FF:11386-118B9: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004934 | |DRA_sample_Accession=CAGE@SAMD00004934 | ||
|accession_numbers=CAGE;DRX008131;DRR009003;DRZ000428;DRZ001813 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004934 | ||
|accession_numbers=CAGE;DRX008131;DRR009003;DRZ000428;DRZ001813;DRZ011778;DRZ013163 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037143;DRR041509;DRZ007151 | |||
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000763,CL:0002320,CL:0000066,CL:0002371,CL:0000213,CL:0000766,CL:0002078,CL:0000219,CL:0000215,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000034,CL:0000576,CL:0000115,CL:0000566,CL:0002619 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000988,CL:0000548,CL:0000763,CL:0002320,CL:0000066,CL:0002371,CL:0000213,CL:0000766,CL:0002078,CL:0000219,CL:0000215,CL:0000134,CL:0000738,CL:0002087,CL:0000255,CL:0000034,CL:0000576,CL:0000115,CL:0000566,CL:0002619 | ||
Line 42: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocyte%2520derived%2520endothelial%2520progenitor%2520cells%252c%2520donor3.CNhs11904.11386-118B9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11386-118B9 | |id=FF:11386-118B9 | ||
|is_a=CL:0000576;;EFO:0002091;;FF:0000248 | |is_a=CL:0000576;;EFO:0002091;;FF:0000248 | ||
Line 47: | Line 54: | ||
|library_id=CNhs11904 | |library_id=CNhs11904 | ||
|library_id_phase_based=2:CNhs11904 | |library_id_phase_based=2:CNhs11904 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11386 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.GTGGCC.11386 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11386 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.GTGGCC.11386 | |||
|name=CD14+ monocyte derived endothelial progenitor cells, donor3 | |name=CD14+ monocyte derived endothelial progenitor cells, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 54: | Line 67: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10009,,, | |profile_srnaseq=SRhi10009,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |refex=http://refex.dbcls.jp/genelist.php?lang | ||
|repeat_enrich_byfamily=0,0,0.202882575870939,0,0,0,0,0.020137925484171,0.0995340912392844,0.0509486812559716,-0.282403560576942,0,0.0995340912392844,0,0,0,0,0,0,0,0.485807218285769,0.0995340912392844,0,0,0.0271329452221294,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.0281882219560463,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0.0995340912392844,-0.0969923612426051,0,0,0.210217073091065,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0.0497670456196422,0,0,0,0,0,-0.552571649267773,0,0,0,-0.00442259322770289,-0.211197402695869,0,0,0,0,0.00149874000157797,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.0319117322146298,0.15230864637159,0,0,-0.0235363743139321,0,0,0 | |repeat_enrich_byfamily=0,0,0.202882575870939,0,0,0,0,0.020137925484171,0.0995340912392844,0.0509486812559716,-0.282403560576942,0,0.0995340912392844,0,0,0,0,0,0,0,0.485807218285769,0.0995340912392844,0,0,0.0271329452221294,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.0281882219560463,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0.0995340912392844,-0.0969923612426051,0,0,0.210217073091065,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0.0497670456196422,0,0,0,0,0,-0.552571649267773,0,0,0,-0.00442259322770289,-0.211197402695869,0,0,0,0,0.00149874000157797,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.0319117322146298,0.15230864637159,0,0,-0.0235363743139321,0,0,0 | ||
|repeat_enrich_byname=0,0,0,0,0.00149874000157797,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0.503819865616738,0.0497670456196422,0.046813736804621,0.105126644081362,0,0,-0.302958193607153,0,0.0995340912392844,0,0,0,0,0.180455955570557,0.0995340912392844,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,-0.0186252810838506,0.844865179703464,0,-0.0499371678470928,-0.0683442610773682,0,0,0,0,-0.046426875905522,0,0.186681216510422,-0.0827201683234173,-0.221611588102807,-0.329953049287569,-0.055712496781182,0,0,0,-0.413085794917416,-0.837922957822331,0,0,-0.121779851751874,0.254419021125518,0,0,-0.391044581551635,0,0.422722911041933,-0.07459977332599,0,-0.157703723368185,0,0,0,0,0,0,0,0,0,0,0,0.309731035623865,0.0324442347948757,0,0,0,0,0.263765934164212,0,0,0.210290192965229,-0.181525142632934,0.0677492600884305,-0.476567593789196,0,0.815082149091236,0.00451239260337963,-0.368832341939405,-0.0890914788974192,-0.147401849371139,-0.189981719549847,0,-0.0561540993263138,-0.232904792379819,0,-0.0931406778054782,-0.101758895301553,0.71210067986045,-0.171431171149265,0,0,0,-0.181567438315633,0,-0.0492698408835675,-0.130681883002929,0.0108068516786634,0.285598107755207,0.240805979567028,-0.46100023952195,-0.0797423624595073,-0.0395325284566706,0.293562288005708,0,-0.4215723249037,0,0,0.00942991927729135,0.0228686630752225,-0.122582709768445,0.298628896558366,-0.0275450454171424,0.267021279091322,0.112111694493189,0,-0.435380976323407,-0.030012827799071,0,0,0.108183611581329,0,0,0,0,0,-0.447757980957354,0.41401833017878,0.172909590186334,0,-0.0380574034838035,0,-0.0734722869237845,0,0.0566704144692879,0.105389938693357,0.222825803195337,0.29094254432556,0,0.0789743159305314,0.303995366715334,0.282636890518601,-0.422394805391737,0.711958573051154,0.125762196691688,0.457501588391496,0.228209773877903,0.353411376153446,-0.275752932992257,-0.0881268324752877,0,-0.0596362817930484,0.144410337103807,0.202999529304975,-0.583529904229572,0,0.299704686148071,0,0.120295588804997,0.0139152583386656,-0.432338543809267,-0.181000919999395,0.0465178437050832,0.343957176135229,0,-0.00421768757005747,-0.788130937773974,0,-0.0237425865671464,0,0.180455955570557,-0.150367083334639,-0.697695966512583,1.06690393268214,-0.138989456679195,0,-0.790080158389657,0,0,-0.134086517543286,0.0131657488404452,0,0.329621028041187,0.231169076308602,-0.0206396922734983,-0.0164369821956497,0,0,-0.645700337992725,0,0,-0.506393972578746,0,-0.619783323958633,-0.00468455488192174,0,-0.108622809454255,0,0,-0.177527765965176,0.0995340912392844,0.104557560633279,0,0,-0.200114250979182,0,0,0,0,0.0076168853131749,0,0,0,0,0,0,0,0.200045248566262,-0.255299238977164,0,0.0947988030578781,0,0.0995340912392844,0,0,0,0.0450954358798481,0,0,-1.07143088326305,-0.0683527399529223,-0.12301741567642,0,0,0,0,0.231904184304129,0.156196269379121,0,-0.0323286152583473,0,0,0,0,0.013393101450073,0,0,0.0497670456196422,0.0497670456196422,0.0418036341856204,-0.061362512474642,0,0,0,-0.27695440160179,0.0995340912392844,0,0,0,0.369849472388137,0,0,0.303290473785885,0,-0.0378410064078205,0.017952211692443,0,0.0079945825268995,-0.636916282433645,-0.453386210181043,0,0,0.224460086495882,0,0,0.159451792782404,0,0,0,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0.305007156488347,-0.0922240566585104,0,0,0,0,0,0,0,0.0256610225407391,0.0780000475944895,0,0,0,0,0,0.0995340912392844,0,0,-0.16386523935908,0,0,0,0,0,-0.0969923612426051,0,0,0,0.405765151741878,-0.564807121153884,0,0,0.128403019548364,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237849947961633,0.0509486812559716,0,0.0995340912392844,0,0,0,0.0995340912392844,0,-0.27483329820609,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,0.020137925484171,0,0,0,0,0,0.0844965481969702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0722111176484921,0.0995453145221945,0.000666381418519602,-0.018062499219853,0,0,-0.182861307013399,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.05536993398019,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0920328098005262,0,0,0,0,0,0,-0.0275268628783947,-0.233453354203505,0.0154418773961325,0,0,0,-0.054385572482455,0,0,-0.0465752321064437,0.0995340912392844,0.0327567038203831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0271329452221294,0,0,0,0,0,0,0,0,0,0,0,0.00027685550801862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0.124320893302417,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,0.398733356987651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.04599603547655,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,0.09607932334053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.450969951276428,0,0,0,0,0.0518969805783656,0,0,0,0,0,0,0,0.358140026811126,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,0.049196023722347,0,0,0,0,0,0,0,0,0,0,0,0,0.038213912089158,0,0,0,0,0,0,0.0995340912392844,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0.0433292215231756,0.15230864637159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0497670456196422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212383653615303,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124083427779405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0497670456196422,0,0,0,0,0,0,0,0,0,0,0,0,0.485807218285769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571175620471835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.52086232751032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223813793428802,0,0,0,0,0,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0497670456196422,0.202882575870939,0,0,0,0,0,0,0,0,0.179716415736923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.066577379142295,0,0,0.0497670456196422,0,0,0,0,-0.0231619057577165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192097207380418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139995023404921,0,0,0,0.168899787939856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210217073091065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0499379825215864,0,0,0,0,0,0,0,0,0,0,0.0830708017746095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.421337277099258,0,0,-0.0422874684771159,0,0.00314934171357286,-0.0782964890956352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0877913793429955,0,0,0.042377913313028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383257302015911,0,-0.137088102850501,-0.29754059728273,0,0,-0.299856545238596,0,-0.0158649796534405,-0.0367311208382308,0,0,-0.174992895090299,-0.62701948379671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0.250701754141563,0.53732052595025,0,-0.378836254350424,0,0,-0.707206955127309,0,0,0,-0.0959594073735869 | |repeat_enrich_byname=0,0,0,0,0.00149874000157797,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0.503819865616738,0.0497670456196422,0.046813736804621,0.105126644081362,0,0,-0.302958193607153,0,0.0995340912392844,0,0,0,0,0.180455955570557,0.0995340912392844,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,-0.0186252810838506,0.844865179703464,0,-0.0499371678470928,-0.0683442610773682,0,0,0,0,-0.046426875905522,0,0.186681216510422,-0.0827201683234173,-0.221611588102807,-0.329953049287569,-0.055712496781182,0,0,0,-0.413085794917416,-0.837922957822331,0,0,-0.121779851751874,0.254419021125518,0,0,-0.391044581551635,0,0.422722911041933,-0.07459977332599,0,-0.157703723368185,0,0,0,0,0,0,0,0,0,0,0,0.309731035623865,0.0324442347948757,0,0,0,0,0.263765934164212,0,0,0.210290192965229,-0.181525142632934,0.0677492600884305,-0.476567593789196,0,0.815082149091236,0.00451239260337963,-0.368832341939405,-0.0890914788974192,-0.147401849371139,-0.189981719549847,0,-0.0561540993263138,-0.232904792379819,0,-0.0931406778054782,-0.101758895301553,0.71210067986045,-0.171431171149265,0,0,0,-0.181567438315633,0,-0.0492698408835675,-0.130681883002929,0.0108068516786634,0.285598107755207,0.240805979567028,-0.46100023952195,-0.0797423624595073,-0.0395325284566706,0.293562288005708,0,-0.4215723249037,0,0,0.00942991927729135,0.0228686630752225,-0.122582709768445,0.298628896558366,-0.0275450454171424,0.267021279091322,0.112111694493189,0,-0.435380976323407,-0.030012827799071,0,0,0.108183611581329,0,0,0,0,0,-0.447757980957354,0.41401833017878,0.172909590186334,0,-0.0380574034838035,0,-0.0734722869237845,0,0.0566704144692879,0.105389938693357,0.222825803195337,0.29094254432556,0,0.0789743159305314,0.303995366715334,0.282636890518601,-0.422394805391737,0.711958573051154,0.125762196691688,0.457501588391496,0.228209773877903,0.353411376153446,-0.275752932992257,-0.0881268324752877,0,-0.0596362817930484,0.144410337103807,0.202999529304975,-0.583529904229572,0,0.299704686148071,0,0.120295588804997,0.0139152583386656,-0.432338543809267,-0.181000919999395,0.0465178437050832,0.343957176135229,0,-0.00421768757005747,-0.788130937773974,0,-0.0237425865671464,0,0.180455955570557,-0.150367083334639,-0.697695966512583,1.06690393268214,-0.138989456679195,0,-0.790080158389657,0,0,-0.134086517543286,0.0131657488404452,0,0.329621028041187,0.231169076308602,-0.0206396922734983,-0.0164369821956497,0,0,-0.645700337992725,0,0,-0.506393972578746,0,-0.619783323958633,-0.00468455488192174,0,-0.108622809454255,0,0,-0.177527765965176,0.0995340912392844,0.104557560633279,0,0,-0.200114250979182,0,0,0,0,0.0076168853131749,0,0,0,0,0,0,0,0.200045248566262,-0.255299238977164,0,0.0947988030578781,0,0.0995340912392844,0,0,0,0.0450954358798481,0,0,-1.07143088326305,-0.0683527399529223,-0.12301741567642,0,0,0,0,0.231904184304129,0.156196269379121,0,-0.0323286152583473,0,0,0,0,0.013393101450073,0,0,0.0497670456196422,0.0497670456196422,0.0418036341856204,-0.061362512474642,0,0,0,-0.27695440160179,0.0995340912392844,0,0,0,0.369849472388137,0,0,0.303290473785885,0,-0.0378410064078205,0.017952211692443,0,0.0079945825268995,-0.636916282433645,-0.453386210181043,0,0,0.224460086495882,0,0,0.159451792782404,0,0,0,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0.305007156488347,-0.0922240566585104,0,0,0,0,0,0,0,0.0256610225407391,0.0780000475944895,0,0,0,0,0,0.0995340912392844,0,0,-0.16386523935908,0,0,0,0,0,-0.0969923612426051,0,0,0,0.405765151741878,-0.564807121153884,0,0,0.128403019548364,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237849947961633,0.0509486812559716,0,0.0995340912392844,0,0,0,0.0995340912392844,0,-0.27483329820609,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,0.020137925484171,0,0,0,0,0,0.0844965481969702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0722111176484921,0.0995453145221945,0.000666381418519602,-0.018062499219853,0,0,-0.182861307013399,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.05536993398019,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0920328098005262,0,0,0,0,0,0,-0.0275268628783947,-0.233453354203505,0.0154418773961325,0,0,0,-0.054385572482455,0,0,-0.0465752321064437,0.0995340912392844,0.0327567038203831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0271329452221294,0,0,0,0,0,0,0,0,0,0,0,0.00027685550801862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0.124320893302417,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,0.398733356987651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.04599603547655,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,0.09607932334053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.450969951276428,0,0,0,0,0.0518969805783656,0,0,0,0,0,0,0,0.358140026811126,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,0.049196023722347,0,0,0,0,0,0,0,0,0,0,0,0,0.038213912089158,0,0,0,0,0,0,0.0995340912392844,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0.0433292215231756,0.15230864637159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0497670456196422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212383653615303,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124083427779405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0497670456196422,0,0,0,0,0,0,0,0,0,0,0,0,0.485807218285769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571175620471835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.52086232751032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223813793428802,0,0,0,0,0,0,0,0,0,0,-0.192747187844922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0497670456196422,0.202882575870939,0,0,0,0,0,0,0,0,0.179716415736923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.066577379142295,0,0,0.0497670456196422,0,0,0,0,-0.0231619057577165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192097207380418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139995023404921,0,0,0,0.168899787939856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210217073091065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0499379825215864,0,0,0,0,0,0,0,0,0,0,0.0830708017746095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.421337277099258,0,0,-0.0422874684771159,0,0.00314934171357286,-0.0782964890956352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0877913793429955,0,0,0.042377913313028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383257302015911,0,-0.137088102850501,-0.29754059728273,0,0,-0.299856545238596,0,-0.0158649796534405,-0.0367311208382308,0,0,-0.174992895090299,-0.62701948379671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0995340912392844,0.250701754141563,0.53732052595025,0,-0.378836254350424,0,0,-0.707206955127309,0,0,0,-0.0959594073735869 | ||
Line 69: | Line 82: | ||
|rna_tube_id=118B9 | |rna_tube_id=118B9 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10009.GTGGCC | |||
|sample_age=46 | |sample_age=46 | ||
|sample_category=primary cells | |sample_category=primary cells | ||
Line 92: | Line 106: | ||
|top_motifs=SREBF1,2:3.59320737564;TLX2:2.31425201817;STAT1,3:1.6670426284;EN1,2:1.4975863367;RXRA_VDR{dimer}:1.43483223894;IKZF2:1.33399451742;SPIB:1.31947305056;DMAP1_NCOR{1,2}_SMARC:1.29576435909;IRF1,2:1.21854576005;SPI1:1.20562464209;ELF1,2,4:1.20562451603;IRF7:1.20454978578;AR:1.09851745186;ETS1,2:0.975387412527;RORA:0.949744121685;MAFB:0.909146536405;FOXO1,3,4:0.879162826472;NFE2L2:0.877023767156;TGIF1:0.865479055295;NKX2-2,8:0.838704563917;NFIX:0.772807007922;ARID5B:0.76232818431;FOX{F1,F2,J1}:0.731395657862;NFIL3:0.71606207183;HNF4A_NR2F1,2:0.712907760278;FOX{D1,D2}:0.670985883712;EBF1:0.666027705168;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.590048857119;RUNX1..3:0.562903075591;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.535434039494;CUX2:0.534152909667;VSX1,2:0.532570157566;STAT2,4,6:0.529750364468;NANOG{mouse}:0.519264620993;T:0.509537641735;ESR1:0.502721683153;PAX1,9:0.497881768109;FOXA2:0.490768707488;PAX2:0.440484043879;PDX1:0.415356694385;TFCP2:0.380215159438;FOXN1:0.367891015059;CEBPA,B_DDIT3:0.35690424201;FOXP1:0.316585757723;HMX1:0.305698363028;NKX3-2:0.300357960996;EP300:0.298226518309;PAX8:0.265610737832;ZBTB16:0.261465841405;NHLH1,2:0.234604861759;PRRX1,2:0.231069923107;CDX1,2,4:0.225309190199;FOXP3:0.220436999656;FOXD3:0.213920039065;MYFfamily:0.209065670573;GATA4:0.202112009478;NR6A1:0.195358154521;SMAD1..7,9:0.174449376325;PAX6:0.16918553711;FOX{I1,J2}:0.167573374108;ESRRA:0.165244964209;PRDM1:0.155951261652;TFAP4:0.145479099094;NKX2-3_NKX2-5:0.115047356588;HAND1,2:0.110603466379;POU5F1:0.092363014363;OCT4_SOX2{dimer}:0.0912232327252;BPTF:0.0743591048548;GATA6:0.0637152680595;YY1:0.0608524665349;HBP1_HMGB_SSRP1_UBTF:0.0525508870599;ELK1,4_GABP{A,B1}:0.0511384546536;HLF:0.0412921638096;STAT5{A,B}:0.0398394420832;NFE2:0.0329033168976;MYOD1:0.0170034798492;MYB:-0.0139643021222;ADNP_IRX_SIX_ZHX:-0.0243905646634;NFKB1_REL_RELA:-0.04753568793;TAL1_TCF{3,4,12}:-0.0584647914489;NRF1:-0.059060784278;DBP:-0.0801393797923;SPZ1:-0.083630676397;RBPJ:-0.0888247530108;NR5A1,2:-0.0922535846633;ZNF143:-0.0961818224736;ZNF238:-0.109415690439;RXR{A,B,G}:-0.115666422007;HMGA1,2:-0.141603592562;RFX2..5_RFXANK_RFXAP:-0.149603718782;MTF1:-0.174693075381;NANOG:-0.210572185092;PAX5:-0.210803102273;TOPORS:-0.212775449967;TFAP2{A,C}:-0.223485637803;SP1:-0.224398734547;ZFP161:-0.229312766628;PITX1..3:-0.230889548189;HSF1,2:-0.239630861099;NKX6-1,2:-0.249847265629;LHX3,4:-0.250094601242;ALX1:-0.264091964578;FOSL2:-0.288367494948;ATF4:-0.299349462051;FOXQ1:-0.308135105634;KLF4:-0.308639892812;LMO2:-0.316968093481;MZF1:-0.323572797201;MAZ:-0.330033559888;MED-1{core}:-0.365513489261;SOX2:-0.372066288146;EVI1:-0.372468602955;ZNF148:-0.395969414696;HNF1A:-0.418787979306;GLI1..3:-0.418940966816;PAX4:-0.420599543117;bHLH_family:-0.420836164763;EGR1..3:-0.443222081044;HES1:-0.454746247029;POU1F1:-0.462757450649;REST:-0.463773087908;ATF5_CREB3:-0.477549607362;PPARG:-0.478988843415;CRX:-0.482795072477;PATZ1:-0.485260846629;FOS_FOS{B,L1}_JUN{B,D}:-0.493592926969;ATF2:-0.517290355725;BREu{core}:-0.541479874912;AHR_ARNT_ARNT2:-0.559475555104;SOX{8,9,10}:-0.56049037557;HOX{A4,D4}:-0.573853578082;BACH2:-0.573915906221;AIRE:-0.594905116715;CREB1:-0.623027228633;NR3C1:-0.634596438655;GTF2I:-0.648969439053;ZBTB6:-0.658140128253;HIF1A:-0.663376416923;PAX3,7:-0.685653870463;ZEB1:-0.694773496594;MTE{core}:-0.702422145669;LEF1_TCF7_TCF7L1,2:-0.708117505744;NFATC1..3:-0.711366154913;TLX1..3_NFIC{dimer}:-0.723195799057;GZF1:-0.733115019578;SOX5:-0.74523274756;E2F1..5:-0.754201033652;ALX4:-0.754521372052;XBP1:-0.766708608286;SNAI1..3:-0.769354193551;XCPE1{core}:-0.77410848361;ZNF423:-0.791455060206;HOX{A5,B5}:-0.794931131344;IKZF1:-0.797007735834;MYBL2:-0.838509701337;SOX17:-0.83976622766;HIC1:-0.841743375802;HOX{A6,A7,B6,B7}:-0.846979142348;TFDP1:-0.849407168113;TFAP2B:-0.856369628977;GFI1B:-0.861395553414;MEF2{A,B,C,D}:-0.893319893444;NFY{A,B,C}:-0.90962382597;GTF2A1,2:-0.930357062249;RREB1:-0.969255816206;HOXA9_MEIS1:-1.04120832003;GFI1:-1.06048627278;UFEwm:-1.0810092918;TEAD1:-1.11838275801;FOXM1:-1.12215822174;CDC5L:-1.12435087519;GCM1,2:-1.1402323025;ATF6:-1.18217614687;POU3F1..4:-1.19418379064;NFE2L1:-1.19584404239;TBP:-1.25522821834;NR1H4:-1.27814521235;POU6F1:-1.28518271553;TP53:-1.30910989252;RFX1:-1.32932135042;POU2F1..3:-1.39291923216;SRF:-1.42509571733;NKX3-1:-1.43178705994;PBX1:-1.43516043151;NKX2-1,4:-1.56654875673;TEF:-1.65962011368;ZNF384:-1.66375362937;JUN:-1.69706289228;ONECUT1,2:-1.82674467184;FOXL1:-1.98384228776;TBX4,5:-2.06873620823;ZIC1..3:-2.20316489384 | |top_motifs=SREBF1,2:3.59320737564;TLX2:2.31425201817;STAT1,3:1.6670426284;EN1,2:1.4975863367;RXRA_VDR{dimer}:1.43483223894;IKZF2:1.33399451742;SPIB:1.31947305056;DMAP1_NCOR{1,2}_SMARC:1.29576435909;IRF1,2:1.21854576005;SPI1:1.20562464209;ELF1,2,4:1.20562451603;IRF7:1.20454978578;AR:1.09851745186;ETS1,2:0.975387412527;RORA:0.949744121685;MAFB:0.909146536405;FOXO1,3,4:0.879162826472;NFE2L2:0.877023767156;TGIF1:0.865479055295;NKX2-2,8:0.838704563917;NFIX:0.772807007922;ARID5B:0.76232818431;FOX{F1,F2,J1}:0.731395657862;NFIL3:0.71606207183;HNF4A_NR2F1,2:0.712907760278;FOX{D1,D2}:0.670985883712;EBF1:0.666027705168;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.590048857119;RUNX1..3:0.562903075591;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.535434039494;CUX2:0.534152909667;VSX1,2:0.532570157566;STAT2,4,6:0.529750364468;NANOG{mouse}:0.519264620993;T:0.509537641735;ESR1:0.502721683153;PAX1,9:0.497881768109;FOXA2:0.490768707488;PAX2:0.440484043879;PDX1:0.415356694385;TFCP2:0.380215159438;FOXN1:0.367891015059;CEBPA,B_DDIT3:0.35690424201;FOXP1:0.316585757723;HMX1:0.305698363028;NKX3-2:0.300357960996;EP300:0.298226518309;PAX8:0.265610737832;ZBTB16:0.261465841405;NHLH1,2:0.234604861759;PRRX1,2:0.231069923107;CDX1,2,4:0.225309190199;FOXP3:0.220436999656;FOXD3:0.213920039065;MYFfamily:0.209065670573;GATA4:0.202112009478;NR6A1:0.195358154521;SMAD1..7,9:0.174449376325;PAX6:0.16918553711;FOX{I1,J2}:0.167573374108;ESRRA:0.165244964209;PRDM1:0.155951261652;TFAP4:0.145479099094;NKX2-3_NKX2-5:0.115047356588;HAND1,2:0.110603466379;POU5F1:0.092363014363;OCT4_SOX2{dimer}:0.0912232327252;BPTF:0.0743591048548;GATA6:0.0637152680595;YY1:0.0608524665349;HBP1_HMGB_SSRP1_UBTF:0.0525508870599;ELK1,4_GABP{A,B1}:0.0511384546536;HLF:0.0412921638096;STAT5{A,B}:0.0398394420832;NFE2:0.0329033168976;MYOD1:0.0170034798492;MYB:-0.0139643021222;ADNP_IRX_SIX_ZHX:-0.0243905646634;NFKB1_REL_RELA:-0.04753568793;TAL1_TCF{3,4,12}:-0.0584647914489;NRF1:-0.059060784278;DBP:-0.0801393797923;SPZ1:-0.083630676397;RBPJ:-0.0888247530108;NR5A1,2:-0.0922535846633;ZNF143:-0.0961818224736;ZNF238:-0.109415690439;RXR{A,B,G}:-0.115666422007;HMGA1,2:-0.141603592562;RFX2..5_RFXANK_RFXAP:-0.149603718782;MTF1:-0.174693075381;NANOG:-0.210572185092;PAX5:-0.210803102273;TOPORS:-0.212775449967;TFAP2{A,C}:-0.223485637803;SP1:-0.224398734547;ZFP161:-0.229312766628;PITX1..3:-0.230889548189;HSF1,2:-0.239630861099;NKX6-1,2:-0.249847265629;LHX3,4:-0.250094601242;ALX1:-0.264091964578;FOSL2:-0.288367494948;ATF4:-0.299349462051;FOXQ1:-0.308135105634;KLF4:-0.308639892812;LMO2:-0.316968093481;MZF1:-0.323572797201;MAZ:-0.330033559888;MED-1{core}:-0.365513489261;SOX2:-0.372066288146;EVI1:-0.372468602955;ZNF148:-0.395969414696;HNF1A:-0.418787979306;GLI1..3:-0.418940966816;PAX4:-0.420599543117;bHLH_family:-0.420836164763;EGR1..3:-0.443222081044;HES1:-0.454746247029;POU1F1:-0.462757450649;REST:-0.463773087908;ATF5_CREB3:-0.477549607362;PPARG:-0.478988843415;CRX:-0.482795072477;PATZ1:-0.485260846629;FOS_FOS{B,L1}_JUN{B,D}:-0.493592926969;ATF2:-0.517290355725;BREu{core}:-0.541479874912;AHR_ARNT_ARNT2:-0.559475555104;SOX{8,9,10}:-0.56049037557;HOX{A4,D4}:-0.573853578082;BACH2:-0.573915906221;AIRE:-0.594905116715;CREB1:-0.623027228633;NR3C1:-0.634596438655;GTF2I:-0.648969439053;ZBTB6:-0.658140128253;HIF1A:-0.663376416923;PAX3,7:-0.685653870463;ZEB1:-0.694773496594;MTE{core}:-0.702422145669;LEF1_TCF7_TCF7L1,2:-0.708117505744;NFATC1..3:-0.711366154913;TLX1..3_NFIC{dimer}:-0.723195799057;GZF1:-0.733115019578;SOX5:-0.74523274756;E2F1..5:-0.754201033652;ALX4:-0.754521372052;XBP1:-0.766708608286;SNAI1..3:-0.769354193551;XCPE1{core}:-0.77410848361;ZNF423:-0.791455060206;HOX{A5,B5}:-0.794931131344;IKZF1:-0.797007735834;MYBL2:-0.838509701337;SOX17:-0.83976622766;HIC1:-0.841743375802;HOX{A6,A7,B6,B7}:-0.846979142348;TFDP1:-0.849407168113;TFAP2B:-0.856369628977;GFI1B:-0.861395553414;MEF2{A,B,C,D}:-0.893319893444;NFY{A,B,C}:-0.90962382597;GTF2A1,2:-0.930357062249;RREB1:-0.969255816206;HOXA9_MEIS1:-1.04120832003;GFI1:-1.06048627278;UFEwm:-1.0810092918;TEAD1:-1.11838275801;FOXM1:-1.12215822174;CDC5L:-1.12435087519;GCM1,2:-1.1402323025;ATF6:-1.18217614687;POU3F1..4:-1.19418379064;NFE2L1:-1.19584404239;TBP:-1.25522821834;NR1H4:-1.27814521235;POU6F1:-1.28518271553;TP53:-1.30910989252;RFX1:-1.32932135042;POU2F1..3:-1.39291923216;SRF:-1.42509571733;NKX3-1:-1.43178705994;PBX1:-1.43516043151;NKX2-1,4:-1.56654875673;TEF:-1.65962011368;ZNF384:-1.66375362937;JUN:-1.69706289228;ONECUT1,2:-1.82674467184;FOXL1:-1.98384228776;TBX4,5:-2.06873620823;ZIC1..3:-2.20316489384 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11386-118B9;search_select_hide=table117:FF:11386-118B9 | |||
}} | }} |
Latest revision as of 17:56, 4 June 2020
Name: | CD14+ monocyte derived endothelial progenitor cells, donor3 |
---|---|
Species: | Human (Homo sapiens) |
Library ID: | CNhs11904 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Download raw sequence, BAM & CTSS | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11904
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11904
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.198 |
10 | 10 | 0.0453 |
100 | 100 | 0.738 |
101 | 101 | 0.257 |
102 | 102 | 0.714 |
103 | 103 | 0.103 |
104 | 104 | 0.93 |
105 | 105 | 0.39 |
106 | 106 | 0.136 |
107 | 107 | 0.533 |
108 | 108 | 0.862 |
109 | 109 | 0.114 |
11 | 11 | 0.144 |
110 | 110 | 0.46 |
111 | 111 | 0.0434 |
112 | 112 | 0.415 |
113 | 113 | 0.823 |
114 | 114 | 0.0451 |
115 | 115 | 0.139 |
116 | 116 | 0.968 |
117 | 117 | 0.0199 |
118 | 118 | 0.426 |
119 | 119 | 0.0378 |
12 | 12 | 0.442 |
120 | 120 | 0.431 |
121 | 121 | 0.884 |
122 | 122 | 0.253 |
123 | 123 | 0.041 |
124 | 124 | 0.234 |
125 | 125 | 0.345 |
126 | 126 | 0.0789 |
127 | 127 | 0.11 |
128 | 128 | 0.0883 |
129 | 129 | 0.957 |
13 | 13 | 0.0916 |
130 | 130 | 0.872 |
131 | 131 | 0.476 |
132 | 132 | 0.695 |
133 | 133 | 0.986 |
134 | 134 | 0.565 |
135 | 135 | 0.342 |
136 | 136 | 0.726 |
137 | 137 | 0.00869 |
138 | 138 | 0.103 |
139 | 139 | 0.0421 |
14 | 14 | 0.133 |
140 | 140 | 0.0922 |
141 | 141 | 0.619 |
142 | 142 | 0.215 |
143 | 143 | 0.454 |
144 | 144 | 0.31 |
145 | 145 | 0.402 |
146 | 146 | 0.896 |
147 | 147 | 0.216 |
148 | 148 | 0.0249 |
149 | 149 | 0.745 |
15 | 15 | 0.24 |
150 | 150 | 0.467 |
151 | 151 | 0.803 |
152 | 152 | 0.634 |
153 | 153 | 0.615 |
154 | 154 | 0.84 |
155 | 155 | 0.264 |
156 | 156 | 0.84 |
157 | 157 | 0.38 |
158 | 158 | 0.654 |
159 | 159 | 0.21 |
16 | 16 | 0.345 |
160 | 160 | 0.99 |
161 | 161 | 0.331 |
162 | 162 | 0.538 |
163 | 163 | 0.548 |
164 | 164 | 0.207 |
165 | 165 | 0.159 |
166 | 166 | 0.477 |
167 | 167 | 0.578 |
168 | 168 | 0.294 |
169 | 169 | 0.0588 |
17 | 17 | 0.382 |
18 | 18 | 0.572 |
19 | 19 | 0.255 |
2 | 2 | 0.761 |
20 | 20 | 0.955 |
21 | 21 | 0.447 |
22 | 22 | 0.126 |
23 | 23 | 0.456 |
24 | 24 | 0.0331 |
25 | 25 | 0.461 |
26 | 26 | 0.114 |
27 | 27 | 0.132 |
28 | 28 | 0.49 |
29 | 29 | 0.323 |
3 | 3 | 0.0173 |
30 | 30 | 0.703 |
31 | 31 | 0.346 |
32 | 32 | 0.86 |
33 | 33 | 0.851 |
34 | 34 | 0.268 |
35 | 35 | 0.332 |
36 | 36 | 0.251 |
37 | 37 | 0.185 |
38 | 38 | 0.103 |
39 | 39 | 0.886 |
4 | 4 | 0.827 |
40 | 40 | 0.314 |
41 | 41 | 0.144 |
42 | 42 | 0.353 |
43 | 43 | 0.1 |
44 | 44 | 0.67 |
45 | 45 | 0.448 |
46 | 46 | 0.199 |
47 | 47 | 0.517 |
48 | 48 | 0.295 |
49 | 49 | 0.136 |
5 | 5 | 0.2 |
50 | 50 | 0.682 |
51 | 51 | 0.529 |
52 | 52 | 0.275 |
53 | 53 | 0.158 |
54 | 54 | 0.359 |
55 | 55 | 0.0396 |
56 | 56 | 0.734 |
57 | 57 | 0.596 |
58 | 58 | 0.0885 |
59 | 59 | 0.116 |
6 | 6 | 0.465 |
60 | 60 | 0.0792 |
61 | 61 | 0.158 |
62 | 62 | 0.126 |
63 | 63 | 0.344 |
64 | 64 | 0.435 |
65 | 65 | 0.151 |
66 | 66 | 0.841 |
67 | 67 | 0.107 |
68 | 68 | 0.456 |
69 | 69 | 0.878 |
7 | 7 | 0.16 |
70 | 70 | 0.0393 |
71 | 71 | 0.0767 |
72 | 72 | 0.264 |
73 | 73 | 0.101 |
74 | 74 | 0.706 |
75 | 75 | 0.0339 |
76 | 76 | 0.294 |
77 | 77 | 0.286 |
78 | 78 | 0.116 |
79 | 79 | 0.437 |
8 | 8 | 0.273 |
80 | 80 | 0.138 |
81 | 81 | 0.234 |
82 | 82 | 0.0808 |
83 | 83 | 0.579 |
84 | 84 | 0.785 |
85 | 85 | 0.0507 |
86 | 86 | 0.0171 |
87 | 87 | 0.118 |
88 | 88 | 0.253 |
89 | 89 | 0.439 |
9 | 9 | 0.288 |
90 | 90 | 0.0198 |
91 | 91 | 0.868 |
92 | 92 | 0.0644 |
93 | 93 | 0.878 |
94 | 94 | 0.111 |
95 | 95 | 0.735 |
96 | 96 | 0.159 |
97 | 97 | 0.801 |
98 | 98 | 0.369 |
99 | 99 | 0.47 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11904
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
CL:0000576 monocyte
EFO:0002091 biological replicate
FF:0000248 human endothelial progenitor cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0000766 (myeloid leukocyte)
0002078 (meso-epithelial cell)
0000219 (motile cell)
0000215 (barrier cell)
0000134 (mesenchymal cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000034 (stem cell)
0000576 (monocyte)
0000115 (endothelial cell)
0000566 (angioblastic mesenchymal cell)
0002619 (adult endothelial progenitor cell)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000248 (human endothelial progenitor cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0000222 (mesodermal cell)