p2@PRRX1!0.88!9.07!PRRX1;;chr5:92918956..92918969,+!p4@NR2F1!0.87!7.15!NR2F1;;chr20:30433396..30433414,-!p1@FOXS1!0.87!6.35!FOXS1;;chr3:25469724..25469773,+!p1@RARB!0.84!8.73!RARB;;chr8:37963466..37963506,+!p3@ASH2L!0.82!7.15!ASH2L;;chr11:32457075..32457095,-!p1@WT1!0.82!5.67!WT1;;chr2:19558373..19558392,-!p1@OSR1!0.81!15.99!OSR1;;chr14:62162285..62162296,+!p3@HIF1A!0.79!28.93!HIF1A;;chr6:85474299..85474324,-!p1@TBX18!0.79!9.64!TBX18;;chr5:92919375..92919438,+!p6@NR2F1!0.78!5.44!NR2F1;;chr18:53068911..53068935,-!p4@TCF4!0.75!5.33!TCF4;;chr12:66218904..66218913,+!p11@HMGA2!0.75!4.65!HMGA2;;chr8:72756063..72756125,-!p1@MSC!0.74!9.76!MSC;;chrY:21906594..21906622,-!p1@KDM5D!0.74!4.54!KDM5D;;chr7:19157043..19157088,-!p2@TWIST1!0.73!11.80!TWIST1;;chr15:57511609..57511651,+!p2@TCF12!0.73!7.83!TCF12;;chr7:1577899..1577943,+!p3@MAFK!0.73!4.31!MAFK;;chrY:2803415..2803468,+!p1@ZFY!0.73!4.31!ZFY;;chr1:151032860..151032918,+!p1@MLLT11!0.72!57.17!MLLT11;;chr14:62162258..62162269,+!p2@HIF1A!0.72!46.39!HIF1A;;chr1:170632959..170632987,+!p4@PRRX1!0.72!4.76!PRRX1;;chr21:39870339..39870443,-!p1@ERG!0.72!4.20!ERG;;chr15:67430351..67430366,+!p10@SMAD3!0.72!4.20!SMAD3;;chr6:85473156..85473210,-!p2@TBX18!0.71!5.22!TBX18;;chr1:170633262..170633285,+!p3@PRRX1!0.71!4.76!PRRX1;;chr8:72755987..72756002,-!p7@MSC!0.70!3.97!MSC;;chr1:158979872..158979898,+!p3@IFI16!0.69!13.38!IFI16;;chr1:170632285..170632309,+!p1@PRRX1!0.69!4.54!PRRX1;;chr3:25469815..25469866,+!p3@RARB!0.69!3.86!RARB;;chr11:65667884..65667895,-!p2@FOSL1!0.68!16.67!FOSL1;;chr5:92918894..92918912,+!p2@NR2F1!0.68!13.84!NR2F1;;chr8:72756023..72756055,-!p6@MSC!0.68!4.88!MSC;;chr17:1959369..1959388,+!p2@HIC1!0.67!10.78!HIC1;;chr11:46299539..46299620,+!p2@CREB3L1!0.67!6.69!CREB3L1;;chr3:168864315..168864339,-!p2@MECOM!0.67!6.47!MECOM;;chr3:141087339..141087387,+!p2@ZBTB38!0.66!42.99!ZBTB38;;chr5:92919100..92919135,+!p3@NR2F1!0.66!4.54!NR2F1;;chr18:19749517..19749531,+!p3@GATA6!0.65!6.69!GATA6;;chr8:72756267..72756296,-!p4@MSC!0.64!5.33!MSC;;chr10:94449703..94449718,+!p1@HHEX!0.63!14.41!HHEX;;chr12:66357214..66357233,+!p13@HMGA2!0.63!3.29!HMGA2;;chr8:72756667..72756736,-!p2@MSC!0.61!5.22!MSC;;chr2:231084820..231084836,-!p5@SP110!0.61!3.63!SP110;;chr20:48599506..48599526,+!p1@SNAI1!0.60!23.14!SNAI1;;chr12:66218573..66218596,+!p7@HMGA2!0.60!4.76!HMGA2;;chr6:126240356..126240379,+!p7@NCOA7!0.60!3.86!NCOA7;;chr17:3571863..3571881,-!p1@TAX1BP3!0.59!254.77!TAX1BP3;;chr6:34204921..34204939,+!p3@HMGA1!0.59!106.51!HMGA1;;chr20:42295745..42295765,+!p1@MYBL2!0.58!56.94!MYBL2;;chr6:19837592..19837621,+!p1@ID4!0.58!20.98!ID4;;chr20:42295713..42295738,+!p2@MYBL2!0.58!20.19!MYBL2;;chr15:67418047..67418093,+!p4@SMAD3!0.57!3.63!SMAD3;;chr18:19749353..19749367,+!p4@GATA6!0.57!2.72!GATA6;;chr5:92919312..92919334,+!p13@NR2F1!0.57!2.72!NR2F1;;chr12:66358080..66358094,+!p15@HMGA2!0.57!2.72!HMGA2;;chr8:106330656..106330684,+!p1@ZFPM2!0.56!8.05!ZFPM2;;chr3:25470156..25470227,+!p2@RARB!0.56!2.61!RARB;;chr12:66218923..66218934,+!p14@HMGA2!0.56!2.61!HMGA2;;chr2:208030647..208030689,-!p1@KLF7!0.55!26.43!KLF7;;chr12:66218378..66218401,+!p6@HMGA2!0.54!4.20!HMGA2;;chr20:6748325..6748352,+!p1@BMP2!0.54!3.86!BMP2;;chr14:29235961..29236008,+!p1@FOXG1!0.54!2.50!FOXG1;;chr2:239756671..239756732,+!p1@TWIST2!0.53!9.30!TWIST2;;chr16:8962202..8962222,-!p3@CARHSP1!0.53!4.88!CARHSP1;;chr15:67418119..67418162,+!p5@SMAD3!0.53!2.72!SMAD3;;chr19:13213399..13213414,-!p6@LYL1!0.53!2.38!LYL1;;chr12:80085120..80085156,-!p14@PAWR!0.53!2.38!PAWR;;chr12:81110684..81110700,+!p1@MYF5!0.53!2.38!MYF5;;chr19:47523058..47523114,+!p1@NPAS1!0.53!2.38!NPAS1;;chr20:61051039..61051057,-!p1@GATA5!0.53!2.38!GATA5;;chr1:151032922..151032951,+!p2@MLLT11!0.52!4.31!MLLT11;;chr8:72756637..72756664,-!p3@MSC!0.52!2.72!MSC;;chr1:23885981..23886002,-!p1@ID3!0.51!518.61!ID3;;chr1:8938709..8938720,-!p3@ENO1!0.51!144.06!ENO1;;chr1:158979792..158979814,+!p2@IFI16!0.51!27.79!IFI16;;chr11:65686732..65686756,+!p2@DRAP1!0.51!11.80!DRAP1;;chr2:85980951..85981004,+!p1@ATOH8!0.51!4.08!ATOH8;;chr2:214014959..214015006,-!p4@IKZF2!0.51!2.27!IKZF2;;chr4:174451350..174451363,-!p3@HAND2!0.51!2.27!HAND2;;chr11:65686802..65686818,+!p6@DRAP1!0.50!4.31!DRAP1;;chr9:14082760..14082775,-!p6@NFIB!0.50!4.08!NFIB;;chr15:66994615..66994630,+!p3@SMAD6!0.50!3.40!SMAD6;;chr5:92919068..92919082,+!p5@NR2F1!0.50!2.72!NR2F1;;chr15:83953397..83953425,-!p1@BNC1!0.50!2.61!BNC1;;chr10:131762504..131762555,-!p1@EBF3!0.50!2.16!EBF3;;chr8:49833978..49833996,-!p1@SNAI2!0.49!57.85!SNAI2;;chr9:35732514..35732530,+!p5@CREB3!0.49!3.29!CREB3;;chr5:92918860..92918871,+!p10@NR2F1!0.49!2.38!NR2F1;;chr17:1958388..1958404,+!p1@HIC1!0.48!17.01!HIC1;;chr9:35732647..35732678,+!p2@CREB3!0.48!14.63!CREB3;;chr8:37963407..37963454,+!p2@ASH2L!0.48!7.60!ASH2L;;chr14:62213827..62213853,+!p6@HIF1A!0.48!3.18!HIF1A;;chr1:200008734..200008765,+!p2@NR5A2!0.48!2.04!NR5A2;;chr9:16705069..16705086,-!p3@BNC2!0.47!1.93!BNC2;;chr15:66994561..66994597,+!p2@SMAD6!0.46!5.56!SMAD6;;chr2:239756739..239756755,+!p2@TWIST2!0.46!3.74!TWIST2;;chr19:58400344..58400364,-!p2@ZNF814!0.46!3.06!ZNF814;;chr6:126240442..126240459,+!p4@NCOA7!0.46!2.61!NCOA7;;chr15:37392094..37392116,-!p6@MEIS2!0.46!2.50!MEIS2;;chr19:50169013..50169062,-!p2@IRF3!0.45!14.18!IRF3;;chr16:29819446..29819471,+!p9@MAZ!0.45!7.03!MAZ;;chr9:14083467..14083483,-!p4@NFIB!0.45!5.67!NFIB;;chr3:169381420..169381535,-!p1@MECOM!0.45!2.27!MECOM;;chr12:66218152..66218174,+!p10@HMGA2!0.45!2.04!HMGA2;;chr5:92918768..92918783,+!p8@NR2F1!0.45!1.81!NR2F1;;chr20:30193083..30193098,+!p1@ID1!0.44!202.48!ID1;;chr5:72744445..72744466,-!p2@FOXD1!0.44!3.40!FOXD1;;chr14:62162224..62162254,+!p1@HIF1A!0.43!358.45!HIF1A;;chr16:29819403..29819442,+!p5@MAZ!0.43!19.85!MAZ;;chr8:49833948..49833973,-!p2@SNAI2!0.43!14.97!SNAI2;;chr5:72744594..72744609,-!p1@FOXD1!0.43!10.66!FOXD1;;chr2:231280954..231280965,+!p2@SP100!0.43!3.74!SP100;;chr16:67881588..67881612,-!p2@CENPT!0.43!2.61!CENPT;;chr3:170076314..170076334,+!p2@SKIL!0.43!2.50!SKIL;;chr19:13213511..13213545,-!p2@LYL1!0.43!1.93!LYL1;;chr9:14083091..14083096,-!p12@NFIB!0.43!1.70!NFIB;;chr1:197886461..197886558,+!p1@LHX9!0.43!1.70!LHX9;;chr8:55370720..55370733,+!p2@SOX17!0.43!1.70!SOX17;;chr17:41623692..41623715,-!p1@ETV4!0.42!9.64!ETV4;;chr12:96588368..96588394,+!p3@ELK3!0.42!5.67!ELK3;;chr6:31126291..31126399,+!p1@TCF19!0.41!21.55!TCF19;;chr20:62680984..62680999,-!p1@SOX18!0.41!2.38!SOX18;;chr12:66218443..66218461,+!p8@HMGA2!0.41!2.27!HMGA2;;chr5:92919452..92919496,+!p11@NR2F1!0.41!1.59!NR2F1;;chr7:35293665..35293680,-!p2@TBX20!0.41!1.59!TBX20;;chr11:128563948..128564003,+!p1@FLI1!0.40!27.22!FLI1;;chr5:176738887..176738934,-!p1@MXD3!0.40!14.63!MXD3;;chr2:178128149..178128198,-!p2@NFE2L2!0.40!11.57!NFE2L2;;chr8:106330696..106330719,+!p2@ZFPM2!0.40!2.16!ZFPM2;;chr5:92920456..92920488,+!p9@NR2F1!0.40!1.93!NR2F1;;chr11:46299186..46299195,+!p3@CREB3L1!0.40!1.81!CREB3L1;;chr16:8962853..8962878,-!p1@CARHSP1!0.39!130.79!CARHSP1;;chr3:178789522..178789564,-!p2@ZMAT3!0.39!15.77!ZMAT3;;chr18:3450293..3450304,+!p4@TGIF1!0.39!4.76!TGIF1;;chr12:80085061..80085119,-!p6@PAWR!0.39!2.84!PAWR;;chr19:45260775..45260838,+!p5@BCL3!0.39!2.16!BCL3;;chr20:50179368..50179392,-!p2@NFATC2!0.39!2.16!NFATC2;;chr3:12330560..12330579,+!p1@PPARG!0.39!1.81!PPARG;;chr2:102091144..102091183,-!p2@RFX8!0.39!1.47!RFX8;;chr2:5832508..5832524,+!p1@SOX11!0.39!1.47!SOX11;;chr11:32457103..32457123,-!p3@WT1!0.39!1.47!WT1;;chr16:86612320..86612394,+!p1@FOXL1!0.39!1.47!FOXL1;;chr5:172662197..172662216,-!p1@NKX2-5!0.39!1.47!NKX2-5;;chr19:49865646..49865718,-!p1@TEAD2!0.38!18.15!TEAD2;;chr12:7079780..7079791,-!p2@PHB2!0.38!10.78!PHB2;;chr20:42543441..42543497,+!p1@TOX2!0.38!9.19!TOX2;;chr10:94449675..94449694,+!p2@HHEX!0.38!5.10!HHEX;;chr15:42749722..42749739,-!p2@ZFP106!0.38!3.18!ZFP106;;chr1:8926369..8926385,-!p12@ENO1!0.38!2.16!ENO1;;chr3:168865194..168865245,-!p3@MECOM!0.38!2.04!MECOM;;chr6:34204672..34204692,+!p1@HMGA1!0.37!238.32!HMGA1;;chr17:47492236..47492251,-!p1@PHB!0.37!29.15!PHB;;chr12:124873852..124873881,-!p3@NCOR2!0.37!12.25!NCOR2;;chr12:3069037..3069119,+!p2@TEAD4!0.37!6.69!TEAD4;;chr20:42543506..42543549,+!p2@TOX2!0.37!4.42!TOX2;;chr17:46622070..46622109,-!p1@HOXB2!0.37!3.97!HOXB2;;chr2:214015111..214015179,-!p1@IKZF2!0.37!3.06!IKZF2;;chr6:126070769..126070801,+!p1@HEY2!0.37!1.70!HEY2;;chr7:1577952..1577963,+!p8@MAFK!0.37!1.36!MAFK;;chr8:77596014..77596033,+!p6@ZFHX4!0.37!1.36!ZFHX4;;chr15:67430381..67430396,+!p21@SMAD3!0.37!1.36!SMAD3;;chr15:80843484..80843499,+!p5@ARNT2!0.37!1.36!ARNT2;;chr4:299227..299272,-!p1@ZNF732!0.37!1.36!ZNF732;;chr1:170632250..170632277,+!p7@PRRX1!0.37!1.36!PRRX1;;chr1:8938736..8938756,-!p1@ENO1!0.36!2272.05!ENO1;;chr19:16435625..16435682,+!p1@KLF2!0.36!67.27!KLF2;;chr11:65667846..65667868,-!p1@FOSL1!0.36!54.56!FOSL1;;chr19:1592714..1592762,-!p1@MBD3!0.36!15.20!MBD3;;chr11:65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|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
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Line 34: Line 44:
|fonse_treatment_closure=
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|has_quality=
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|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Pulmonary%2520Artery%252c%2520donor1.CNhs10878.11250-116E8.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Pulmonary%2520Artery%252c%2520donor1.CNhs10878.11250-116E8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Pulmonary%2520Artery%252c%2520donor1.CNhs10878.11250-116E8.hg38.nobarcode.ctss.bed.gz
|id=FF:11250-116E8
|id=FF:11250-116E8
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|is_a=EFO:0002091;;FF:0000068
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|microRNAs=
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|name=Fibroblast - Pulmonary Artery, donor1
|name=Fibroblast - Pulmonary Artery, donor1
|namespace=FANTOM5
|namespace=FANTOM5
Line 41: Line 65:
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|rna_box=116
|rna_box=116
|rna_catalog_number=SC3125
|rna_catalog_number=SC3125
Line 53: Line 80:
|rna_rin=
|rna_rin=
|rna_sample_type=total RNA
|rna_sample_type=total RNA
|rna_tube_id=116E8
|rna_tube_id=1.16E+10
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10008.ACAGTG
|sample_age=
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 68: Line 97:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.28366378494199e-248!GO:0005737;cytoplasm;7.99000427301093e-206!GO:0043226;organelle;4.6119529842006e-198!GO:0043229;intracellular organelle;8.91198804330897e-198!GO:0043231;intracellular membrane-bound organelle;7.07795712353483e-196!GO:0043227;membrane-bound organelle;1.73137218916686e-195!GO:0044422;organelle part;2.16733269544776e-154!GO:0044446;intracellular organelle part;5.7626704897506e-153!GO:0044444;cytoplasmic part;1.64042606575532e-149!GO:0032991;macromolecular complex;6.52931964074992e-108!GO:0030529;ribonucleoprotein complex;1.0289014635692e-97!GO:0044238;primary metabolic process;5.30483823730211e-89!GO:0044237;cellular metabolic process;5.74162485924801e-89!GO:0005515;protein binding;8.12682629757835e-84!GO:0043170;macromolecule metabolic process;3.72855321404999e-80!GO:0043233;organelle lumen;4.17467399235607e-77!GO:0031974;membrane-enclosed lumen;4.17467399235607e-77!GO:0005739;mitochondrion;3.10732230214579e-74!GO:0044428;nuclear part;4.44866683921148e-73!GO:0003723;RNA binding;9.30620221604989e-72!GO:0005634;nucleus;9.85593456036923e-72!GO:0005840;ribosome;4.37764852217111e-60!GO:0006412;translation;6.11744421258541e-56!GO:0031090;organelle membrane;1.40252603205804e-53!GO:0016043;cellular component organization and biogenesis;1.6440428785692e-53!GO:0043234;protein complex;4.0155066012641e-53!GO:0019538;protein metabolic process;5.86652252976113e-53!GO:0003735;structural constituent of ribosome;1.13104520720008e-52!GO:0006396;RNA processing;3.13274459204908e-51!GO:0044429;mitochondrial part;6.58544016581379e-50!GO:0009058;biosynthetic process;3.03463585456122e-49!GO:0044260;cellular macromolecule metabolic process;8.07949172368767e-47!GO:0044267;cellular protein metabolic process;2.17824929716479e-46!GO:0044249;cellular biosynthetic process;2.14640957575387e-45!GO:0033279;ribosomal subunit;4.59463730369743e-45!GO:0009059;macromolecule biosynthetic process;5.55599409357848e-45!GO:0031967;organelle envelope;1.71036172996974e-44!GO:0015031;protein transport;2.04411054679717e-44!GO:0033036;macromolecule localization;2.86069024536655e-44!GO:0031975;envelope;3.46932333679318e-44!GO:0031981;nuclear lumen;1.46228720001401e-43!GO:0005829;cytosol;8.7759453078958e-42!GO:0045184;establishment of protein localization;3.83314046007405e-41!GO:0008104;protein localization;4.79728115591486e-41!GO:0043283;biopolymer metabolic process;1.40805931811563e-40!GO:0043228;non-membrane-bound organelle;9.46308407698593e-39!GO:0043232;intracellular non-membrane-bound organelle;9.46308407698593e-39!GO:0016071;mRNA metabolic process;5.75889957401149e-37!GO:0010467;gene expression;6.12006070262879e-37!GO:0008380;RNA splicing;3.3465689727572e-36!GO:0006996;organelle organization and biogenesis;1.66551212083276e-35!GO:0046907;intracellular transport;4.52375112571244e-35!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.49719129434219e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.50676003769794e-35!GO:0065003;macromolecular complex assembly;1.13031331526447e-33!GO:0006397;mRNA processing;6.36881841087521e-33!GO:0005740;mitochondrial envelope;9.19140582955751e-33!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.27848972216375e-32!GO:0031966;mitochondrial membrane;1.43337677952423e-30!GO:0022607;cellular component assembly;3.28896330754125e-30!GO:0019866;organelle inner membrane;2.86125233001098e-29!GO:0006886;intracellular protein transport;5.83865865153997e-29!GO:0006259;DNA metabolic process;2.59965564167945e-28!GO:0007049;cell cycle;9.77746124487575e-28!GO:0005743;mitochondrial inner membrane;3.41809920934477e-27!GO:0005681;spliceosome;2.29024706547664e-26!GO:0044445;cytosolic part;1.65522187527756e-25!GO:0005654;nucleoplasm;2.48137032717451e-25!GO:0006119;oxidative phosphorylation;1.30834395525993e-23!GO:0015935;small ribosomal subunit;2.78324741777219e-23!GO:0006457;protein folding;5.18323334027047e-23!GO:0016462;pyrophosphatase activity;6.02277838062507e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.8317554823963e-23!GO:0015934;large ribosomal subunit;7.88844002634735e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;1.28621811909698e-22!GO:0051649;establishment of cellular localization;1.55653642401373e-22!GO:0005783;endoplasmic reticulum;1.90108385630254e-22!GO:0051641;cellular localization;2.0070403994968e-22!GO:0044455;mitochondrial membrane part;2.09492389247217e-22!GO:0000166;nucleotide binding;2.62960716701303e-22!GO:0000278;mitotic cell cycle;2.9841387764156e-22!GO:0017111;nucleoside-triphosphatase activity;3.35381986866223e-22!GO:0012505;endomembrane system;5.0804475245362e-22!GO:0022402;cell cycle process;1.85714871765589e-21!GO:0031980;mitochondrial lumen;4.30167104519598e-21!GO:0005759;mitochondrial matrix;4.30167104519598e-21!GO:0044451;nucleoplasm part;2.92225956267468e-20!GO:0005730;nucleolus;6.89192344121863e-20!GO:0048770;pigment granule;5.42707000825227e-19!GO:0042470;melanosome;5.42707000825227e-19!GO:0022618;protein-RNA complex assembly;7.63502587204793e-19!GO:0005746;mitochondrial respiratory chain;9.02870199368767e-19!GO:0003676;nucleic acid binding;5.71554587432949e-18!GO:0044432;endoplasmic reticulum part;6.03359439675493e-18!GO:0005761;mitochondrial ribosome;1.40341934483238e-17!GO:0000313;organellar ribosome;1.40341934483238e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.14381979236016e-17!GO:0000087;M phase of mitotic cell cycle;2.23098841251962e-17!GO:0007067;mitosis;4.08610533102881e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.068183095069e-17!GO:0000502;proteasome complex (sensu Eukaryota);8.07201164262603e-17!GO:0005794;Golgi apparatus;9.4225888660237e-17!GO:0042254;ribosome biogenesis and assembly;9.48884285524657e-17!GO:0005694;chromosome;1.28573393381556e-16!GO:0006974;response to DNA damage stimulus;1.28861841144275e-16!GO:0051301;cell division;1.49999035662363e-16!GO:0022403;cell cycle phase;2.38718561641553e-16!GO:0050136;NADH dehydrogenase (quinone) activity;3.08963992067666e-16!GO:0003954;NADH dehydrogenase activity;3.08963992067666e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.08963992067666e-16!GO:0051186;cofactor metabolic process;4.26029060945431e-16!GO:0032553;ribonucleotide binding;4.26947232912781e-16!GO:0032555;purine ribonucleotide binding;4.26947232912781e-16!GO:0016874;ligase activity;4.71452401404625e-16!GO:0008135;translation factor activity, nucleic acid binding;7.81036119821312e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.40195771136303e-16!GO:0017076;purine nucleotide binding;8.65638756783201e-16!GO:0044265;cellular macromolecule catabolic process;1.64293710853631e-15!GO:0044427;chromosomal part;2.24111563256199e-15!GO:0043285;biopolymer catabolic process;7.02268568688399e-15!GO:0006512;ubiquitin cycle;9.3856336172427e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.01405577210574e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.58494473851761e-14!GO:0042773;ATP synthesis coupled electron transport;1.58494473851761e-14!GO:0006605;protein targeting;1.65526887667423e-14!GO:0019941;modification-dependent protein catabolic process;1.69296205152884e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.69296205152884e-14!GO:0008134;transcription factor binding;2.00339355809135e-14!GO:0051082;unfolded protein binding;2.00889410867835e-14!GO:0030964;NADH dehydrogenase complex (quinone);2.35587758771694e-14!GO:0045271;respiratory chain complex I;2.35587758771694e-14!GO:0005747;mitochondrial respiratory chain complex I;2.35587758771694e-14!GO:0009057;macromolecule catabolic process;2.63721771941558e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.63721771941558e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.63721771941558e-14!GO:0044257;cellular protein catabolic process;2.63721771941558e-14!GO:0006281;DNA repair;6.21379375020087e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.57202578174509e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;7.56793025726908e-14!GO:0000375;RNA splicing, via transesterification reactions;7.56793025726908e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.56793025726908e-14!GO:0048193;Golgi vesicle transport;1.74027313186201e-13!GO:0000279;M phase;2.14260492154582e-13!GO:0030163;protein catabolic process;2.14260492154582e-13!GO:0044248;cellular catabolic process;2.25423931718776e-13!GO:0016192;vesicle-mediated transport;2.9983932231252e-13!GO:0016070;RNA metabolic process;6.63310178909146e-13!GO:0009719;response to endogenous stimulus;8.58069910999212e-13!GO:0003743;translation initiation factor activity;9.6274155243095e-13!GO:0005635;nuclear envelope;1.2330648230849e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.43791419894778e-12!GO:0006260;DNA replication;2.01573281432987e-12!GO:0012501;programmed cell death;2.19035232717584e-12!GO:0006732;coenzyme metabolic process;2.47468874096601e-12!GO:0005789;endoplasmic reticulum membrane;3.83128485301458e-12!GO:0006413;translational initiation;4.39218731840716e-12!GO:0005524;ATP binding;4.41773106813332e-12!GO:0006915;apoptosis;4.83115926417206e-12!GO:0043412;biopolymer modification;5.36385795541797e-12!GO:0044453;nuclear membrane part;6.30106342016317e-12!GO:0031965;nuclear membrane;7.85556310680088e-12!GO:0009055;electron carrier activity;8.84699865880094e-12!GO:0032559;adenyl ribonucleotide binding;9.69955879918584e-12!GO:0051276;chromosome organization and biogenesis;1.07645308675876e-11!GO:0000074;regulation of progression through cell cycle;1.21911567348747e-11!GO:0009259;ribonucleotide metabolic process;1.30314136375601e-11!GO:0051726;regulation of cell cycle;1.35134211245178e-11!GO:0006364;rRNA processing;2.23157224191718e-11!GO:0030554;adenyl nucleotide binding;2.45676233727597e-11!GO:0006399;tRNA metabolic process;3.17040618501913e-11!GO:0006163;purine nucleotide metabolic process;4.45750892000302e-11!GO:0016072;rRNA metabolic process;5.83184325120719e-11!GO:0008219;cell death;9.59276629212025e-11!GO:0016265;death;9.59276629212025e-11!GO:0005793;ER-Golgi intermediate compartment;1.0480165801482e-10!GO:0006464;protein modification process;1.30355458657579e-10!GO:0016887;ATPase activity;1.53472826240082e-10!GO:0009150;purine ribonucleotide metabolic process;1.55590219027143e-10!GO:0042623;ATPase activity, coupled;1.78275442809188e-10!GO:0009260;ribonucleotide biosynthetic process;2.84281385108099e-10!GO:0006164;purine nucleotide biosynthetic process;3.1885724041324e-10!GO:0016604;nuclear body;4.19341685362481e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.91876188087242e-10!GO:0048523;negative regulation of cellular process;5.0685901785215e-10!GO:0003924;GTPase activity;5.35904208416164e-10!GO:0065004;protein-DNA complex assembly;8.44939495118381e-10!GO:0006446;regulation of translational initiation;8.86189833135393e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.07107679304625e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.15888019935053e-09!GO:0009141;nucleoside triphosphate metabolic process;1.27955644270348e-09!GO:0006913;nucleocytoplasmic transport;1.50456091799624e-09!GO:0005643;nuclear pore;1.62413183916116e-09!GO:0003712;transcription cofactor activity;1.75259128963588e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.43193962804677e-09!GO:0009144;purine nucleoside triphosphate metabolic process;2.43193962804677e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.71426251385383e-09!GO:0065002;intracellular protein transport across a membrane;2.76066086326532e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;3.12558752742492e-09!GO:0006461;protein complex assembly;3.29530398850434e-09!GO:0051169;nuclear transport;3.67708657076815e-09!GO:0009060;aerobic respiration;4.26244924411114e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.48547750719269e-09!GO:0008565;protein transporter activity;5.65959976934731e-09!GO:0030532;small nuclear ribonucleoprotein complex;8.85363990150803e-09!GO:0006323;DNA packaging;9.31440259109873e-09!GO:0006333;chromatin assembly or disassembly;1.08407927110353e-08!GO:0005788;endoplasmic reticulum lumen;1.378732021168e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.44496561561192e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.44496561561192e-08!GO:0046930;pore complex;1.53617570537532e-08!GO:0045333;cellular respiration;1.55656874996951e-08!GO:0015986;ATP synthesis coupled proton transport;1.74999739243907e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.74999739243907e-08!GO:0006334;nucleosome assembly;1.95756094718282e-08!GO:0051246;regulation of protein metabolic process;2.0261533036813e-08!GO:0000785;chromatin;2.18687193783383e-08!GO:0043687;post-translational protein modification;2.36566680691863e-08!GO:0048519;negative regulation of biological process;2.54600128279394e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.79273427545433e-08!GO:0046034;ATP metabolic process;2.95798944852954e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.00347409782084e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.00347409782084e-08!GO:0051188;cofactor biosynthetic process;3.05551071803758e-08!GO:0008639;small protein conjugating enzyme activity;3.05551071803758e-08!GO:0004386;helicase activity;3.83345638549076e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.06434530538362e-08!GO:0004812;aminoacyl-tRNA ligase activity;4.06434530538362e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.06434530538362e-08!GO:0050657;nucleic acid transport;5.09085692282889e-08!GO:0051236;establishment of RNA localization;5.09085692282889e-08!GO:0050658;RNA transport;5.09085692282889e-08!GO:0015630;microtubule cytoskeleton;5.49587274659559e-08!GO:0008026;ATP-dependent helicase activity;5.61296137335383e-08!GO:0006403;RNA localization;5.62011177894015e-08!GO:0009056;catabolic process;5.97256493683679e-08!GO:0004842;ubiquitin-protein ligase activity;6.38427561144282e-08!GO:0019787;small conjugating protein ligase activity;6.51724508357459e-08!GO:0043038;amino acid activation;6.57759096091454e-08!GO:0006418;tRNA aminoacylation for protein translation;6.57759096091454e-08!GO:0043039;tRNA aminoacylation;6.57759096091454e-08!GO:0016491;oxidoreductase activity;7.80716083365483e-08!GO:0016853;isomerase activity;8.52782177554635e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.72795292875281e-08!GO:0019829;cation-transporting ATPase activity;9.76407147877242e-08!GO:0031497;chromatin assembly;1.12826406223807e-07!GO:0017038;protein import;1.3158817640284e-07!GO:0009117;nucleotide metabolic process;1.31901317971524e-07!GO:0005525;GTP binding;1.39063041370606e-07!GO:0003697;single-stranded DNA binding;1.4407661496454e-07!GO:0006366;transcription from RNA polymerase II promoter;1.45805446524953e-07!GO:0016607;nuclear speck;1.69329170210908e-07!GO:0006099;tricarboxylic acid cycle;1.84444047835763e-07!GO:0046356;acetyl-CoA catabolic process;1.84444047835763e-07!GO:0016740;transferase activity;1.86911569960013e-07!GO:0043566;structure-specific DNA binding;1.88897965156848e-07!GO:0044431;Golgi apparatus part;1.89229075759417e-07!GO:0007005;mitochondrion organization and biogenesis;2.77795821444862e-07!GO:0006754;ATP biosynthetic process;3.34931646366735e-07!GO:0006753;nucleoside phosphate metabolic process;3.34931646366735e-07!GO:0043067;regulation of programmed cell death;3.96934588273918e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.28509454881002e-07!GO:0000775;chromosome, pericentric region;4.38686533685824e-07!GO:0030120;vesicle coat;4.3960334260491e-07!GO:0030662;coated vesicle membrane;4.3960334260491e-07!GO:0051187;cofactor catabolic process;4.60394444872441e-07!GO:0050794;regulation of cellular process;4.71018605647668e-07!GO:0042981;regulation of apoptosis;5.05039721674866e-07!GO:0009109;coenzyme catabolic process;5.84919885027631e-07!GO:0006084;acetyl-CoA metabolic process;6.71694873321631e-07!GO:0015078;hydrogen ion transmembrane transporter activity;7.42039459119307e-07!GO:0005768;endosome;7.50252728807959e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.66616681306781e-07!GO:0016023;cytoplasmic membrane-bound vesicle;7.88495196241783e-07!GO:0016779;nucleotidyltransferase activity;7.95780616515381e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.34819766607411e-07!GO:0005819;spindle;8.92608068205924e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.02687355273648e-07!GO:0016881;acid-amino acid ligase activity;9.24034859308595e-07!GO:0031988;membrane-bound vesicle;9.52930213796373e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.04976991896337e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.12670538270118e-06!GO:0048475;coated membrane;1.32936014892092e-06!GO:0030117;membrane coat;1.32936014892092e-06!GO:0045259;proton-transporting ATP synthase complex;1.36196813026746e-06!GO:0032561;guanyl ribonucleotide binding;1.43192461463093e-06!GO:0019001;guanyl nucleotide binding;1.43192461463093e-06!GO:0043069;negative regulation of programmed cell death;1.44230674015243e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.69642653972463e-06!GO:0016859;cis-trans isomerase activity;1.75053967721388e-06!GO:0009108;coenzyme biosynthetic process;1.79460447684188e-06!GO:0006752;group transfer coenzyme metabolic process;1.90604316139703e-06!GO:0005667;transcription factor complex;1.97140505954565e-06!GO:0051028;mRNA transport;2.01968262746531e-06!GO:0005762;mitochondrial large ribosomal subunit;2.40614703461719e-06!GO:0000315;organellar large ribosomal subunit;2.40614703461719e-06!GO:0043066;negative regulation of apoptosis;3.43484646900778e-06!GO:0051329;interphase of mitotic cell cycle;3.73725888891069e-06!GO:0000245;spliceosome assembly;3.97345772136997e-06!GO:0008654;phospholipid biosynthetic process;4.59372739249126e-06!GO:0051325;interphase;4.67044476991524e-06!GO:0006613;cotranslational protein targeting to membrane;4.70037757142365e-06!GO:0006916;anti-apoptosis;5.82005023300687e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.43360798050711e-06!GO:0016787;hydrolase activity;7.09563949523043e-06!GO:0004298;threonine endopeptidase activity;7.36413183218683e-06!GO:0045454;cell redox homeostasis;7.41736028410171e-06!GO:0003899;DNA-directed RNA polymerase activity;8.3291507978803e-06!GO:0031982;vesicle;8.33920624900608e-06!GO:0007051;spindle organization and biogenesis;8.70701855701729e-06!GO:0031410;cytoplasmic vesicle;8.78060271807253e-06!GO:0008361;regulation of cell size;1.04984103256794e-05!GO:0003714;transcription corepressor activity;1.11976993075645e-05!GO:0032446;protein modification by small protein conjugation;1.14797754944133e-05!GO:0016049;cell growth;1.15460212319749e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.19870875548221e-05!GO:0031324;negative regulation of cellular metabolic process;1.21526917981687e-05!GO:0003724;RNA helicase activity;1.26040966849624e-05!GO:0019843;rRNA binding;1.31844495689301e-05!GO:0000314;organellar small ribosomal subunit;1.42782642781791e-05!GO:0005763;mitochondrial small ribosomal subunit;1.42782642781791e-05!GO:0000139;Golgi membrane;1.48761880882351e-05!GO:0043623;cellular protein complex assembly;1.56660950604774e-05!GO:0006793;phosphorus metabolic process;1.58768262304023e-05!GO:0006796;phosphate metabolic process;1.58768262304023e-05!GO:0031252;leading edge;1.59165138759138e-05!GO:0007010;cytoskeleton organization and biogenesis;1.5948029932566e-05!GO:0016567;protein ubiquitination;1.68489249000795e-05!GO:0005770;late endosome;1.9798852131628e-05!GO:0001558;regulation of cell growth;2.22861023275002e-05!GO:0030867;rough endoplasmic reticulum membrane;2.38796376071355e-05!GO:0045786;negative regulation of progression through cell cycle;2.47640121465914e-05!GO:0005813;centrosome;2.62801193351735e-05!GO:0005798;Golgi-associated vesicle;2.68996839549229e-05!GO:0031968;organelle outer membrane;2.73192140477362e-05!GO:0016310;phosphorylation;3.03511261122942e-05!GO:0000075;cell cycle checkpoint;3.30961290224618e-05!GO:0000151;ubiquitin ligase complex;3.38291100673539e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.40129821299239e-05!GO:0006261;DNA-dependent DNA replication;3.83194634436953e-05!GO:0044440;endosomal part;4.00520488800707e-05!GO:0010008;endosome membrane;4.00520488800707e-05!GO:0015980;energy derivation by oxidation of organic compounds;4.08953099647481e-05!GO:0019867;outer membrane;4.21380514275425e-05!GO:0043021;ribonucleoprotein binding;4.64414705473228e-05!GO:0050789;regulation of biological process;4.9893990336888e-05!GO:0006612;protein targeting to membrane;5.00391495740882e-05!GO:0051170;nuclear import;5.06772986101995e-05!GO:0016564;transcription repressor activity;5.31622607091597e-05!GO:0005815;microtubule organizing center;5.32232668551468e-05!GO:0009892;negative regulation of metabolic process;6.03369736927793e-05!GO:0048522;positive regulation of cellular process;6.57737915115167e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;6.98817129651657e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.0993300702752e-05!GO:0005773;vacuole;7.70240004855989e-05!GO:0006091;generation of precursor metabolites and energy;9.02878785902164e-05!GO:0005741;mitochondrial outer membrane;9.48462824915387e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;9.49765491668698e-05!GO:0016563;transcription activator activity;0.000105664524480308!GO:0005769;early endosome;0.00011102861382479!GO:0043681;protein import into mitochondrion;0.000123277398315749!GO:0003713;transcription coactivator activity;0.00012557543130612!GO:0006606;protein import into nucleus;0.00012986845094916!GO:0000786;nucleosome;0.000141417956471088!GO:0033116;ER-Golgi intermediate compartment membrane;0.00014851949370295!GO:0005657;replication fork;0.000151067082809689!GO:0051789;response to protein stimulus;0.000151067082809689!GO:0006986;response to unfolded protein;0.000151067082809689!GO:0008033;tRNA processing;0.000151067082809689!GO:0009165;nucleotide biosynthetic process;0.000152888457684336!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000153840702665964!GO:0005905;coated pit;0.000195790721841301!GO:0044452;nucleolar part;0.000207831329729383!GO:0008094;DNA-dependent ATPase activity;0.000211659686849176!GO:0006626;protein targeting to mitochondrion;0.000225483798153769!GO:0005885;Arp2/3 protein complex;0.000231196735122878!GO:0046474;glycerophospholipid biosynthetic process;0.000231636099185689!GO:0016126;sterol biosynthetic process;0.000239779678677108!GO:0016044;membrane organization and biogenesis;0.000247004334059222!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000261931139745308!GO:0008186;RNA-dependent ATPase activity;0.000268130437638351!GO:0006950;response to stress;0.000275035207227226!GO:0016363;nuclear matrix;0.000278118932323677!GO:0030029;actin filament-based process;0.000345504622810023!GO:0051427;hormone receptor binding;0.000350102644865099!GO:0016568;chromatin modification;0.000366822307928125!GO:0008250;oligosaccharyl transferase complex;0.000398999919701675!GO:0000323;lytic vacuole;0.000400843684649287!GO:0005764;lysosome;0.000400843684649287!GO:0000776;kinetochore;0.000424967921010203!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00042507354561565!GO:0004576;oligosaccharyl transferase activity;0.000431693539597618!GO:0019899;enzyme binding;0.000475533990455083!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000495198669787892!GO:0005048;signal sequence binding;0.000532098169462586!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000534613841556166!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000550858253744533!GO:0051168;nuclear export;0.000560685466248506!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00063824695754893!GO:0006302;double-strand break repair;0.000639090894190707!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000659384284357074!GO:0007006;mitochondrial membrane organization and biogenesis;0.000674463284889636!GO:0004004;ATP-dependent RNA helicase activity;0.000690216418422872!GO:0006383;transcription from RNA polymerase III promoter;0.000691605206248889!GO:0035257;nuclear hormone receptor binding;0.000691806175281981!GO:0051920;peroxiredoxin activity;0.000750340638775244!GO:0051087;chaperone binding;0.000755829079966062!GO:0018196;peptidyl-asparagine modification;0.000761253209870366!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000761253209870366!GO:0006414;translational elongation;0.000770938143642205!GO:0030663;COPI coated vesicle membrane;0.000795204155950036!GO:0030126;COPI vesicle coat;0.000795204155950036!GO:0005791;rough endoplasmic reticulum;0.000810954284532281!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000816869405346932!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000870414786783004!GO:0051252;regulation of RNA metabolic process;0.000907777860567078!GO:0008610;lipid biosynthetic process;0.000907777860567078!GO:0030133;transport vesicle;0.000961578891843715!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000968511017667398!GO:0003690;double-stranded DNA binding;0.000973779797558079!GO:0065009;regulation of a molecular function;0.000995675562040418!GO:0046467;membrane lipid biosynthetic process;0.000996607882297638!GO:0007088;regulation of mitosis;0.00105078672072183!GO:0007243;protein kinase cascade;0.00107744385384924!GO:0044262;cellular carbohydrate metabolic process;0.00114086257260631!GO:0031072;heat shock protein binding;0.00122741131718862!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00124643175603175!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00124643175603175!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00124643175603175!GO:0046489;phosphoinositide biosynthetic process;0.00130906311682156!GO:0007093;mitotic cell cycle checkpoint;0.00131790623845808!GO:0008092;cytoskeletal protein binding;0.00133594321841273!GO:0030176;integral to endoplasmic reticulum membrane;0.00134369581606724!GO:0007059;chromosome segregation;0.00143597072999382!GO:0003729;mRNA binding;0.00144508802393877!GO:0003684;damaged DNA binding;0.00152323913247009!GO:0006839;mitochondrial transport;0.00155957237220007!GO:0048500;signal recognition particle;0.00159758761644203!GO:0015631;tubulin binding;0.00164753509504893!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00164821202655949!GO:0030880;RNA polymerase complex;0.00168913213292706!GO:0030137;COPI-coated vesicle;0.00169024156212301!GO:0006695;cholesterol biosynthetic process;0.0017252978902272!GO:0040008;regulation of growth;0.00181880734797903!GO:0000082;G1/S transition of mitotic cell cycle;0.00193170210383335!GO:0008312;7S RNA binding;0.00218067875460182!GO:0008180;signalosome;0.00225823554700954!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00248472251844973!GO:0005684;U2-dependent spliceosome;0.00251951505887753!GO:0000059;protein import into nucleus, docking;0.00259742892754142!GO:0042802;identical protein binding;0.00272472912927003!GO:0048487;beta-tubulin binding;0.00272472912927003!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00275625796794817!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00286829998139902!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00286829998139902!GO:0016481;negative regulation of transcription;0.00309899616653948!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00313154002943736!GO:0007052;mitotic spindle organization and biogenesis;0.0032742793490198!GO:0046483;heterocycle metabolic process;0.00342992408405589!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00345065737551711!GO:0045047;protein targeting to ER;0.00345065737551711!GO:0000049;tRNA binding;0.00348510397752117!GO:0006891;intra-Golgi vesicle-mediated transport;0.00363239945283718!GO:0043488;regulation of mRNA stability;0.00363587878096932!GO:0043487;regulation of RNA stability;0.00363587878096932!GO:0043284;biopolymer biosynthetic process;0.00363628650195971!GO:0051052;regulation of DNA metabolic process;0.00377328692256499!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00384900149316325!GO:0015399;primary active transmembrane transporter activity;0.00384900149316325!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00391147183291856!GO:0015002;heme-copper terminal oxidase activity;0.00391147183291856!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00391147183291856!GO:0004129;cytochrome-c oxidase activity;0.00391147183291856!GO:0007050;cell cycle arrest;0.0039541076851338!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00398230021926489!GO:0000428;DNA-directed RNA polymerase complex;0.00398230021926489!GO:0048518;positive regulation of biological process;0.00406285462665672!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00416975907320028!GO:0005874;microtubule;0.00472572054968104!GO:0008632;apoptotic program;0.00478420038262314!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00478424404354928!GO:0005637;nuclear inner membrane;0.0048906007016708!GO:0030027;lamellipodium;0.00493072493951332!GO:0048471;perinuclear region of cytoplasm;0.00507996321437436!GO:0003711;transcription elongation regulator activity;0.00515082766064244!GO:0005869;dynactin complex;0.00515513171595949!GO:0006310;DNA recombination;0.00534576492685116!GO:0016197;endosome transport;0.00565394821111308!GO:0016272;prefoldin complex;0.00566638900211985!GO:0008139;nuclear localization sequence binding;0.00566805998575828!GO:0048468;cell development;0.00603888342366375!GO:0030658;transport vesicle membrane;0.00604737106958284!GO:0006509;membrane protein ectodomain proteolysis;0.00630264526870726!GO:0033619;membrane protein proteolysis;0.00630264526870726!GO:0006595;polyamine metabolic process;0.00630264526870726!GO:0000910;cytokinesis;0.00641305229095949!GO:0009116;nucleoside metabolic process;0.00665311768396337!GO:0006650;glycerophospholipid metabolic process;0.0066886584845401!GO:0035258;steroid hormone receptor binding;0.00679884398434129!GO:0004518;nuclease activity;0.00683565800012788!GO:0003682;chromatin binding;0.0071576994767429!GO:0046519;sphingoid metabolic process;0.00720689967158162!GO:0030521;androgen receptor signaling pathway;0.00747687806230674!GO:0031418;L-ascorbic acid binding;0.00749021409350084!GO:0007264;small GTPase mediated signal transduction;0.00761354861161733!GO:0051539;4 iron, 4 sulfur cluster binding;0.00779570477027127!GO:0043022;ribosome binding;0.00812969472796293!GO:0001726;ruffle;0.00851592334221412!GO:0032508;DNA duplex unwinding;0.00853341391361615!GO:0032392;DNA geometric change;0.00853341391361615!GO:0006402;mRNA catabolic process;0.00866110456571728!GO:0008168;methyltransferase activity;0.00871304902837134!GO:0006352;transcription initiation;0.00871304902837134!GO:0006405;RNA export from nucleus;0.00880364302878011!GO:0030659;cytoplasmic vesicle membrane;0.00880364302878011!GO:0030134;ER to Golgi transport vesicle;0.00884649206740945!GO:0030118;clathrin coat;0.0090075223980817!GO:0051101;regulation of DNA binding;0.00919398214027992!GO:0008047;enzyme activator activity;0.00936489418701402!GO:0031124;mRNA 3'-end processing;0.00952232540090364!GO:0000178;exosome (RNase complex);0.00952232540090364!GO:0006401;RNA catabolic process;0.00967932330370428!GO:0051287;NAD binding;0.00969795661378104!GO:0005862;muscle thin filament tropomyosin;0.00972987041399797!GO:0006979;response to oxidative stress;0.0097607272712588!GO:0006289;nucleotide-excision repair;0.00983257884486314!GO:0017166;vinculin binding;0.00983257884486314!GO:0016741;transferase activity, transferring one-carbon groups;0.00983763328450821!GO:0015992;proton transport;0.00987219232399481!GO:0006220;pyrimidine nucleotide metabolic process;0.00989810926833269!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0100377963017831!GO:0006144;purine base metabolic process;0.0101248297241432!GO:0030041;actin filament polymerization;0.0101508910820228!GO:0033673;negative regulation of kinase activity;0.0102557672776158!GO:0006469;negative regulation of protein kinase activity;0.0102557672776158!GO:0003678;DNA helicase activity;0.0104572875932392!GO:0051128;regulation of cellular component organization and biogenesis;0.0105055209125192!GO:0051540;metal cluster binding;0.0106328954743567!GO:0051536;iron-sulfur cluster binding;0.0106328954743567!GO:0045792;negative regulation of cell size;0.010684417413273!GO:0005832;chaperonin-containing T-complex;0.0107739938559257!GO:0003746;translation elongation factor activity;0.0107801899759093!GO:0006818;hydrogen transport;0.0107841728666225!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0107841728666225!GO:0009112;nucleobase metabolic process;0.010829283179118!GO:0008022;protein C-terminus binding;0.0108571513548109!GO:0000339;RNA cap binding;0.0108884444772007!GO:0019222;regulation of metabolic process;0.0111423539302191!GO:0030308;negative regulation of cell growth;0.011209201171541!GO:0050662;coenzyme binding;0.0112121897245039!GO:0003756;protein disulfide isomerase activity;0.0112597588959585!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0112597588959585!GO:0006672;ceramide metabolic process;0.0113744702892177!GO:0030833;regulation of actin filament polymerization;0.0113744702892177!GO:0051098;regulation of binding;0.0113847368114139!GO:0006497;protein amino acid lipidation;0.0114717358937491!GO:0004527;exonuclease activity;0.0114886984435115!GO:0031901;early endosome membrane;0.0116914733056079!GO:0007021;tubulin folding;0.0117228387265888!GO:0004177;aminopeptidase activity;0.01189446250466!GO:0006268;DNA unwinding during replication;0.011946175418019!GO:0030145;manganese ion binding;0.0120549720532491!GO:0065007;biological regulation;0.012132122480695!GO:0030132;clathrin coat of coated pit;0.0125039749746854!GO:0030660;Golgi-associated vesicle membrane;0.012610948657187!GO:0016408;C-acyltransferase activity;0.0126643278788218!GO:0006506;GPI anchor biosynthetic process;0.0126689458980892!GO:0051348;negative regulation of transferase activity;0.0127841049723009!GO:0042158;lipoprotein biosynthetic process;0.0127841049723009!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0129950304906804!GO:0030384;phosphoinositide metabolic process;0.0130312325511502!GO:0019206;nucleoside kinase activity;0.0130417756990735!GO:0031543;peptidyl-proline dioxygenase activity;0.0131108084183713!GO:0016251;general RNA polymerase II transcription factor activity;0.013297353605043!GO:0005758;mitochondrial intermembrane space;0.0135500062576028!GO:0006082;organic acid metabolic process;0.0139742098267137!GO:0006417;regulation of translation;0.014252684952683!GO:0019752;carboxylic acid metabolic process;0.0143064476592792!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0143450998044339!GO:0009967;positive regulation of signal transduction;0.0143450998044339!GO:0008283;cell proliferation;0.0146399639561741!GO:0031970;organelle envelope lumen;0.0147409809231111!GO:0044433;cytoplasmic vesicle part;0.0147654274758942!GO:0016860;intramolecular oxidoreductase activity;0.0153114052756936!GO:0006778;porphyrin metabolic process;0.0154543193472162!GO:0033013;tetrapyrrole metabolic process;0.0154543193472162!GO:0030127;COPII vesicle coat;0.0155311303472717!GO:0012507;ER to Golgi transport vesicle membrane;0.0155311303472717!GO:0006284;base-excision repair;0.0158934354017028!GO:0005876;spindle microtubule;0.0160730566551658!GO:0032984;macromolecular complex disassembly;0.016688753186003!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0166974872137921!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0166974872137921!GO:0006007;glucose catabolic process;0.0166974872137921!GO:0009303;rRNA transcription;0.0170457806176241!GO:0006740;NADPH regeneration;0.0170676761515214!GO:0006098;pentose-phosphate shunt;0.0170676761515214!GO:0030496;midbody;0.0172369869014251!GO:0006505;GPI anchor metabolic process;0.0172580459086253!GO:0050790;regulation of catalytic activity;0.0174144956386016!GO:0007034;vacuolar transport;0.0176767991874132!GO:0006275;regulation of DNA replication;0.0178616813970149!GO:0043065;positive regulation of apoptosis;0.0186812052391813!GO:0048144;fibroblast proliferation;0.018705457389217!GO:0048145;regulation of fibroblast proliferation;0.018705457389217!GO:0000096;sulfur amino acid metabolic process;0.0196139096589031!GO:0015036;disulfide oxidoreductase activity;0.0198833785078114!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0199465516118124!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0200521715944766!GO:0016584;nucleosome positioning;0.0203478728985525!GO:0004532;exoribonuclease activity;0.020479838262357!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.020479838262357!GO:0007346;regulation of progression through mitotic cell cycle;0.0204811182900359!GO:0006643;membrane lipid metabolic process;0.0205651220533051!GO:0043068;positive regulation of programmed cell death;0.021695353195083!GO:0019798;procollagen-proline dioxygenase activity;0.0217255952401591!GO:0006378;mRNA polyadenylation;0.0218317750442899!GO:0007040;lysosome organization and biogenesis;0.0218673161840439!GO:0006520;amino acid metabolic process;0.0221163420035532!GO:0005669;transcription factor TFIID complex;0.0221540988094572!GO:0007033;vacuole organization and biogenesis;0.022642956696443!GO:0008154;actin polymerization and/or depolymerization;0.022943081874037!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0240418446614848!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.024184521638435!GO:0033043;regulation of organelle organization and biogenesis;0.024184521638435!GO:0008147;structural constituent of bone;0.0242462876393316!GO:0045045;secretory pathway;0.0245762011340287!GO:0006611;protein export from nucleus;0.0248165250490471!GO:0043492;ATPase activity, coupled to movement of substances;0.0248387863325614!GO:0031301;integral to organelle membrane;0.0249036885928007!GO:0031902;late endosome membrane;0.0249500403961125!GO:0007017;microtubule-based process;0.0253067219618851!GO:0008652;amino acid biosynthetic process;0.0260188307849202!GO:0031625;ubiquitin protein ligase binding;0.0260589238865501!GO:0048146;positive regulation of fibroblast proliferation;0.0261047130002965!GO:0022890;inorganic cation transmembrane transporter activity;0.0262199846327724!GO:0008538;proteasome activator activity;0.0276978234713175!GO:0008637;apoptotic mitochondrial changes;0.028018827596416!GO:0043241;protein complex disassembly;0.0282633263267965!GO:0005092;GDP-dissociation inhibitor activity;0.0284786738275657!GO:0050681;androgen receptor binding;0.0284786738275657!GO:0006779;porphyrin biosynthetic process;0.0287769268072232!GO:0033014;tetrapyrrole biosynthetic process;0.0287769268072232!GO:0031272;regulation of pseudopodium formation;0.0287769268072232!GO:0031269;pseudopodium formation;0.0287769268072232!GO:0031344;regulation of cell projection organization and biogenesis;0.0287769268072232!GO:0031268;pseudopodium organization and biogenesis;0.0287769268072232!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0287769268072232!GO:0031274;positive regulation of pseudopodium formation;0.0287769268072232!GO:0043433;negative regulation of transcription factor activity;0.028992635257481!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0292679391597635!GO:0031529;ruffle organization and biogenesis;0.0293106976570022!GO:0009262;deoxyribonucleotide metabolic process;0.0293920238979091!GO:0012506;vesicle membrane;0.0294065556974077!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0295345801034951!GO:0022408;negative regulation of cell-cell adhesion;0.0295674254965938!GO:0043624;cellular protein complex disassembly;0.0297911286715121!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0300452962213814!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0300868250679128!GO:0006897;endocytosis;0.0302109286875822!GO:0010324;membrane invagination;0.0302109286875822!GO:0031371;ubiquitin conjugating enzyme complex;0.0302524150133439!GO:0008408;3'-5' exonuclease activity;0.0304848727520152!GO:0009889;regulation of biosynthetic process;0.0307810006844522!GO:0001952;regulation of cell-matrix adhesion;0.0307810006844522!GO:0000209;protein polyubiquitination;0.0311850308140115!GO:0031326;regulation of cellular biosynthetic process;0.0313103362735283!GO:0008243;plasminogen activator activity;0.0313403636242431!GO:0030508;thiol-disulfide exchange intermediate activity;0.0317879510492252!GO:0050811;GABA receptor binding;0.0321773125623808!GO:0005784;translocon complex;0.0322306140904516!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0326211502197655!GO:0009451;RNA modification;0.0328426037539782!GO:0045941;positive regulation of transcription;0.0329437344335666!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0333087174508699!GO:0030032;lamellipodium biogenesis;0.0336352740846267!GO:0042168;heme metabolic process;0.0339185498615054!GO:0001666;response to hypoxia;0.0339185498615054!GO:0031123;RNA 3'-end processing;0.0339185498615054!GO:0001872;zymosan binding;0.0339951407557349!GO:0001878;response to yeast;0.0339951407557349!GO:0051270;regulation of cell motility;0.0345818169330783!GO:0006892;post-Golgi vesicle-mediated transport;0.0347588246561441!GO:0045936;negative regulation of phosphate metabolic process;0.035117002532266!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.035347516326466!GO:0045039;protein import into mitochondrial inner membrane;0.035347516326466!GO:0030125;clathrin vesicle coat;0.0355008423764763!GO:0030665;clathrin coated vesicle membrane;0.0355008423764763!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0358590788246089!GO:0046128;purine ribonucleoside metabolic process;0.0361512029009923!GO:0042278;purine nucleoside metabolic process;0.0361512029009923!GO:0009124;nucleoside monophosphate biosynthetic process;0.0368421435588339!GO:0009123;nucleoside monophosphate metabolic process;0.0368421435588339!GO:0045892;negative regulation of transcription, DNA-dependent;0.0369654678121309!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0372339587258808!GO:0043596;nuclear replication fork;0.0372399447682138!GO:0030119;AP-type membrane coat adaptor complex;0.0375768734450846!GO:0005774;vacuolar membrane;0.0375930155724874!GO:0000287;magnesium ion binding;0.0383951402773876!GO:0030433;ER-associated protein catabolic process;0.0393083573024507!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0393083573024507!GO:0006118;electron transport;0.0394581384934946!GO:0045893;positive regulation of transcription, DNA-dependent;0.0394948991366252!GO:0030518;steroid hormone receptor signaling pathway;0.0395157243485323!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.040553439039828!GO:0000922;spindle pole;0.0416328652824179!GO:0047485;protein N-terminus binding;0.0417608766313073!GO:0008097;5S rRNA binding;0.0419493727619929!GO:0016407;acetyltransferase activity;0.0424866185353341!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0429462334360572!GO:0022411;cellular component disassembly;0.0429917357010363!GO:0003923;GPI-anchor transamidase activity;0.0431246561803006!GO:0016255;attachment of GPI anchor to protein;0.0431246561803006!GO:0042765;GPI-anchor transamidase complex;0.0431246561803006!GO:0030149;sphingolipid catabolic process;0.0432408046373232!GO:0030911;TPR domain binding;0.0432408046373232!GO:0006458;'de novo' protein folding;0.0434055903597233!GO:0051084;'de novo' posttranslational protein folding;0.0434055903597233!GO:0043086;negative regulation of catalytic activity;0.0436178410539224!GO:0045185;maintenance of protein localization;0.0436178410539224!GO:0006376;mRNA splice site selection;0.0436178410539224!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0436178410539224!GO:0001725;stress fiber;0.0438040829930488!GO:0032432;actin filament bundle;0.0438040829930488!GO:0006807;nitrogen compound metabolic process;0.0442205831233022!GO:0006266;DNA ligation;0.0442717326641621!GO:0035035;histone acetyltransferase binding;0.0447241415129607!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.045735704409637!GO:0032981;mitochondrial respiratory chain complex I assembly;0.045735704409637!GO:0010257;NADH dehydrogenase complex assembly;0.045735704409637!GO:0033108;mitochondrial respiratory chain complex assembly;0.045735704409637!GO:0043130;ubiquitin binding;0.04625974791937!GO:0032182;small conjugating protein binding;0.04625974791937!GO:0030031;cell projection biogenesis;0.0463048820560929!GO:0000725;recombinational repair;0.0471629995770129!GO:0000724;double-strand break repair via homologous recombination;0.0471629995770129!GO:0006541;glutamine metabolic process;0.0471933901758854!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0473902556971166!GO:0006066;alcohol metabolic process;0.0474366231071061!GO:0008629;induction of apoptosis by intracellular signals;0.0475352844040042!GO:0006354;RNA elongation;0.0480741989240963!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0481002397891846!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0481002397891846!GO:0042393;histone binding;0.0481219125299663!GO:0022415;viral reproductive process;0.0481864751247675!GO:0006221;pyrimidine nucleotide biosynthetic process;0.0483518365637667!GO:0004540;ribonuclease activity;0.0486713782048417!GO:0008320;protein transmembrane transporter activity;0.0487014104559769!GO:0005801;cis-Golgi network;0.0493572439465639!GO:0033559;unsaturated fatty acid metabolic process;0.049713310225168!GO:0006636;unsaturated fatty acid biosynthetic process;0.049713310225168!GO:0032507;maintenance of cellular protein localization;0.0497377156905061
|sample_id=11250
|sample_id=11250
|sample_note=
|sample_note=
Line 75: Line 105:
|sample_tissue=pulmonary artery
|sample_tissue=pulmonary artery
|top_motifs=POU3F1..4:1.4953447516;NKX2-2,8:1.36135383965;HSF1,2:1.35420057609;HOX{A5,B5}:1.18518998145;HMGA1,2:1.1754778892;EN1,2:1.15267096237;CDC5L:1.11135118421;NR3C1:1.10984865588;IKZF1:1.1085723244;FOX{I1,J2}:1.09389580666;NKX3-1:0.952840031487;SRF:0.938149443661;FOXD3:0.895550531795;MYBL2:0.849630879371;TAL1_TCF{3,4,12}:0.823250191423;TLX1..3_NFIC{dimer}:0.800409970768;AIRE:0.792194498941;ONECUT1,2:0.779798127046;UFEwm:0.726921268026;NFATC1..3:0.720051774982;E2F1..5:0.694415140679;LHX3,4:0.66661545036;PAX8:0.65081213814;TFAP4:0.646959829766;FOXL1:0.633929104854;TBP:0.631185308441;XCPE1{core}:0.616360224831;ZNF384:0.614242268108;TEAD1:0.614203739396;GLI1..3:0.601007466435;HIF1A:0.577348025462;GCM1,2:0.575484534329;GTF2A1,2:0.572991895288;PAX5:0.558012818844;ADNP_IRX_SIX_ZHX:0.557634237873;NKX2-1,4:0.552829294291;EVI1:0.551076403733;ARID5B:0.547672695675;MYB:0.539069455744;HBP1_HMGB_SSRP1_UBTF:0.490664239488;LEF1_TCF7_TCF7L1,2:0.488890433593;SOX{8,9,10}:0.468269206662;HES1:0.421349573214;TFDP1:0.398396977164;TEF:0.398092178799;TP53:0.397904970245;ZIC1..3:0.388916921468;RXR{A,B,G}:0.387313879411;AR:0.385119898535;POU5F1:0.382448018208;SMAD1..7,9:0.378007786891;PAX6:0.375173041619;CRX:0.36704920154;NR6A1:0.365702483394;GFI1B:0.356560370791;ALX4:0.33098705153;bHLH_family:0.323525632929;SOX2:0.316712465311;ZNF148:0.312594690904;ZNF423:0.311097808836;GFI1:0.30778182159;NKX3-2:0.307675180492;T:0.288427495716;STAT5{A,B}:0.282175485976;TBX4,5:0.275585578831;XBP1:0.268448034899;POU1F1:0.263586616545;NFY{A,B,C}:0.256840229756;KLF4:0.249636418028;ZNF143:0.225655178017;NFIX:0.205808507159;EBF1:0.195943893151;NR5A1,2:0.190864295323;FOXQ1:0.185265405094;GATA6:0.1690760016;ELF1,2,4:0.166991215303;HOX{A4,D4}:0.163732787834;ELK1,4_GABP{A,B1}:0.156572014566;HAND1,2:0.154335517786;ZNF238:0.151830761108;CDX1,2,4:0.148016333529;NFE2L2:0.141643745075;SOX17:0.134086679927;BACH2:0.13403060491;SOX5:0.119127612092;RXRA_VDR{dimer}:0.1022064499;NFE2L1:0.101545270987;HOXA9_MEIS1:0.0864338078287;MAFB:0.0826994850765;PBX1:0.0592424694576;STAT2,4,6:0.0558394245905;FOS_FOS{B,L1}_JUN{B,D}:0.054202352723;MEF2{A,B,C,D}:0.0480466798809;GTF2I:0.0375029037042;MAZ:0.0213715400215;NFIL3:0.0117221560489;PPARG:0.0112724319047;HLF:0.00983322845724;GATA4:-0.0138593765628;IKZF2:-0.0257038274867;NHLH1,2:-0.0361384539569;HNF1A:-0.0456910535933;PRRX1,2:-0.0497799465939;FOSL2:-0.0531391866545;ATF6:-0.0586382347659;REST:-0.0634461365045;GZF1:-0.0825085452291;NFE2:-0.0858986272882;BPTF:-0.0922790822504;NRF1:-0.108548938007;JUN:-0.113451799663;HNF4A_NR2F1,2:-0.115782265657;DBP:-0.130430793985;ZBTB6:-0.142530532695;PRDM1:-0.165046346817;OCT4_SOX2{dimer}:-0.175912443571;YY1:-0.176330067981;CEBPA,B_DDIT3:-0.179444992614;NKX2-3_NKX2-5:-0.186104032197;PAX4:-0.187193464985;PAX1,9:-0.19200914308;ETS1,2:-0.195076429803;MTE{core}:-0.198552637708;FOXM1:-0.205586773921;TFCP2:-0.209203941685;RFX1:-0.21245689452;AHR_ARNT_ARNT2:-0.226580473571;RUNX1..3:-0.230902473496;TOPORS:-0.231396518772;NANOG{mouse}:-0.233420609808;HIC1:-0.237750845383;PATZ1:-0.243975612981;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.246174711843;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.25957872844;NANOG:-0.261403681504;NFKB1_REL_RELA:-0.263448993625;SPZ1:-0.270059345015;FOXA2:-0.272574654745;EP300:-0.282895975931;MTF1:-0.303081927683;POU2F1..3:-0.305107199245;SP1:-0.312837203176;HMX1:-0.316222761475;STAT1,3:-0.322283770638;SPI1:-0.331432372357;IRF7:-0.336550961228;MZF1:-0.340338007741;ZBTB16:-0.350202292921;LMO2:-0.36018420814;NKX6-1,2:-0.361151128591;TLX2:-0.369320231508;ESRRA:-0.381524440539;SPIB:-0.387669046676;ALX1:-0.407558619729;RORA:-0.412628412599;TFAP2B:-0.415696159877;VSX1,2:-0.416725178736;TGIF1:-0.431795588153;NR1H4:-0.432075779113;FOXP3:-0.434189227777;PAX3,7:-0.45367264571;CUX2:-0.472340184325;TFAP2{A,C}:-0.483662600956;FOXO1,3,4:-0.49979628599;DMAP1_NCOR{1,2}_SMARC:-0.509816695393;IRF1,2:-0.54271335593;RBPJ:-0.543375339493;PAX2:-0.54354574496;POU6F1:-0.563723547041;BREu{core}:-0.569339376412;CREB1:-0.584751309828;FOX{D1,D2}:-0.615514558668;ESR1:-0.617458850345;EGR1..3:-0.625648626054;MYFfamily:-0.627883075335;ATF4:-0.634558933057;ATF5_CREB3:-0.638550264723;ZFP161:-0.645444909261;ATF2:-0.649536483571;SNAI1..3:-0.650046924132;MED-1{core}:-0.670515297387;FOX{F1,F2,J1}:-0.695846214918;PDX1:-0.717089660124;RREB1:-0.7203772806;FOXP1:-0.726912378465;ZEB1:-0.756269766015;FOXN1:-0.777895637429;HOX{A6,A7,B6,B7}:-0.782714699133;PITX1..3:-0.783148039995;MYOD1:-0.822107061345;SREBF1,2:-0.98616822752;RFX2..5_RFXANK_RFXAP:-1.12856063441
|top_motifs=POU3F1..4:1.4953447516;NKX2-2,8:1.36135383965;HSF1,2:1.35420057609;HOX{A5,B5}:1.18518998145;HMGA1,2:1.1754778892;EN1,2:1.15267096237;CDC5L:1.11135118421;NR3C1:1.10984865588;IKZF1:1.1085723244;FOX{I1,J2}:1.09389580666;NKX3-1:0.952840031487;SRF:0.938149443661;FOXD3:0.895550531795;MYBL2:0.849630879371;TAL1_TCF{3,4,12}:0.823250191423;TLX1..3_NFIC{dimer}:0.800409970768;AIRE:0.792194498941;ONECUT1,2:0.779798127046;UFEwm:0.726921268026;NFATC1..3:0.720051774982;E2F1..5:0.694415140679;LHX3,4:0.66661545036;PAX8:0.65081213814;TFAP4:0.646959829766;FOXL1:0.633929104854;TBP:0.631185308441;XCPE1{core}:0.616360224831;ZNF384:0.614242268108;TEAD1:0.614203739396;GLI1..3:0.601007466435;HIF1A:0.577348025462;GCM1,2:0.575484534329;GTF2A1,2:0.572991895288;PAX5:0.558012818844;ADNP_IRX_SIX_ZHX:0.557634237873;NKX2-1,4:0.552829294291;EVI1:0.551076403733;ARID5B:0.547672695675;MYB:0.539069455744;HBP1_HMGB_SSRP1_UBTF:0.490664239488;LEF1_TCF7_TCF7L1,2:0.488890433593;SOX{8,9,10}:0.468269206662;HES1:0.421349573214;TFDP1:0.398396977164;TEF:0.398092178799;TP53:0.397904970245;ZIC1..3:0.388916921468;RXR{A,B,G}:0.387313879411;AR:0.385119898535;POU5F1:0.382448018208;SMAD1..7,9:0.378007786891;PAX6:0.375173041619;CRX:0.36704920154;NR6A1:0.365702483394;GFI1B:0.356560370791;ALX4:0.33098705153;bHLH_family:0.323525632929;SOX2:0.316712465311;ZNF148:0.312594690904;ZNF423:0.311097808836;GFI1:0.30778182159;NKX3-2:0.307675180492;T:0.288427495716;STAT5{A,B}:0.282175485976;TBX4,5:0.275585578831;XBP1:0.268448034899;POU1F1:0.263586616545;NFY{A,B,C}:0.256840229756;KLF4:0.249636418028;ZNF143:0.225655178017;NFIX:0.205808507159;EBF1:0.195943893151;NR5A1,2:0.190864295323;FOXQ1:0.185265405094;GATA6:0.1690760016;ELF1,2,4:0.166991215303;HOX{A4,D4}:0.163732787834;ELK1,4_GABP{A,B1}:0.156572014566;HAND1,2:0.154335517786;ZNF238:0.151830761108;CDX1,2,4:0.148016333529;NFE2L2:0.141643745075;SOX17:0.134086679927;BACH2:0.13403060491;SOX5:0.119127612092;RXRA_VDR{dimer}:0.1022064499;NFE2L1:0.101545270987;HOXA9_MEIS1:0.0864338078287;MAFB:0.0826994850765;PBX1:0.0592424694576;STAT2,4,6:0.0558394245905;FOS_FOS{B,L1}_JUN{B,D}:0.054202352723;MEF2{A,B,C,D}:0.0480466798809;GTF2I:0.0375029037042;MAZ:0.0213715400215;NFIL3:0.0117221560489;PPARG:0.0112724319047;HLF:0.00983322845724;GATA4:-0.0138593765628;IKZF2:-0.0257038274867;NHLH1,2:-0.0361384539569;HNF1A:-0.0456910535933;PRRX1,2:-0.0497799465939;FOSL2:-0.0531391866545;ATF6:-0.0586382347659;REST:-0.0634461365045;GZF1:-0.0825085452291;NFE2:-0.0858986272882;BPTF:-0.0922790822504;NRF1:-0.108548938007;JUN:-0.113451799663;HNF4A_NR2F1,2:-0.115782265657;DBP:-0.130430793985;ZBTB6:-0.142530532695;PRDM1:-0.165046346817;OCT4_SOX2{dimer}:-0.175912443571;YY1:-0.176330067981;CEBPA,B_DDIT3:-0.179444992614;NKX2-3_NKX2-5:-0.186104032197;PAX4:-0.187193464985;PAX1,9:-0.19200914308;ETS1,2:-0.195076429803;MTE{core}:-0.198552637708;FOXM1:-0.205586773921;TFCP2:-0.209203941685;RFX1:-0.21245689452;AHR_ARNT_ARNT2:-0.226580473571;RUNX1..3:-0.230902473496;TOPORS:-0.231396518772;NANOG{mouse}:-0.233420609808;HIC1:-0.237750845383;PATZ1:-0.243975612981;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.246174711843;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.25957872844;NANOG:-0.261403681504;NFKB1_REL_RELA:-0.263448993625;SPZ1:-0.270059345015;FOXA2:-0.272574654745;EP300:-0.282895975931;MTF1:-0.303081927683;POU2F1..3:-0.305107199245;SP1:-0.312837203176;HMX1:-0.316222761475;STAT1,3:-0.322283770638;SPI1:-0.331432372357;IRF7:-0.336550961228;MZF1:-0.340338007741;ZBTB16:-0.350202292921;LMO2:-0.36018420814;NKX6-1,2:-0.361151128591;TLX2:-0.369320231508;ESRRA:-0.381524440539;SPIB:-0.387669046676;ALX1:-0.407558619729;RORA:-0.412628412599;TFAP2B:-0.415696159877;VSX1,2:-0.416725178736;TGIF1:-0.431795588153;NR1H4:-0.432075779113;FOXP3:-0.434189227777;PAX3,7:-0.45367264571;CUX2:-0.472340184325;TFAP2{A,C}:-0.483662600956;FOXO1,3,4:-0.49979628599;DMAP1_NCOR{1,2}_SMARC:-0.509816695393;IRF1,2:-0.54271335593;RBPJ:-0.543375339493;PAX2:-0.54354574496;POU6F1:-0.563723547041;BREu{core}:-0.569339376412;CREB1:-0.584751309828;FOX{D1,D2}:-0.615514558668;ESR1:-0.617458850345;EGR1..3:-0.625648626054;MYFfamily:-0.627883075335;ATF4:-0.634558933057;ATF5_CREB3:-0.638550264723;ZFP161:-0.645444909261;ATF2:-0.649536483571;SNAI1..3:-0.650046924132;MED-1{core}:-0.670515297387;FOX{F1,F2,J1}:-0.695846214918;PDX1:-0.717089660124;RREB1:-0.7203772806;FOXP1:-0.726912378465;ZEB1:-0.756269766015;FOXN1:-0.777895637429;HOX{A6,A7,B6,B7}:-0.782714699133;PITX1..3:-0.783148039995;MYOD1:-0.822107061345;SREBF1,2:-0.98616822752;RFX2..5_RFXANK_RFXAP:-1.12856063441
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11250-116E8;search_select_hide=table117:FF:11250-116E8
}}
}}

Latest revision as of 16:28, 3 June 2020

Name:Fibroblast - Pulmonary Artery, donor1
Species:Human (Homo sapiens)
Library ID:CNhs10878
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuepulmonary artery
dev stageNA
sexunknown
ageNA
cell typefibroblast
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberlot:2546
catalog numberSC3125
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005559
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10878 CAGE DRX008280 DRR009152
Accession ID Hg19

Library idBAMCTSS
CNhs10878 DRZ000577 DRZ001962
Accession ID Hg38

Library idBAMCTSS
CNhs10878 DRZ011927 DRZ013312
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005559
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10008.ACAGTG sRNA-Seq DRX037111 DRR041477
Accession ID Hg19

Library idBAMCTSS
SRhi10008.ACAGTG DRZ007119


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.129
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.368
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.21
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.393
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0451
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.255
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.457
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0467
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0888
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0509
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0759
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.445
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-8.83136e-4
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0298
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.00756
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.302
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0962
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.28
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.254
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.195
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.911
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.394
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.548
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10878

Jaspar motifP-value
MA0002.20.144
MA0003.10.755
MA0004.10.256
MA0006.10.184
MA0007.10.0247
MA0009.10.605
MA0014.10.714
MA0017.10.78
MA0018.21.10077e-4
MA0019.10.374
MA0024.10.00503
MA0025.10.168
MA0027.10.999
MA0028.10.14
MA0029.10.652
MA0030.10.0308
MA0031.10.141
MA0035.20.464
MA0038.10.623
MA0039.20.773
MA0040.10.792
MA0041.10.563
MA0042.10.783
MA0043.14.16756e-4
MA0046.10.0797
MA0047.20.713
MA0048.10.0384
MA0050.13.93189e-5
MA0051.10.0437
MA0052.10.0455
MA0055.10.00178
MA0057.10.347
MA0058.10.077
MA0059.10.188
MA0060.10.223
MA0061.10.404
MA0062.20.146
MA0065.20.963
MA0066.10.39
MA0067.10.0095
MA0068.10.508
MA0069.10.706
MA0070.10.791
MA0071.10.907
MA0072.10.498
MA0073.10.718
MA0074.10.963
MA0076.10.86
MA0077.10.348
MA0078.10.478
MA0079.20.139
MA0080.25.63426e-6
MA0081.10.211
MA0083.10.00136
MA0084.10.0162
MA0087.10.449
MA0088.10.101
MA0090.19.00202e-4
MA0091.10.284
MA0092.10.0929
MA0093.10.223
MA0099.20.0734
MA0100.10.322
MA0101.10.179
MA0102.20.0183
MA0103.16.52831e-4
MA0104.20.618
MA0105.10.529
MA0106.10.189
MA0107.10.0942
MA0108.20.00179
MA0111.10.677
MA0112.20.0137
MA0113.10.0286
MA0114.10.374
MA0115.10.0983
MA0116.10.0509
MA0117.10.662
MA0119.10.0056
MA0122.10.924
MA0124.10.896
MA0125.10.81
MA0131.10.827
MA0135.10.027
MA0136.15.39846e-4
MA0137.20.837
MA0138.20.583
MA0139.10.771
MA0140.10.0464
MA0141.10.795
MA0142.10.868
MA0143.10.439
MA0144.10.418
MA0145.10.375
MA0146.10.755
MA0147.10.973
MA0148.10.608
MA0149.10.767
MA0150.10.707
MA0152.10.0141
MA0153.10.186
MA0154.10.462
MA0155.10.579
MA0156.10.105
MA0157.10.547
MA0159.10.39
MA0160.10.13
MA0162.10.0209
MA0163.10.0291
MA0164.10.559
MA0258.10.498
MA0259.10.36



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10878

Novel motifP-value
10.234
100.521
1000.262
1010.499
1020.4
1030.113
1040.453
1050.494
1060.123
1070.0304
1080.819
1090.0541
110.299
1100.107
1110.147
1120.857
1130.124
1140.774
1150.446
1160.0902
1170.965
1180.774
1190.994
120.195
1200.178
1210.387
1220.558
1234.18901e-4
1240.412
1250.456
1260.749
1270.923
1280.78
1290.895
130.024
1300.048
1310.919
1320.619
1330.503
1340.305
1350.792
1360.199
1370.195
1380.246
1390.16
140.169
1400.983
1410.884
1420.421
1430.126
1440.516
1450.678
1460.347
1470.167
1480.181
1490.231
150.55
1500.0812
1510.952
1520.0702
1530.477
1540.435
1550.0543
1560.717
1570.0909
1580.00656
1590.154
160.0764
1600.0273
1610.922
1620.77
1630.596
1640.533
1650.825
1660.449
1670.728
1680.482
1690.098
170.476
180.502
190.0513
20.699
200.898
210.269
220.75
230.736
240.0738
250.705
260.207
270.931
280.122
290.263
30.306
300.836
310.864
321.52994e-5
330.0579
340.866
350.291
360.552
370.0762
380.9
390.0716
40.822
400.47
410.67
420.378
430.886
440.165
450.683
460.185
470.432
480.214
490.749
50.472
500.656
510.926
520.77
530.135
540.654
550.684
560.825
570.535
580.22
590.378
60.6
600.668
610.9
620.63
630.222
640.593
650.954
660.182
670.504
680.675
690.35
70.697
700.596
710.137
720.5
730.00837
740.486
750.486
760.413
770.154
780.629
790.0878
80.0158
800.68
810.986
820.661
830.247
840.495
850.963
860.754
870.0122
880.62
890.24
90.855
900.808
910.716
920.991
930.777
940.715
950.0193
960.718
970.544
980.0929
990.00161



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10878


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002557 (fibroblast of pulmonary artery)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001637 (artery)
0000483 (epithelium)
0002384 (connective tissue)
0000479 (tissue)
0000055 (vessel)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0010313 (neural crest-derived structure)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0010371 (ecto-epithelium)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0000078 (mixed ectoderm/mesoderm/endoderm-derived structure)
0002049 (vasculature)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0002012 (pulmonary artery)
0004535 (cardiovascular system)
0004572 (arterial system)
0004537 (blood vasculature)
0008886 (pulmonary vascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000001 (sample)
0000068 (human fibroblast of pulmonary artery sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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