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(Created page with "{{f5samples |id=FF:11310-117C5 |name=Endothelial Progenitor Cells, donor2 |sample_id=11310 |rna_tube_id=117C5 |rna_box=117 |rna_position=C5 |sample_cell_lot=N/A |sampl...")
 
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{{f5samples
{{f5samples
|id=FF:11310-117C5
|DRA_sample_Accession=CAGE@SAMD00004810
|name=Endothelial Progenitor Cells, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004810
|sample_id=11310
|accession_numbers=CAGE;DRX008130;DRR009002;DRZ000427;DRZ001812;DRZ011777;DRZ013162
|rna_tube_id=117C5
|accession_numbers_RNASeq=sRNA-Seq;DRX037137;DRR041503;DRZ007145
|rna_box=117
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_position=C5
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000763,CL:0002320,CL:0000066,CL:0002371,CL:0000213,CL:0000766,CL:0002078,CL:0000219,CL:0000215,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000034,CL:0000576,CL:0000115,CL:0000566,CL:0002619
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=3HBiomedical
|rna_lot_number=EPC723
|rna_catalog_number=3H100-81-10
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=57 years old adult
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=57
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=blood vessel endothelial progenitor cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10.00000
|rna_concentration=0.23900
|sample_note=
|profile_hcage=CNhs11897,LSID834,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10009,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000066,CL:0000115,CL:0000134,CL:0000144,CL:0000213,CL:0000215,CL:0000219,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0002078,CL:0002320,CL:0002321,CL:0002371,CL:0002619
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000248
 
|comment=Previously Endothelial Progenitor Cells, donor2
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.46!284.38!SPI1;;chr16:85932760..85932775,+!p1@IRF8!2.27!185.91!IRF8;;chr2:68592406..68592424,+!p1@PLEK!2.27!185.59!PLEK;;chr7:115670804..115670825,-!p1@TFEC!2.14!137.01!TFEC;;chr12:54778471..54778528,-!p1@ZNF385A!2.09!123.08!ZNF385A;;chr20:39317868..39317884,-!p1@MAFB!1.91!903.66!MAFB;;chr11:47400062..47400077,-!p2@SPI1!1.81!63.16!SPI1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.80!61.54!ZBED1;;chr10:31288398..31288455,-!p2@ZNF438!1.76!64.78!ZNF438;;chr16:79634624..79634642,-!p1@MAF!1.64!159.68!MAF;;chr10:51572408..51572454,+!p3@NCOA4!1.61!223.49!NCOA4;;chr14:75988771..75988826,+!p1@BATF!1.47!37.25!BATF;;chr7:137620650..137620677,-!p3@CREB3L2!1.47!28.83!CREB3L2;;chr2:145277640..145277771,-!p1@ZEB2!1.46!355.64!ZEB2;;chr2:145277882..145277967,-!p3@ZEB2!1.46!47.29!ZEB2;;chr12:26277956..26277980,-!p1@BHLHE41!1.42!88.75!BHLHE41;;chr2:122042770..122042785,-!p1@TFCP2L1!1.39!23.32!TFCP2L1;;chr7:128577972..128578047,+!p1@IRF5!1.38!36.28!IRF5;;chr7:50344289..50344323,+!p1@IKZF1!1.38!23.00!IKZF1;;chr16:79634595..79634620,-!p2@MAF!1.37!40.49!MAF;;chr16:67198683..67198698,+!p2@HSF4!1.36!21.70!HSF4;;chr1:78050720..78050734,-!p9@ZZZ3!1.34!20.73!ZZZ3;;chr19:33793430..33793447,-!p1@CEBPA!1.33!83.89!CEBPA;;chr7:50343634..50343717,+!p2@IKZF1!1.33!20.41!IKZF1;;chr11:47279504..47279563,+!p1@NR1H3!1.32!44.37!NR1H3;;chr7:137620684..137620711,-!p4@CREB3L2!1.24!16.19!CREB3L2;;chr3:69788576..69788648,+!p1@MITF!1.23!84.54!MITF;;chr2:192015701..192015743,-!p1@STAT4!1.18!19.43!STAT4;;chr12:26277817..26277863,-!p2@BHLHE41!1.17!18.46!BHLHE41;;chr10:31288370..31288393,-!p3@ZNF438!1.17!13.93!ZNF438;;chr12:12764995..12765017,+!p3@CREBL2!1.16!19.11!CREBL2;;chr2:231090433..231090469,+!p1@SP140!1.16!13.60!SP140;;chr12:26277929..26277955,-!p3@BHLHE41!1.14!18.14!BHLHE41;;chr16:79633894..79633954,-!p3@MAF!1.13!23.97!MAF;;chr3:63953435..63953499,+!p1@ATXN7!1.13!12.63!ATXN7;;chr2:113999360..113999386,-!p4@PAX8!1.10!11.66!PAX8;;chr9:117150254..117150271,-!p1@AKNA!1.09!31.09!AKNA;;chr16:67198633..67198671,+!p1@HSF4!1.09!11.34!HSF4;;chr17:45810594..45810608,+!p1@TBX21!1.09!11.34!TBX21;;chr6:391743..391759,+!p1@IRF4!1.06!10.36!IRF4;;chr11:47399996..47400014,-!p4@SPI1!1.06!10.36!SPI1;;chr11:128563948..128564003,+!p1@FLI1!1.05!123.73!FLI1;;chr13:41593425..41593480,-!p1@ELF1!1.03!63.16!ELF1;;chr10:51572339..51572376,+!p4@NCOA4!1.02!21.70!NCOA4;;chr17:40440481..40440550,+!p1@STAT5A!1.01!67.37!STAT5A;;chr20:50159198..50159299,-!p1@NFATC2!1.01!13.60!NFATC2;;chr7:50344251..50344288,+!p3@IKZF1!1.00!9.07!IKZF1;;chr1:25256756..25256774,-!p1@RUNX3!0.99!16.84!RUNX3;;chr2:68592394..68592405,+!p2@PLEK!0.99!8.75!PLEK;;chr11:47400045..47400060,-!p6@SPI1!0.99!8.75!SPI1;;chr12:101869096..101869118,+!p1@SPIC!0.99!8.75!SPIC;;chr3:27763807..27763822,-!p1@EOMES!0.97!8.42!EOMES;;chr4:26165074..26165110,+!p9@RBPJ!0.97!8.42!RBPJ;;chr9:88969303..88969335,-!p1@ZCCHC6!0.96!77.41!ZCCHC6;;chr12:12764947..12764986,+!p2@CREBL2!0.96!16.19!CREBL2;;chr5:133451294..133451310,+!p2@TCF7!0.96!8.10!TCF7;;chr8:116681194..116681214,-!p1@TRPS1!0.95!76.76!TRPS1;;chr19:13213704..13213726,-!p3@LYL1!0.95!10.69!LYL1;;chr3:71179699..71179744,-!p2@FOXP1!0.94!59.92!FOXP1;;chr16:79634581..79634592,-!p4@MAF!0.94!7.77!MAF;;chr19:13213954..13214021,-!p4@LYL1!0.93!7.45!LYL1;;chrX:106960285..106960299,-!p1@TSC22D3!0.91!199.19!TSC22D3;;chr11:47400032..47400043,-!p5@SPI1!0.91!7.13!SPI1;;chr4:185395633..185395651,-!p2@IRF2!0.90!11.34!IRF2;;chr19:13213662..13213686,-!p1@LYL1!0.90!10.36!LYL1;;chr2:192015750..192015793,-!p2@STAT4!0.90!9.39!STAT4;;chrX:107018836..107018862,-!p8@TSC22D3!0.89!6.80!TSC22D3;;chr1:167298300..167298319,+!p2@POU2F1!0.89!6.80!POU2F1;;chr1:158979686..158979745,+!p1@IFI16!0.87!222.51!IFI16;;chr17:37934365..37934387,-!p2@IKZF3!0.87!6.48!IKZF3;;chr2:145275982..145276003,-!p7@ZEB2!0.87!6.48!ZEB2;;chr11:47399947..47399961,-!p3@SPI1!0.87!6.48!SPI1;;chr5:88178983..88179012,-!p1@MEF2C!0.86!51.82!MEF2C;;chr6:144385698..144385742,-!p2@PLAGL1!0.86!7.77!PLAGL1;;chrX:101186981..101187030,-!p1@ZMAT1!0.85!20.73!ZMAT1;;chr20:3321190..3321215,-!p7@C20orf194!0.85!6.15!C20orf194;;chr2:231090471..231090504,+!p2@SP140!0.85!6.15!SP140;;chr3:18486354..18486377,-!p2@SATB1!0.82!7.13!SATB1;;chr4:109087445..109087463,-!p1@LEF1!0.81!5.51!LEF1;;chr19:16435735..16435773,+!p4@KLF2!0.81!5.51!KLF2;;chr21:30672433..30672464,+!p6@BACH1!0.81!5.51!BACH1;;chr2:70142232..70142251,+!p1@MXD1!0.80!32.71!MXD1;;chr3:48282587..48282603,+!p1@ZNF589!0.80!25.59!ZNF589;;chr11:113930291..113930339,+!p2@ZBTB16!0.80!9.07!ZBTB16;;chr5:88179195..88179224,-!p3@MEF2C!0.80!8.75!MEF2C;;chr4:185395590..185395627,-!p3@IRF2!0.80!6.80!IRF2;;chr2:178128149..178128198,-!p2@NFE2L2!0.79!30.12!NFE2L2;;chr10:94449703..94449718,+!p1@HHEX!0.79!21.38!HHEX;;chr8:116681221..116681236,-!p3@TRPS1!0.79!16.52!TRPS1;;chr6:106546808..106546833,+!p3@PRDM1!0.78!6.48!PRDM1;;chr10:64576105..64576133,-!p1@EGR2!0.77!10.69!EGR2;;chr1:221053049..221053075,+!p3@HLX!0.76!8.75!HLX;;chr18:52989031..52989079,-!p2@TCF4!0.75!11.66!TCF4;;chr4:87857433..87857472,+!p9@AFF1!0.75!8.75!AFF1;;chr3:114866084..114866118,-!p2@ZBTB20!0.74!17.81!ZBTB20;;chr16:3313791..3313834,+!p2@ZNF263!0.74!10.69!ZNF263;;chr14:75988831..75988847,+!p2@BATF!0.74!4.53!BATF;;chr2:113999397..113999413,-!p17@PAX8!0.74!4.53!PAX8;;chr11:111249993..111250006,-!p1@POU2AF1!0.74!4.53!POU2AF1;;chr7:115670792..115670797,-!p2@TFEC!0.74!4.53!TFEC;;chr14:68283291..68283323,-!p1@ZFYVE26!0.73!80.33!ZFYVE26;;chr12:54785074..54785122,-!p2@ZNF385A!0.73!7.13!ZNF385A;;chr16:88752889..88752921,-!p1@SNAI3!0.73!5.18!SNAI3;;chr20:3388238..3388323,-!p1@C20orf194!0.72!33.36!C20orf194;;chr20:56195474..56195506,-!p1@ZBP1!0.72!4.21!ZBP1;;chr16:79634464..79634493,-!p5@MAF!0.72!4.21!MAF;;chr6:41691289..41691312,-!p9@TFEB!0.72!4.21!TFEB;;chr19:35759824..35759891,+!p1@USF2!0.71!145.10!USF2;;chr4:106068026..106068084,+!p1@TET2!0.71!42.11!TET2;;chr9:88969339..88969422,-!p2@ZCCHC6!0.71!35.95!ZCCHC6;;chr2:178128199..178128245,-!p3@NFE2L2!0.71!24.62!NFE2L2;;chr16:68118689..68118733,+!p3@NFATC3!0.71!11.34!NFATC3;;chr19:38085768..38085821,+!p1@ZNF540!0.71!6.48!ZNF540;;chr9:88969287..88969297,-!p3@ZCCHC6!0.71!5.83!ZCCHC6;;chrX:107019163..107019179,-!p7@TSC22D3!0.71!4.86!TSC22D3;;chr2:48541789..48541874,+!p1@FOXN2!0.70!102.35!FOXN2;;chr5:133450365..133450444,+!p1@TCF7!0.70!20.73!TCF7;;chr4:87857474..87857489,+!p7@AFF1!0.70!7.45!AFF1;;chr1:158985493..158985535,+!p4@IFI16!0.70!6.48!IFI16;;chr19:50432132..50432217,+!p2@ATF5!0.70!4.86!ATF5;;chr16:31885093..31885165,+!p1@ZNF267!0.69!67.69!ZNF267;;chr7:50343895..50343936,+!p5@IKZF1!0.69!3.89!IKZF1;;chr5:88179017..88179046,-!p2@MEF2C!0.68!17.17!MEF2C;;chr6:106534192..106534224,+!p1@PRDM1!0.68!11.98!PRDM1;;chr4:87856191..87856208,+!p2@AFF1!0.66!33.04!AFF1;;chr2:61108695..61108753,+!p1@REL!0.66!28.50!REL;;chr6:15246200..15246214,+!p2@JARID2!0.66!11.01!JARID2;;chr2:113994526..113994556,-!p3@PAX8!0.66!3.56!PAX8;;chr2:145277589..145277612,-!p12@ZEB2!0.66!3.56!ZEB2;;chr3:71542615..71542644,-!p12@FOXP1!0.66!3.56!FOXP1;;chr4:57522674..57522699,-!p5@HOPX!0.66!3.56!HOPX;;chr7:150974206..150974255,-!p1@SMARCD3!0.65!25.26!SMARCD3;;chr8:116681150..116681164,-!p5@TRPS1!0.65!7.45!TRPS1;;chr6:15246261..15246312,+!p1@JARID2!0.64!96.84!JARID2;;chr19:57183114..57183145,-!p1@ZNF835!0.64!3.89!ZNF835;;chr21:30671235..30671253,+!p1@BACH1!0.63!49.56!BACH1;;chr15:60884706..60884743,-!p1@RORA!0.63!19.76!RORA;;chr16:68119324..68119364,+!p1@NFATC3!0.63!17.17!NFATC3;;chr5:321810..321877,+!p1@AHRR!0.63!11.98!AHRR;;chr8:116680215..116680245,-!p6@TRPS1!0.63!5.51!TRPS1;;chr6:152011654..152011682,+!p1@ESR1!0.63!3.24!ESR1;;chr17:38020392..38020477,-!p1@IKZF3!0.63!3.24!IKZF3;;chr12:54778351..54778378,-!p6@ZNF385A!0.63!3.24!ZNF385A;;chr2:145277792..145277808,-!p15@ZEB2!0.63!3.24!ZEB2;;chr2:145277833..145277845,-!p16@ZEB2!0.63!3.24!ZEB2;;chr8:48650715..48650735,-!p1@CEBPD!0.62!484.54!CEBPD;;chr2:97202480..97202499,+!p1@ARID5A!0.62!38.22!ARID5A;;chr21:30671211..30671234,+!p3@BACH1!0.62!18.14!BACH1;;chr5:88179230..88179270,-!p4@MEF2C!0.62!6.80!MEF2C;;chr19:49140609..49140643,-!p1@DBP!0.61!20.41!DBP;;chr12:53774567..53774658,+!p2@SP1!0.61!17.81!SP1;;chr19:54041382..54041437,+!p3@ZNF331!0.61!10.04!ZNF331;;chr7:149470641..149470694,-!p1@ZNF467!0.60!15.87!ZNF467;;chr19:12405606..12405629,-!p2@ZNF44!0.60!6.48!ZNF44;;chr5:142782823..142782854,-!p3@NR3C1!0.60!4.53!NR3C1;;chr14:90085458..90085557,-!p1@FOXN3!0.59!36.92!FOXN3;;chr18:77160282..77160343,+!p2@NFATC1!0.59!21.38!NFATC1;;chrX:131623044..131623089,-!p1@MBNL3!0.59!14.25!MBNL3;;chr8:60031619..60031676,-!p1@TOX!0.59!7.13!TOX;;chr18:3449527..3449582,+!p6@TGIF1!0.59!6.15!TGIF1;;chr15:90544182..90544195,+!p7@ZNF710!0.59!2.92!ZNF710;;chr16:88752861..88752884,-!p2@SNAI3!0.59!2.92!SNAI3;;chr17:37934204..37934241,-!p3@IKZF3!0.59!2.92!IKZF3;;chr5:133451347..133451358,+!p3@TCF7!0.59!2.92!TCF7;;chr7:50348268..50348366,+!p4@IKZF1!0.59!2.92!IKZF1;;chrX:49121165..49121179,-!p1@FOXP3!0.59!2.92!FOXP3;;chrX:129244430..129244442,-!p5@ELF4!0.59!2.92!ELF4;;chr19:50922187..50922204,+!p1@SPIB!0.59!2.92!SPIB;;chr2:145277575..145277580,-!p22@ZEB2!0.59!2.92!ZEB2;;chr4:185395672..185395710,-!p1@IRF2!0.58!92.96!IRF2;;chr8:71316428..71316459,-!p2@NCOA2!0.58!5.18!NCOA2;;chr7:149470540..149470596,-!p2@ZNF467!0.58!3.89!ZNF467;;chr4:87856129..87856186,+!p1@AFF1!0.57!46.64!AFF1;;chr8:123793860..123793921,+!p2@ZHX2!0.57!8.75!ZHX2;;chr1:221052776..221052799,+!p1@HLX!0.57!5.51!HLX;;chr2:145282041..145282092,-!p8@ZEB2!0.57!4.53!ZEB2;;chr11:113930425..113930471,+!p1@ZBTB16!0.57!4.21!ZBTB16;;chr1:44679370..44679422,+!p3@DMAP1!0.57!3.89!DMAP1;;chr18:6414884..6414942,-!p1@L3MBTL4!0.57!3.56!L3MBTL4;;chr4:57522166..57522260,-!p2@HOPX!0.57!3.24!HOPX;;chr14:64970670..64970712,-!p3@ZBTB25!0.56!6.48!ZBTB25;;chr8:116681247..116681261,-!p8@TRPS1!0.56!3.56!TRPS1;;chr6:106546786..106546802,+!p6@PRDM1!0.56!2.59!PRDM1;;chr8:53373491..53373506,-!p4@ST18!0.56!2.59!ST18;;chr3:18487057..18487105,-!p4@SATB1!0.56!2.59!SATB1;;chr1:167298233..167298248,+!p6@POU2F1!0.56!2.59!POU2F1;;chr1:25256439..2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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002619;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0000222
|fonse_cell_line=
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|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor2.CNhs11897.11310-117C5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor2.CNhs11897.11310-117C5.hg19.nobarcode.rdna.fa.gz
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|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor2.CNhs11897.11310-117C5.hg38.nobarcode.ctss.bed.gz
|id=FF:11310-117C5
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|is_obsolete=
|library_id=CNhs11897
|library_id_phase_based=2:CNhs11897
|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11310
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.AGTCAA.11310
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11310
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.AGTCAA.11310
|name=CD14+ monocyte derived endothelial progenitor cells, donor2
|namespace=FANTOM5
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|rna_box=117
|rna_catalog_number=3H100-81-10
|rna_concentration=0.239
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=EPC723
|rna_od260/230=
|rna_od260/280=
|rna_position=C5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=117C5
|rna_weight_ug=10
|rnaseq_library_id=SRhi10009.AGTCAA
|sample_age=57
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=blood vessel endothelial progenitor cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=3HBiomedical
|sample_description=
|sample_dev_stage=57 years old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.67045094819553e-242!GO:0005737;cytoplasm;1.13224010210225e-148!GO:0043227;membrane-bound organelle;1.43971376878977e-147!GO:0043231;intracellular membrane-bound organelle;2.93855826568952e-147!GO:0043226;organelle;1.69678699560872e-129!GO:0043229;intracellular organelle;6.27500708154691e-129!GO:0044444;cytoplasmic part;4.42364099660513e-114!GO:0044422;organelle part;3.71424120301344e-94!GO:0044446;intracellular organelle part;1.71231927785091e-92!GO:0044237;cellular metabolic process;8.56617204974581e-74!GO:0044238;primary metabolic process;1.3390823919094e-71!GO:0032991;macromolecular complex;2.26772179334208e-66!GO:0043170;macromolecule metabolic process;4.86400328393289e-65!GO:0003723;RNA binding;9.09730581411006e-54!GO:0044428;nuclear part;1.02752826275949e-52!GO:0030529;ribonucleoprotein complex;1.05718318910118e-51!GO:0043233;organelle lumen;1.73415478042062e-51!GO:0031974;membrane-enclosed lumen;1.73415478042062e-51!GO:0005515;protein binding;4.03682925676872e-51!GO:0005739;mitochondrion;3.87755119659472e-50!GO:0031090;organelle membrane;8.28374118215593e-49!GO:0033036;macromolecule localization;8.21375855069388e-48!GO:0015031;protein transport;5.19168886063078e-47!GO:0019538;protein metabolic process;1.27732185103584e-46!GO:0005634;nucleus;1.95642182456559e-46!GO:0045184;establishment of protein localization;7.93528751154974e-46!GO:0008104;protein localization;1.7663750345732e-44!GO:0044260;cellular macromolecule metabolic process;1.93311007422946e-42!GO:0044267;cellular protein metabolic process;9.68371193432438e-42!GO:0044429;mitochondrial part;1.50085373591791e-36!GO:0006412;translation;2.00586729938171e-36!GO:0043234;protein complex;4.77418324479913e-35!GO:0031967;organelle envelope;9.3746165495413e-35!GO:0031975;envelope;2.07408853181579e-34!GO:0006396;RNA processing;4.69722236303654e-34!GO:0043283;biopolymer metabolic process;7.122852783034e-33!GO:0016071;mRNA metabolic process;2.98284668818775e-32!GO:0031981;nuclear lumen;6.39057690395825e-32!GO:0046907;intracellular transport;1.5675001309771e-31!GO:0009058;biosynthetic process;2.22283606808466e-31!GO:0009059;macromolecule biosynthetic process;2.79015452961581e-30!GO:0006886;intracellular protein transport;2.97247179766192e-30!GO:0005829;cytosol;3.38724068798384e-30!GO:0008380;RNA splicing;3.2098619984563e-28!GO:0005840;ribosome;1.74540424890403e-27!GO:0044249;cellular biosynthetic process;4.07505540663449e-27!GO:0006397;mRNA processing;6.07300796163995e-27!GO:0010467;gene expression;1.10161394789058e-26!GO:0016043;cellular component organization and biogenesis;7.01898547917355e-26!GO:0005740;mitochondrial envelope;3.6800597939668e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.33477296130019e-24!GO:0051649;establishment of cellular localization;3.54487057616414e-24!GO:0065003;macromolecular complex assembly;5.52453941623783e-24!GO:0031966;mitochondrial membrane;5.72240279127698e-24!GO:0051641;cellular localization;5.80760485810768e-24!GO:0003735;structural constituent of ribosome;3.24794527252052e-23!GO:0005773;vacuole;3.41165070396382e-23!GO:0019866;organelle inner membrane;6.93015055012597e-23!GO:0006119;oxidative phosphorylation;1.01748781101179e-22!GO:0005654;nucleoplasm;5.79697427680818e-22!GO:0033279;ribosomal subunit;1.28948792011043e-21!GO:0000323;lytic vacuole;1.31701093944045e-21!GO:0005764;lysosome;1.31701093944045e-21!GO:0005743;mitochondrial inner membrane;4.02734955172334e-21!GO:0005681;spliceosome;1.09115480984473e-20!GO:0022607;cellular component assembly;3.24632388553988e-20!GO:0044265;cellular macromolecule catabolic process;1.29369772159485e-19!GO:0048770;pigment granule;4.14277333267909e-19!GO:0042470;melanosome;4.14277333267909e-19!GO:0006915;apoptosis;6.85654439335684e-19!GO:0012501;programmed cell death;8.41550250461628e-19!GO:0044248;cellular catabolic process;2.8912339743524e-18!GO:0012505;endomembrane system;3.86242825664266e-18!GO:0006512;ubiquitin cycle;4.799004158141e-18!GO:0016192;vesicle-mediated transport;5.89772057746632e-18!GO:0008219;cell death;6.90836154613709e-18!GO:0016265;death;6.90836154613709e-18!GO:0043285;biopolymer catabolic process;8.73496814492491e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.10317070174129e-17!GO:0044451;nucleoplasm part;2.31412446900435e-17!GO:0000166;nucleotide binding;3.47880737029057e-17!GO:0051186;cofactor metabolic process;8.82765130051938e-17!GO:0009057;macromolecule catabolic process;1.62030056994364e-16!GO:0044455;mitochondrial membrane part;2.48908749775482e-16!GO:0016874;ligase activity;3.96208971191506e-16!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.01607360986794e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;4.80127588050131e-16!GO:0044257;cellular protein catabolic process;6.27549185572369e-16!GO:0019941;modification-dependent protein catabolic process;8.91129597607426e-16!GO:0043632;modification-dependent macromolecule catabolic process;8.91129597607426e-16!GO:0006511;ubiquitin-dependent protein catabolic process;9.70589914315566e-16!GO:0006605;protein targeting;1.87959442446435e-15!GO:0008134;transcription factor binding;2.28049527031581e-15!GO:0005794;Golgi apparatus;2.79098273754399e-15!GO:0006259;DNA metabolic process;3.39705862277313e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.9450854972513e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;6.78442076426229e-15!GO:0016462;pyrophosphatase activity;6.98954504158303e-15!GO:0006996;organelle organization and biogenesis;1.05957781446063e-14!GO:0043412;biopolymer modification;1.45960608053779e-14!GO:0022618;protein-RNA complex assembly;1.72699905756641e-14!GO:0044445;cytosolic part;2.2087568286508e-14!GO:0005746;mitochondrial respiratory chain;2.93248448891282e-14!GO:0006457;protein folding;3.22896894104903e-14!GO:0031980;mitochondrial lumen;3.56015996624338e-14!GO:0005759;mitochondrial matrix;3.56015996624338e-14!GO:0017111;nucleoside-triphosphatase activity;4.15015049370801e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.57241954035389e-14!GO:0005783;endoplasmic reticulum;4.62473610328526e-14!GO:0006732;coenzyme metabolic process;6.68852989364944e-14!GO:0030163;protein catabolic process;1.24755679624668e-13!GO:0003676;nucleic acid binding;2.07871632352733e-13!GO:0006464;protein modification process;3.91265657291974e-13!GO:0005768;endosome;4.3145500869371e-13!GO:0000502;proteasome complex (sensu Eukaryota);4.39694154232643e-13!GO:0016604;nuclear body;6.55544153222667e-13!GO:0050136;NADH dehydrogenase (quinone) activity;7.17010260189478e-13!GO:0003954;NADH dehydrogenase activity;7.17010260189478e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.17010260189478e-13!GO:0006913;nucleocytoplasmic transport;1.34679218603541e-12!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.43323877322792e-12!GO:0032553;ribonucleotide binding;1.86899538963214e-12!GO:0032555;purine ribonucleotide binding;1.86899538963214e-12!GO:0048193;Golgi vesicle transport;2.06711766969957e-12!GO:0051169;nuclear transport;2.71293296890872e-12!GO:0042981;regulation of apoptosis;3.92138341618015e-12!GO:0017076;purine nucleotide binding;3.94592668709828e-12!GO:0009056;catabolic process;7.28078441554099e-12!GO:0043067;regulation of programmed cell death;7.28078441554099e-12!GO:0043687;post-translational protein modification;1.02665571244092e-11!GO:0044432;endoplasmic reticulum part;1.17331081951101e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.25014368374315e-11!GO:0015935;small ribosomal subunit;1.42497924119549e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.633741621678e-11!GO:0042773;ATP synthesis coupled electron transport;1.633741621678e-11!GO:0030964;NADH dehydrogenase complex (quinone);3.11526217008475e-11!GO:0045271;respiratory chain complex I;3.11526217008475e-11!GO:0005747;mitochondrial respiratory chain complex I;3.11526217008475e-11!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.2069021755624e-11!GO:0019829;cation-transporting ATPase activity;3.33510588091337e-11!GO:0016070;RNA metabolic process;3.33510588091337e-11!GO:0016787;hydrolase activity;4.15840059479476e-11!GO:0015934;large ribosomal subunit;5.56776983819215e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.27918138681564e-11!GO:0016607;nuclear speck;1.62968424615642e-10!GO:0015986;ATP synthesis coupled proton transport;1.709738492225e-10!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.709738492225e-10!GO:0005730;nucleolus;1.74867214396961e-10!GO:0008135;translation factor activity, nucleic acid binding;1.85491542095865e-10!GO:0016887;ATPase activity;2.63618081752012e-10!GO:0042623;ATPase activity, coupled;2.63618081752012e-10!GO:0005774;vacuolar membrane;2.75764700835392e-10!GO:0005635;nuclear envelope;3.21198246434625e-10!GO:0005524;ATP binding;3.31532393530795e-10!GO:0008639;small protein conjugating enzyme activity;3.84616597233036e-10!GO:0032559;adenyl ribonucleotide binding;4.35394343107897e-10!GO:0051188;cofactor biosynthetic process;4.54790028526524e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.57639123583702e-10!GO:0015078;hydrogen ion transmembrane transporter activity;4.84440844015184e-10!GO:0006446;regulation of translational initiation;5.67036846283336e-10!GO:0004842;ubiquitin-protein ligase activity;8.37489916780313e-10!GO:0005770;late endosome;8.83407035056644e-10!GO:0007243;protein kinase cascade;1.15485893905253e-09!GO:0030554;adenyl nucleotide binding;1.16830566902433e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.5793421171696e-09!GO:0000375;RNA splicing, via transesterification reactions;1.5793421171696e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.5793421171696e-09!GO:0009150;purine ribonucleotide metabolic process;1.75195088616098e-09!GO:0009259;ribonucleotide metabolic process;1.76098251103079e-09!GO:0019787;small conjugating protein ligase activity;1.76098251103079e-09!GO:0006461;protein complex assembly;1.82422150352893e-09!GO:0051246;regulation of protein metabolic process;1.90294525058094e-09!GO:0009055;electron carrier activity;2.07944252330366e-09!GO:0044437;vacuolar part;2.13932996206828e-09!GO:0006163;purine nucleotide metabolic process;2.13932996206828e-09!GO:0051082;unfolded protein binding;2.25829308974247e-09!GO:0006413;translational initiation;2.4659291418374e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.78569929676513e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.78619179717918e-09!GO:0006754;ATP biosynthetic process;3.27193707535313e-09!GO:0006753;nucleoside phosphate metabolic process;3.27193707535313e-09!GO:0016469;proton-transporting two-sector ATPase complex;3.59978036326688e-09!GO:0006164;purine nucleotide biosynthetic process;3.79658914106359e-09!GO:0017038;protein import;4.00361690462016e-09!GO:0005789;endoplasmic reticulum membrane;4.0988220770052e-09!GO:0005765;lysosomal membrane;4.65713038440131e-09!GO:0009260;ribonucleotide biosynthetic process;7.08828538325808e-09!GO:0005761;mitochondrial ribosome;8.35751742725423e-09!GO:0000313;organellar ribosome;8.35751742725423e-09!GO:0006974;response to DNA damage stimulus;8.8505929751354e-09!GO:0003743;translation initiation factor activity;9.42928545018442e-09!GO:0046034;ATP metabolic process;1.0626474831654e-08!GO:0009108;coenzyme biosynthetic process;1.13360107716681e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.20750294912565e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.20750294912565e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.26366203376376e-08!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.27140244766005e-08!GO:0008565;protein transporter activity;1.32681071296088e-08!GO:0044440;endosomal part;1.36842898242983e-08!GO:0010008;endosome membrane;1.36842898242983e-08!GO:0003712;transcription cofactor activity;1.63836958901881e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.88167117268817e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.88167117268817e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.11253325034994e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.11253325034994e-08!GO:0005793;ER-Golgi intermediate compartment;2.23490027976444e-08!GO:0043069;negative regulation of programmed cell death;2.44226247867994e-08!GO:0006916;anti-apoptosis;2.62487070479365e-08!GO:0009199;ribonucleoside triphosphate metabolic process;3.02457809382448e-08!GO:0043066;negative regulation of apoptosis;3.05028375393651e-08!GO:0006793;phosphorus metabolic process;3.71222826562347e-08!GO:0006796;phosphate metabolic process;3.71222826562347e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.09272139193375e-08!GO:0031965;nuclear membrane;5.28409920754147e-08!GO:0016881;acid-amino acid ligase activity;5.94745287588316e-08!GO:0009060;aerobic respiration;6.47143349992415e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.65269795238611e-08!GO:0009141;nucleoside triphosphate metabolic process;7.43088708332186e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.69536948286129e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.03485705758016e-07!GO:0002376;immune system process;1.07532202454806e-07!GO:0031982;vesicle;1.10136187244378e-07!GO:0006950;response to stress;1.45859060818249e-07!GO:0016310;phosphorylation;1.81446429845277e-07!GO:0050794;regulation of cellular process;1.81585120407468e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.86921064909231e-07!GO:0044453;nuclear membrane part;2.21286275901964e-07!GO:0051170;nuclear import;2.36250903597511e-07!GO:0007242;intracellular signaling cascade;2.4579214678529e-07!GO:0043228;non-membrane-bound organelle;2.98660847995542e-07!GO:0043232;intracellular non-membrane-bound organelle;2.98660847995542e-07!GO:0004386;helicase activity;3.00352733391318e-07!GO:0045333;cellular respiration;3.27499873125236e-07!GO:0006606;protein import into nucleus;3.90483114224051e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.18510138612275e-07!GO:0031410;cytoplasmic vesicle;5.46933507852452e-07!GO:0050657;nucleic acid transport;6.15572497104941e-07!GO:0051236;establishment of RNA localization;6.15572497104941e-07!GO:0050658;RNA transport;6.15572497104941e-07!GO:0005839;proteasome core complex (sensu Eukaryota);6.92168374828767e-07!GO:0030120;vesicle coat;7.04409273610901e-07!GO:0030662;coated vesicle membrane;7.04409273610901e-07!GO:0006403;RNA localization;8.19642961290931e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.95735671242177e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.04812618679772e-06!GO:0006281;DNA repair;1.101121673616e-06!GO:0048523;negative regulation of cellular process;1.14973318145887e-06!GO:0019899;enzyme binding;1.35574656321595e-06!GO:0048475;coated membrane;1.43892408690613e-06!GO:0030117;membrane coat;1.43892408690613e-06!GO:0016568;chromatin modification;1.59934757016494e-06!GO:0006417;regulation of translation;1.60800552393644e-06!GO:0065009;regulation of a molecular function;1.64537122454987e-06!GO:0006099;tricarboxylic acid cycle;1.81210279982629e-06!GO:0046356;acetyl-CoA catabolic process;1.81210279982629e-06!GO:0008654;phospholipid biosynthetic process;1.87431997886408e-06!GO:0008026;ATP-dependent helicase activity;1.91814139376926e-06!GO:0007049;cell cycle;2.04780453077199e-06!GO:0005643;nuclear pore;2.07785252104638e-06!GO:0006752;group transfer coenzyme metabolic process;2.11569792452053e-06!GO:0044431;Golgi apparatus part;2.18307250623021e-06!GO:0032446;protein modification by small protein conjugation;2.29705999332409e-06!GO:0000151;ubiquitin ligase complex;2.43724892460116e-06!GO:0009615;response to virus;3.45908147231244e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;3.54066326087644e-06!GO:0031988;membrane-bound vesicle;3.57159945651417e-06!GO:0051187;cofactor catabolic process;3.68525897514225e-06!GO:0004298;threonine endopeptidase activity;3.91540782388607e-06!GO:0008047;enzyme activator activity;4.07320144998423e-06!GO:0016567;protein ubiquitination;4.09834974151834e-06!GO:0031902;late endosome membrane;4.12458440679109e-06!GO:0043566;structure-specific DNA binding;5.23970978453892e-06!GO:0007040;lysosome organization and biogenesis;5.28012596715092e-06!GO:0031252;leading edge;5.35203780328739e-06!GO:0003697;single-stranded DNA binding;5.38193293956054e-06!GO:0006084;acetyl-CoA metabolic process;5.51421967695183e-06!GO:0007264;small GTPase mediated signal transduction;6.92196326789204e-06!GO:0006955;immune response;7.86919079653971e-06!GO:0045259;proton-transporting ATP synthase complex;7.96229141788954e-06!GO:0065002;intracellular protein transport across a membrane;7.96229141788954e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.96229141788954e-06!GO:0015399;primary active transmembrane transporter activity;7.96229141788954e-06!GO:0006323;DNA packaging;9.08625983828982e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.23820121730736e-06!GO:0046930;pore complex;1.02352825937116e-05!GO:0022890;inorganic cation transmembrane transporter activity;1.02560946843285e-05!GO:0016740;transferase activity;1.03998319679589e-05!GO:0009719;response to endogenous stimulus;1.0581176272491e-05!GO:0048519;negative regulation of biological process;1.10872081447298e-05!GO:0006818;hydrogen transport;1.11361261063477e-05!GO:0051276;chromosome organization and biogenesis;1.1440537837728e-05!GO:0009117;nucleotide metabolic process;1.21141578812256e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.2257023397577e-05!GO:0005798;Golgi-associated vesicle;1.22750194615464e-05!GO:0003713;transcription coactivator activity;1.36248354797887e-05!GO:0016044;membrane organization and biogenesis;1.37593773585749e-05!GO:0005096;GTPase activator activity;1.41130359735939e-05!GO:0051028;mRNA transport;1.44347854215254e-05!GO:0009109;coenzyme catabolic process;1.46247039243916e-05!GO:0007033;vacuole organization and biogenesis;1.71814801866755e-05!GO:0043065;positive regulation of apoptosis;1.73700547470296e-05!GO:0007005;mitochondrion organization and biogenesis;1.8065508012335e-05!GO:0015992;proton transport;1.82224728696216e-05!GO:0006613;cotranslational protein targeting to membrane;1.9165649876457e-05!GO:0050789;regulation of biological process;2.01399201938129e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.09153761163405e-05!GO:0031326;regulation of cellular biosynthetic process;2.19520268294689e-05!GO:0043068;positive regulation of programmed cell death;2.60358244652313e-05!GO:0043492;ATPase activity, coupled to movement of substances;2.7689776642479e-05!GO:0006399;tRNA metabolic process;2.78567261066415e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.08278777719049e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.08278777719049e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.08278777719049e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;3.47965869660447e-05!GO:0006917;induction of apoptosis;3.56893800003847e-05!GO:0005769;early endosome;4.15396117512609e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;4.2477684597427e-05!GO:0006643;membrane lipid metabolic process;4.30190678014262e-05!GO:0043038;amino acid activation;4.57828121369514e-05!GO:0006418;tRNA aminoacylation for protein translation;4.57828121369514e-05!GO:0043039;tRNA aminoacylation;4.57828121369514e-05!GO:0016491;oxidoreductase activity;4.83737301636185e-05!GO:0006366;transcription from RNA polymerase II promoter;4.98404697934517e-05!GO:0012502;induction of programmed cell death;5.35742631488081e-05!GO:0051726;regulation of cell cycle;5.49669020405244e-05!GO:0009889;regulation of biosynthetic process;5.49669020405244e-05!GO:0030695;GTPase regulator activity;5.79195712331859e-05!GO:0007265;Ras protein signal transduction;6.1178590230299e-05!GO:0006672;ceramide metabolic process;6.15251916340584e-05!GO:0000074;regulation of progression through cell cycle;6.39626497792076e-05!GO:0042254;ribosome biogenesis and assembly;6.95904322012145e-05!GO:0006401;RNA catabolic process;6.9716405328367e-05!GO:0030532;small nuclear ribonucleoprotein complex;6.99164918793155e-05!GO:0000245;spliceosome assembly;7.06341407806279e-05!GO:0000139;Golgi membrane;7.37325075597257e-05!GO:0032940;secretion by cell;8.86332085206296e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.51551245091593e-05!GO:0007034;vacuolar transport;0.000102020085129805!GO:0043087;regulation of GTPase activity;0.000102020085129805!GO:0006091;generation of precursor metabolites and energy;0.000111360291190232!GO:0008234;cysteine-type peptidase activity;0.000129659630824809!GO:0009967;positive regulation of signal transduction;0.000132208972074681!GO:0016197;endosome transport;0.000135648418161024!GO:0043623;cellular protein complex assembly;0.000146389292444801!GO:0046519;sphingoid metabolic process;0.0001475668773027!GO:0051168;nuclear export;0.000153349460922126!GO:0005525;GTP binding;0.00016747319630879!GO:0006612;protein targeting to membrane;0.000168087654785055!GO:0016564;transcription repressor activity;0.000168087654785055!GO:0045786;negative regulation of progression through cell cycle;0.000169480054283067!GO:0006650;glycerophospholipid metabolic process;0.000185151198756041!GO:0045045;secretory pathway;0.000185978598927953!GO:0003724;RNA helicase activity;0.000192124888625211!GO:0005885;Arp2/3 protein complex;0.000199691613001315!GO:0051336;regulation of hydrolase activity;0.000217834200234998!GO:0048522;positive regulation of cellular process;0.000231909322643292!GO:0044262;cellular carbohydrate metabolic process;0.000240785316426594!GO:0005083;small GTPase regulator activity;0.000257966490282006!GO:0046467;membrane lipid biosynthetic process;0.000258064089814616!GO:0008632;apoptotic program;0.000258426203008358!GO:0016779;nucleotidyltransferase activity;0.000259769022552778!GO:0001726;ruffle;0.000259812854131046!GO:0050790;regulation of catalytic activity;0.000339694274592241!GO:0046474;glycerophospholipid biosynthetic process;0.000367829039238102!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000374651978887629!GO:0016563;transcription activator activity;0.00038777553331312!GO:0005813;centrosome;0.000430211673159373!GO:0005694;chromosome;0.0004711101943777!GO:0022402;cell cycle process;0.000476136096141084!GO:0006402;mRNA catabolic process;0.000594007009450662!GO:0051427;hormone receptor binding;0.000643624623953575!GO:0048518;positive regulation of biological process;0.000785431090849605!GO:0032318;regulation of Ras GTPase activity;0.000834496263129205!GO:0006644;phospholipid metabolic process;0.000834736483871207!GO:0005741;mitochondrial outer membrane;0.000850351115641934!GO:0030384;phosphoinositide metabolic process;0.000886959607902675!GO:0033116;ER-Golgi intermediate compartment membrane;0.000902487664340045!GO:0030149;sphingolipid catabolic process;0.000929913778398461!GO:0019867;outer membrane;0.000952774808618548!GO:0009165;nucleotide biosynthetic process;0.000955991494357333!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000971062045714762!GO:0019222;regulation of metabolic process;0.000988198633187864!GO:0045454;cell redox homeostasis;0.000995604344875875!GO:0030027;lamellipodium;0.00101397595501014!GO:0003924;GTPase activity;0.00107122620467279!GO:0019377;glycolipid catabolic process;0.00108106503409549!GO:0035257;nuclear hormone receptor binding;0.00109108284857178!GO:0065007;biological regulation;0.00116569359975971!GO:0044255;cellular lipid metabolic process;0.00116862668229513!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00118002483625649!GO:0005099;Ras GTPase activator activity;0.00121368066949685!GO:0006607;NLS-bearing substrate import into nucleus;0.00123850301634458!GO:0007041;lysosomal transport;0.00136639558407227!GO:0006333;chromatin assembly or disassembly;0.00136714688791339!GO:0031968;organelle outer membrane;0.00136936706399159!GO:0003729;mRNA binding;0.00141016845179817!GO:0032561;guanyl ribonucleotide binding;0.00144162016480388!GO:0019001;guanyl nucleotide binding;0.00144162016480388!GO:0043021;ribonucleoprotein binding;0.0014444744221001!GO:0016853;isomerase activity;0.00147097011891247!GO:0005815;microtubule organizing center;0.00150541764469227!GO:0016072;rRNA metabolic process;0.00150568472678424!GO:0031324;negative regulation of cellular metabolic process;0.00154925182914731!GO:0004197;cysteine-type endopeptidase activity;0.00156112642110997!GO:0030658;transport vesicle membrane;0.0016445417529521!GO:0006364;rRNA processing;0.00169881823861401!GO:0006310;DNA recombination;0.00171397405724801!GO:0003690;double-stranded DNA binding;0.00171657825260722!GO:0006260;DNA replication;0.00172084039218007!GO:0005788;endoplasmic reticulum lumen;0.00176695554720989!GO:0015980;energy derivation by oxidation of organic compounds;0.00176695554720989!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0018051355816506!GO:0006897;endocytosis;0.00181096982729073!GO:0010324;membrane invagination;0.00181096982729073!GO:0008186;RNA-dependent ATPase activity;0.0019271358265314!GO:0046489;phosphoinositide biosynthetic process;0.00197453984703552!GO:0044427;chromosomal part;0.00200595136594295!GO:0003714;transcription corepressor activity;0.00205358663614386!GO:0046822;regulation of nucleocytoplasmic transport;0.00231993724647093!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00231993724647093!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00231993724647093!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00231993724647093!GO:0005762;mitochondrial large ribosomal subunit;0.00231993724647093!GO:0000315;organellar large ribosomal subunit;0.00231993724647093!GO:0065004;protein-DNA complex assembly;0.00249353149897868!GO:0030133;transport vesicle;0.00278898319741917!GO:0022415;viral reproductive process;0.00288653934406101!GO:0030176;integral to endoplasmic reticulum membrane;0.00288653934406101!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00292763173371173!GO:0030134;ER to Golgi transport vesicle;0.00294522423538975!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0029893838715483!GO:0005975;carbohydrate metabolic process;0.00301197115184765!GO:0004177;aminopeptidase activity;0.00309836444436162!GO:0048471;perinuclear region of cytoplasm;0.00318435628008282!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00332137803880742!GO:0046483;heterocycle metabolic process;0.00367247545266009!GO:0016363;nuclear matrix;0.00369710641171251!GO:0046479;glycosphingolipid catabolic process;0.00383190856120394!GO:0006891;intra-Golgi vesicle-mediated transport;0.00402570922918007!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0041460967024419!GO:0030660;Golgi-associated vesicle membrane;0.00469540232562327!GO:0030867;rough endoplasmic reticulum membrane;0.00470666923547521!GO:0030127;COPII vesicle coat;0.00474586987033996!GO:0012507;ER to Golgi transport vesicle membrane;0.00474586987033996!GO:0045321;leukocyte activation;0.00489126942689838!GO:0000785;chromatin;0.00499423682682997!GO:0004004;ATP-dependent RNA helicase activity;0.00516155027378087!GO:0009892;negative regulation of metabolic process;0.00519518533297287!GO:0031072;heat shock protein binding;0.00533743327196963!GO:0030118;clathrin coat;0.00533862478377497!GO:0048500;signal recognition particle;0.00551712730207481!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00554035152533479!GO:0016251;general RNA polymerase II transcription factor activity;0.00556811953928748!GO:0015036;disulfide oxidoreductase activity;0.00603814920233682!GO:0042613;MHC class II protein complex;0.00609862580025586!GO:0009966;regulation of signal transduction;0.00620699403455557!GO:0006767;water-soluble vitamin metabolic process;0.0063170586394099!GO:0060090;molecular adaptor activity;0.00650643821612354!GO:0042110;T cell activation;0.00656078422657253!GO:0003725;double-stranded RNA binding;0.00676187926808587!GO:0004185;serine carboxypeptidase activity;0.00677750968429866!GO:0005667;transcription factor complex;0.00696810514811417!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00705419072656758!GO:0051252;regulation of RNA metabolic process;0.00706740959345157!GO:0030518;steroid hormone receptor signaling pathway;0.00707158727491355!GO:0005048;signal sequence binding;0.00707764086504027!GO:0051789;response to protein stimulus;0.00728946624672313!GO:0006986;response to unfolded protein;0.00728946624672313!GO:0004674;protein serine/threonine kinase activity;0.00730816145365254!GO:0031901;early endosome membrane;0.0074889723858749!GO:0030663;COPI coated vesicle membrane;0.00785064045234602!GO:0030126;COPI vesicle coat;0.00785064045234602!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00817640134509368!GO:0008287;protein serine/threonine phosphatase complex;0.00831923384358625!GO:0006611;protein export from nucleus;0.0083564246871746!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0083564246871746!GO:0046649;lymphocyte activation;0.00840649679654664!GO:0000096;sulfur amino acid metabolic process;0.00853429796092991!GO:0031625;ubiquitin protein ligase binding;0.0085574078438182!GO:0005791;rough endoplasmic reticulum;0.0087663451793301!GO:0019752;carboxylic acid metabolic process;0.00901124934385576!GO:0030137;COPI-coated vesicle;0.00903206934213008!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00939446486322079!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00939446486322079!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00947999930975428!GO:0015002;heme-copper terminal oxidase activity;0.00947999930975428!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00947999930975428!GO:0004129;cytochrome-c oxidase activity;0.00947999930975428!GO:0008610;lipid biosynthetic process;0.00959448348283554!GO:0051920;peroxiredoxin activity;0.00991007949681232!GO:0009607;response to biotic stimulus;0.00995714096357014!GO:0016481;negative regulation of transcription;0.010001820654523!GO:0030984;kininogen binding;0.0101955431540444!GO:0004213;cathepsin B activity;0.0101955431540444!GO:0006082;organic acid metabolic process;0.010345445118732!GO:0051098;regulation of binding;0.0104811964395918!GO:0042802;identical protein binding;0.0105177067899715!GO:0015923;mannosidase activity;0.0106234240356375!GO:0016859;cis-trans isomerase activity;0.0106554533928976!GO:0000314;organellar small ribosomal subunit;0.0106554533928976!GO:0005763;mitochondrial small ribosomal subunit;0.0106554533928976!GO:0043488;regulation of mRNA stability;0.0106554533928976!GO:0043487;regulation of RNA stability;0.0106554533928976!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0106554533928976!GO:0045047;protein targeting to ER;0.0106554533928976!GO:0006665;sphingolipid metabolic process;0.010683225680454!GO:0002443;leukocyte mediated immunity;0.0110955813962182!GO:0048468;cell development;0.0113195436696522!GO:0000287;magnesium ion binding;0.011397116780801!GO:0006516;glycoprotein catabolic process;0.0118661550470576!GO:0006689;ganglioside catabolic process;0.0119362080505722!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0119987598950025!GO:0022406;membrane docking;0.012046984711399!GO:0048278;vesicle docking;0.012046984711399!GO:0006383;transcription from RNA polymerase III promoter;0.0120833284803403!GO:0000118;histone deacetylase complex;0.0120988535403844!GO:0007006;mitochondrial membrane organization and biogenesis;0.012306599372601!GO:0030036;actin cytoskeleton organization and biogenesis;0.012306599372601!GO:0046466;membrane lipid catabolic process;0.0125120677384459!GO:0051223;regulation of protein transport;0.0126803682038125!GO:0048002;antigen processing and presentation of peptide antigen;0.012968519396678!GO:0043681;protein import into mitochondrion;0.0130900592436014!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0131158145450782!GO:0044438;microbody part;0.0131983534048958!GO:0044439;peroxisomal part;0.0131983534048958!GO:0051539;4 iron, 4 sulfur cluster binding;0.0134490908906448!GO:0006749;glutathione metabolic process;0.014151655981871!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0142470634884233!GO:0051235;maintenance of localization;0.0142470634884233!GO:0006914;autophagy;0.0142470634884233!GO:0035035;histone acetyltransferase binding;0.0146093808883541!GO:0031323;regulation of cellular metabolic process;0.0146131379981244!GO:0002252;immune effector process;0.0146131379981244!GO:0008312;7S RNA binding;0.0146166445609251!GO:0006352;transcription initiation;0.0150687296659323!GO:0006904;vesicle docking during exocytosis;0.0153563851958662!GO:0003711;transcription elongation regulator activity;0.0155184953691408!GO:0004563;beta-N-acetylhexosaminidase activity;0.0155629484108591!GO:0008139;nuclear localization sequence binding;0.0155629484108591!GO:0019904;protein domain specific binding;0.015659813310308!GO:0006629;lipid metabolic process;0.0156882385536986!GO:0001887;selenium metabolic process;0.016012048165362!GO:0016798;hydrolase activity, acting on glycosyl bonds;0.0160786197433969!GO:0002250;adaptive immune response;0.0164913228889813!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0164913228889813!GO:0042158;lipoprotein biosynthetic process;0.0165246665402229!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0165491783340005!GO:0045309;protein phosphorylated amino acid binding;0.0166735834687309!GO:0006497;protein amino acid lipidation;0.0167575768529638!GO:0006733;oxidoreduction coenzyme metabolic process;0.0167780348995189!GO:0050749;apolipoprotein E receptor binding;0.0171225611832822!GO:0050662;coenzyme binding;0.0171988527695711!GO:0048487;beta-tubulin binding;0.0173985375159462!GO:0017166;vinculin binding;0.0174220241942172!GO:0002757;immune response-activating signal transduction;0.0177599347704334!GO:0004192;cathepsin D activity;0.0181469879207436!GO:0019079;viral genome replication;0.0183407040383009!GO:0016584;nucleosome positioning;0.0189365505804139!GO:0005905;coated pit;0.0193162944429611!GO:0000059;protein import into nucleus, docking;0.0195305856444738!GO:0019318;hexose metabolic process;0.0195871332818177!GO:0016301;kinase activity;0.0197103885679446!GO:0003899;DNA-directed RNA polymerase activity;0.0200098661722964!GO:0006778;porphyrin metabolic process;0.0201013439661658!GO:0033013;tetrapyrrole metabolic process;0.0201013439661658!GO:0006302;double-strand break repair;0.0206706947696042!GO:0031903;microbody membrane;0.0206765267250467!GO:0005778;peroxisomal membrane;0.0206765267250467!GO:0008637;apoptotic mitochondrial changes;0.0208668120680097!GO:0030132;clathrin coat of coated pit;0.0210218665056379!GO:0047485;protein N-terminus binding;0.0212630986323313!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0217589644210167!GO:0004218;cathepsin S activity;0.0224527396371726!GO:0001784;phosphotyrosine binding;0.022463368380264!GO:0006979;response to oxidative stress;0.022463368380264!GO:0004518;nuclease activity;0.0225369728795325!GO:0030119;AP-type membrane coat adaptor complex;0.0225369728795325!GO:0005684;U2-dependent spliceosome;0.0225414974776252!GO:0005637;nuclear inner membrane;0.0226655081645384!GO:0005869;dynactin complex;0.0234945200322794!GO:0004576;oligosaccharyl transferase activity;0.023614452828367!GO:0019058;viral infectious cycle;0.023614452828367!GO:0051452;cellular pH reduction;0.023614452828367!GO:0051453;regulation of cellular pH;0.023614452828367!GO:0045851;pH reduction;0.023614452828367!GO:0051540;metal cluster binding;0.0237412037553245!GO:0051536;iron-sulfur cluster binding;0.0237412037553245!GO:0000209;protein polyubiquitination;0.0238198746567148!GO:0042168;heme metabolic process;0.0238829138906028!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0238829138906028!GO:0016788;hydrolase activity, acting on ester bonds;0.0238924312418155!GO:0035258;steroid hormone receptor binding;0.0239074829910954!GO:0005996;monosaccharide metabolic process;0.0240761847677092!GO:0004553;hydrolase activity, hydrolyzing O-glycosyl compounds;0.0240912465817491!GO:0051881;regulation of mitochondrial membrane potential;0.0241613689009336!GO:0005777;peroxisome;0.024195617551892!GO:0042579;microbody;0.024195617551892!GO:0016605;PML body;0.0242835562157869!GO:0019362;pyridine nucleotide metabolic process;0.0243813254893728!GO:0008250;oligosaccharyl transferase complex;0.0246388967425475!GO:0002440;production of molecular mediator of immune response;0.0253979164951312!GO:0006661;phosphatidylinositol biosynthetic process;0.0256624187016844!GO:0005057;receptor signaling protein activity;0.0257631711876713!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0257631711876713!GO:0006405;RNA export from nucleus;0.0257631711876713!GO:0033033;negative regulation of myeloid cell apoptosis;0.0257631711876713!GO:0001803;regulation of type III hypersensitivity;0.0257631711876713!GO:0032733;positive regulation of interleukin-10 production;0.0257631711876713!GO:0033025;regulation of mast cell apoptosis;0.0257631711876713!GO:0001805;positive regulation of type III hypersensitivity;0.0257631711876713!GO:0033023;mast cell homeostasis;0.0257631711876713!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0257631711876713!GO:0033032;regulation of myeloid cell apoptosis;0.0257631711876713!GO:0001802;type III hypersensitivity;0.0257631711876713!GO:0033028;myeloid cell apoptosis;0.0257631711876713!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0257631711876713!GO:0033026;negative regulation of mast cell apoptosis;0.0257631711876713!GO:0033024;mast cell apoptosis;0.0257631711876713!GO:0030503;regulation of cell redox homeostasis;0.0257926964745513!GO:0006839;mitochondrial transport;0.0257998251053031!GO:0033157;regulation of intracellular protein transport;0.0258355284446401!GO:0042306;regulation of protein import into nucleus;0.0258355284446401!GO:0050811;GABA receptor binding;0.0258355284446401!GO:0006740;NADPH regeneration;0.0258355284446401!GO:0006098;pentose-phosphate shunt;0.0258355284446401!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0258355284446401!GO:0046983;protein dimerization activity;0.025884454802923!GO:0030125;clathrin vesicle coat;0.0260095355110799!GO:0030665;clathrin coated vesicle membrane;0.0260095355110799!GO:0006414;translational elongation;0.0260095355110799!GO:0030041;actin filament polymerization;0.0264488194440257!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0265177725082894!GO:0016791;phosphoric monoester hydrolase activity;0.0266734528000938!GO:0030880;RNA polymerase complex;0.0268208994965445!GO:0051287;NAD binding;0.0274766304597597!GO:0051090;regulation of transcription factor activity;0.0278979397612734!GO:0051251;positive regulation of lymphocyte activation;0.0279668387594934!GO:0030522;intracellular receptor-mediated signaling pathway;0.0280443383311878!GO:0006509;membrane protein ectodomain proteolysis;0.028383096945736!GO:0033619;membrane protein proteolysis;0.028383096945736!GO:0030131;clathrin adaptor complex;0.0286750040428768!GO:0016408;C-acyltransferase activity;0.0287137711146101!GO:0004428;inositol or phosphatidylinositol kinase activity;0.029011251731582!GO:0006769;nicotinamide metabolic process;0.0294662267568776!GO:0030521;androgen receptor signaling pathway;0.0298895163765479!GO:0045947;negative regulation of translational initiation;0.0299565326884058!GO:0002764;immune response-regulating signal transduction;0.0304249607125356!GO:0051087;chaperone binding;0.0304639229412935!GO:0043621;protein self-association;0.0305140872722519!GO:0006595;polyamine metabolic process;0.0307673712933201!GO:0031301;integral to organelle membrane;0.0311874698879827!GO:0006458;'de novo' protein folding;0.0312076255666488!GO:0051084;'de novo' posttranslational protein folding;0.0312076255666488!GO:0051219;phosphoprotein binding;0.0312897247793193!GO:0018193;peptidyl-amino acid modification;0.03174827563622!GO:0004722;protein serine/threonine phosphatase activity;0.0317515940090898!GO:0016860;intramolecular oxidoreductase activity;0.0320201295036839!GO:0005097;Rab GTPase activator activity;0.032485759017415!GO:0019747;regulation of isoprenoid metabolic process;0.0328985233120016!GO:0000303;response to superoxide;0.0329897360375126!GO:0046966;thyroid hormone receptor binding;0.0332861653135582!GO:0051059;NF-kappaB binding;0.0334837471255753!GO:0005070;SH3/SH2 adaptor activity;0.0338248626982128!GO:0002449;lymphocyte mediated immunity;0.0338667368904314!GO:0046578;regulation of Ras protein signal transduction;0.0344105948738411!GO:0006354;RNA elongation;0.0346155443539922!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0346895560556655!GO:0030258;lipid modification;0.0347251881138753!GO:0030029;actin filament-based process;0.0347671552307756!GO:0007050;cell cycle arrest;0.0347671552307756!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0347671552307756!GO:0006376;mRNA splice site selection;0.0347671552307756!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0347671552307756!GO:0002253;activation of immune response;0.0350475404622064!GO:0000278;mitotic cell cycle;0.0351192651434536!GO:0005784;translocon complex;0.0364199326741234!GO:0004559;alpha-mannosidase activity;0.0367389269406612!GO:0032428;beta-N-acetylgalactosaminidase activity;0.0372958355381485!GO:0030290;sphingolipid activator protein activity;0.0372958355381485!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0372958355381485!GO:0032313;regulation of Rab GTPase activity;0.0378762035507842!GO:0032483;regulation of Rab protein signal transduction;0.0378762035507842!GO:0032482;Rab protein signal transduction;0.0378762035507842!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0380986130354883!GO:0015631;tubulin binding;0.0382993893228165!GO:0006013;mannose metabolic process;0.0388714565678119!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0392902341441744!GO:0001816;cytokine production;0.0402479033183899!GO:0019843;rRNA binding;0.0407114643834042!GO:0032507;maintenance of cellular protein localization;0.0409717428551131!GO:0009112;nucleobase metabolic process;0.0414076061124186!GO:0042585;germinal vesicle;0.0415579876047563!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0415759502156435!GO:0001573;ganglioside metabolic process;0.0416606006349962!GO:0046914;transition metal ion binding;0.0420195759003345!GO:0031124;mRNA 3'-end processing;0.0425096119339225!GO:0051092;activation of NF-kappaB transcription factor;0.0425096119339225!GO:0006506;GPI anchor biosynthetic process;0.0425657160941238!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0439586846367101!GO:0004448;isocitrate dehydrogenase activity;0.0441006559368596!GO:0006338;chromatin remodeling;0.0441006559368596!GO:0045637;regulation of myeloid cell differentiation;0.0442033224177673!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0446599819479053!GO:0000428;DNA-directed RNA polymerase complex;0.0446599819479053!GO:0001775;cell activation;0.0451372834912522!GO:0006892;post-Golgi vesicle-mediated transport;0.0460919038101326!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0460919038101326!GO:0010257;NADH dehydrogenase complex assembly;0.0460919038101326!GO:0033108;mitochondrial respiratory chain complex assembly;0.0460919038101326!GO:0006487;protein amino acid N-linked glycosylation;0.0470190632408186!GO:0030433;ER-associated protein catabolic process;0.0472020069575316!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0472020069575316!GO:0000339;RNA cap binding;0.0472020069575316!GO:0007162;negative regulation of cell adhesion;0.0476413780303667!GO:0006261;DNA-dependent DNA replication;0.0476684862943941!GO:0042287;MHC protein binding;0.0478688274244179!GO:0016581;NuRD complex;0.0482570939107039!GO:0006622;protein targeting to lysosome;0.048350770688718!GO:0008624;induction of apoptosis by extracellular signals;0.048600845546727!GO:0006626;protein targeting to mitochondrion;0.0497398432064812
|sample_id=11310
|sample_note=former endothelial progenitor cells
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11310-117C5;search_select_hide=table117:FF:11310-117C5
}}
}}

Latest revision as of 16:32, 3 June 2020

Name:CD14+ monocyte derived endothelial progenitor cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11897
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage57 years old adult
sexfemale
age57
cell typeblood vessel endothelial progenitor cell
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberEPC723
catalog number3H100-81-10
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004810
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11897 CAGE DRX008130 DRR009002
Accession ID Hg19

Library idBAMCTSS
CNhs11897 DRZ000427 DRZ001812
Accession ID Hg38

Library idBAMCTSS
CNhs11897 DRZ011777 DRZ013162
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004810
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10009.AGTCAA sRNA-Seq DRX037137 DRR041503
Accession ID Hg19

Library idBAMCTSS
SRhi10009.AGTCAA DRZ007145


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.17
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.287
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.718
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0163
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.122
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.214
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.217
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.306
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.627
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.184
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.39
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.134
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.122
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.549
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.763
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.291
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0983
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0582
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.217
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.58
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral1.219
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.242
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.03
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.502
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung1.097
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.555
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.217
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11897

Jaspar motifP-value
MA0002.21.11722e-8
MA0003.10.106
MA0004.10.147
MA0006.10.747
MA0007.10.0752
MA0009.10.214
MA0014.10.29
MA0017.12.02755e-4
MA0018.25.15247e-4
MA0019.10.547
MA0024.10.0275
MA0025.10.682
MA0027.10.491
MA0028.10.322
MA0029.10.961
MA0030.10.473
MA0031.10.427
MA0035.20.815
MA0038.10.116
MA0039.20.177
MA0040.10.642
MA0041.10.519
MA0042.10.903
MA0043.10.0095
MA0046.10.353
MA0047.20.253
MA0048.10.101
MA0050.19.11354e-8
MA0051.10.00205
MA0052.10.0273
MA0055.10.12
MA0057.10.753
MA0058.10.0123
MA0059.10.489
MA0060.12.42459e-5
MA0061.10.202
MA0062.25.1975e-6
MA0065.20.00536
MA0066.10.102
MA0067.10.102
MA0068.10.529
MA0069.10.722
MA0070.10.0548
MA0071.10.328
MA0072.10.895
MA0073.10.572
MA0074.10.213
MA0076.10.214
MA0077.10.472
MA0078.10.531
MA0079.20.231
MA0080.29.66993e-18
MA0081.11.7069e-4
MA0083.17.86475e-4
MA0084.10.281
MA0087.10.259
MA0088.10.219
MA0090.10.00502
MA0091.10.486
MA0092.10.936
MA0093.10.138
MA0099.20.0633
MA0100.10.964
MA0101.10.892
MA0102.20.00611
MA0103.10.309
MA0104.20.674
MA0105.10.0184
MA0106.10.249
MA0107.10.933
MA0108.22.29542e-9
MA0111.10.255
MA0112.20.00111
MA0113.10.157
MA0114.10.00727
MA0115.10.43
MA0116.11.08113e-4
MA0117.10.875
MA0119.10.954
MA0122.10.231
MA0124.10.492
MA0125.10.726
MA0131.10.48
MA0135.10.24
MA0136.17.4252e-18
MA0137.20.0521
MA0138.20.837
MA0139.10.554
MA0140.10.741
MA0141.10.138
MA0142.10.302
MA0143.10.247
MA0144.10.0484
MA0145.10.374
MA0146.10.0101
MA0147.10.923
MA0148.10.859
MA0149.10.122
MA0150.10.198
MA0152.10.361
MA0153.10.206
MA0154.10.00134
MA0155.10.881
MA0156.12.61788e-12
MA0157.10.117
MA0159.10.0246
MA0160.10.0349
MA0162.10.794
MA0163.13.4419e-6
MA0164.10.635
MA0258.10.00334
MA0259.10.462



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11897

Novel motifP-value
10.159
100.024
1000.869
1010.238
1020.836
1030.109
1040.952
1050.254
1060.135
1070.49
1080.815
1090.081
110.0887
1100.342
1110.013
1120.236
1130.722
1140.0597
1150.21
1160.881
1170.02
1180.354
1190.078
120.449
1200.414
1210.909
1220.72
1230.0486
1240.146
1250.628
1260.134
1270.111
1280.119
1290.904
130.102
1300.585
1310.303
1320.889
1330.949
1340.595
1350.0678
1360.867
1370.0177
1380.0434
1390.0293
140.167
1400.482
1410.424
1420.185
1430.121
1440.445
1450.278
1460.52
1470.145
1480.025
1490.806
150.162
1500.577
1510.762
1520.389
1530.698
1540.833
1550.0747
1560.567
1570.741
1580.545
1590.215
160.342
1600.649
1610.296
1620.68
1630.313
1640.29
1650.305
1660.261
1670.609
1680.143
1690.016
170.385
180.535
190.387
20.801
200.966
210.273
220.178
230.465
240.0518
250.359
260.152
270.0574
280.549
290.245
30.0214
300.857
310.494
320.813
330.644
340.276
350.32
360.155
370.142
380.153
390.833
40.882
400.19
410.203
420.396
430.0983
440.362
450.536
460.283
470.372
480.244
490.128
50.21
500.844
510.635
520.378
530.175
540.525
550.0248
560.741
570.65
580.0931
590.176
60.367
600.0829
610.131
620.124
630.375
640.292
650.162
660.917
670.315
680.485
690.938
70.138
700.0216
710.0374
720.227
730.0802
740.845
750.0214
760.332
770.448
780.127
790.468
80.179
800.0461
810.223
820.0689
830.952
840.566
850.0799
860.0235
870.125
880.267
890.497
90.299
900.0202
910.865
920.046
930.896
940.139
950.284
960.218
970.967
980.552
990.55



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11897


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0000766 (myeloid leukocyte)
0002078 (meso-epithelial cell)
0000219 (motile cell)
0000215 (barrier cell)
0000134 (mesenchymal cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000034 (stem cell)
0000576 (monocyte)
0000115 (endothelial cell)
0000566 (angioblastic mesenchymal cell)
0002619 (adult endothelial progenitor cell)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000248 (human endothelial progenitor cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0000222 (mesodermal cell)

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