FF:11390-118C4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004721 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004721 | ||
|accession_numbers=CAGE;DRX008380;DRR009252;DRZ000677;DRZ002062;DRZ012027;DRZ013412 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037208;DRR041574;DRZ007216 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000081,CL:0000219,CL:0000738,CL:0000255,CL:0000094,CL:0000775 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000122 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.33!2138.80!PLEK;;chr11:47400078..47400106,-!p1@SPI1!3.27!1847.46!SPI1;;chr11:47400062..47400077,-!p2@SPI1!2.63!429.75!SPI1;;chr2:70142232..70142251,+!p1@MXD1!2.53!1797.32!MXD1;;chr7:28725715..28725727,+!p3@CREB5!2.43!314.13!CREB5;;chr11:47400032..47400043,-!p5@SPI1!2.26!179.86!SPI1;;chr7:28725740..28725778,+!p1@CREB5!2.22!1379.59!CREB5;;chr3:187463179..187463201,-!p2@BCL6!2.22!644.42!BCL6;;chr12:54694758..54694805,-!p1@NFE2!2.18!181.51!NFE2;;chr5:142782823..142782854,-!p3@NR3C1!2.15!196.02!NR3C1;;chr11:47399947..47399961,-!p3@SPI1!2.15!139.66!SPI1;;chr11:47399996..47400014,-!p4@SPI1!2.11!129.30!SPI1;;chr7:50344289..50344323,+!p1@IKZF1!2.06!114.79!IKZF1;;chr12:54694653..54694672,-!p2@NFE2!2.05!112.31!NFE2;;chr2:231090471..231090504,+!p2@SP140!2.05!110.65!SP140;;chr6:144385698..144385742,-!p2@PLAGL1!2.04!130.54!PLAGL1;;chr10:35484053..35484076,+!p1@CREM!2.03!255.28!CREM;;chr14:35872962..35873025,-!p3@NFKBIA!2.01!245.75!NFKBIA;;chr4:106068026..106068084,+!p1@TET2!1.97!773.71!TET2;;chr11:47400045..47400060,-!p6@SPI1!1.97!92.00!SPI1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.95!89.10!ZBED1;;chr10:51572408..51572454,+!p3@NCOA4!1.94!472.43!NCOA4;;chr7:149470641..149470694,-!p1@ZNF467!1.92!351.01!ZNF467;;chr19:45250948..45250998,+!p3@BCL3!1.91!197.26!BCL3;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.91!127.23!PCBP2;;chr19:45251395..45251432,+!p8@BCL3!1.90!78.74!BCL3;;chr3:39195075..39195088,-!p1@CSRNP1!1.88!443.84!CSRNP1;;chr19:45252008..45252024,+!p2@BCL3!1.88!238.70!BCL3;;chr19:36391434..36391450,-!p1@NFKBID!1.85!134.27!NFKBID;;chr10:31288398..31288455,-!p2@ZNF438!1.85!81.64!ZNF438;;chr2:157189180..157189290,-!p1@NR4A2!1.83!333.60!NR4A2;;chr2:70166258..70166288,+!p5@MXD1!1.83!67.14!MXD1;;chr14:35872453..35872485,-!p2@NFKBIA!1.82!154.58!NFKBIA;;chr9:88969339..88969422,-!p2@ZCCHC6!1.81!466.63!ZCCHC6;;chr3:187463220..187463232,-!p3@BCL6!1.81!184.83!BCL6;;chr3:39195037..39195069,-!p2@CSRNP1!1.80!363.86!CSRNP1;;chr2:231090433..231090469,+!p1@SP140!1.80!62.16!SP140;;chr2:70142189..70142223,+!p2@MXD1!1.79!411.93!MXD1;;chr9:102584262..102584276,+!p1@NR4A3!1.79!130.54!NR4A3;;chr12:54694807..54694832,-!p3@NFE2!1.77!58.43!NFE2;;chr8:123793988..123794016,+!p1@ZHX2!1.76!96.56!ZHX2;;chr16:31885093..31885165,+!p1@ZNF267!1.75!798.99!ZNF267;;chr3:101568349..101568365,+!p1@NFKBIZ!1.74!2608.75!NFKBIZ;;chr14:35873947..35873965,-!p1@NFKBIA!1.73!3141.68!NFKBIA;;chr2:208031943..208031978,-!p5@KLF7!1.73!69.62!KLF7;;chr7:50343634..50343717,+!p2@IKZF1!1.72!51.80!IKZF1;;chr2:231084659..231084721,-!p1@SP110!1.71!1100.27!SP110;;chr2:68592394..68592405,+!p2@PLEK!1.71!50.14!PLEK;;chr8:22550982..22550999,-!p1@EGR3!1.70!133.03!EGR3;;chr2:231084639..231084654,-!p2@SP110!1.70!79.57!SP110;;chr2:28618532..28618610,+!p4@FOSL2!1.69!81.23!FOSL2;;chr1:156470515..156470542,-!p2@MEF2D!1.67!228.76!MEF2D;;chr9:102584241..102584261,+!p4@NR4A3!1.65!65.89!NR4A3;;chr17:38497662..38497713,+!p4@RARA!1.65!50.56!RARA;;chr9:94186101..94186122,-!p1@NFIL3!1.64!563.19!NFIL3;;chr4:140098339..140098392,-!p1@ELF2!1.64!333.19!ELF2;;chr5:176735063..176735088,-!p2@MXD3!1.64!43.10!MXD3;;chr5:131826457..131826514,-!p1@IRF1!1.63!1535.00!IRF1;;chr19:45251943..45252006,+!p1@BCL3!1.63!1044.33!BCL3;;chr4:185395633..185395651,-!p2@IRF2!1.63!65.48!IRF2;;chr17:38498402..38498445,+!p3@RARA!1.62!142.56!RARA;;chr9:88969303..88969335,-!p1@ZCCHC6!1.61!354.33!ZCCHC6;;chr14:35872926..35872951,-!p4@NFKBIA!1.61!55.12!NFKBIA;;chr2:61108695..61108753,+!p1@REL!1.60!255.28!REL;;chr13:41593425..41593480,-!p1@ELF1!1.60!237.87!ELF1;;chr10:104154415..104154434,+!p5@NFKB2!1.60!38.96!NFKB2;;chr20:56195474..56195506,-!p1@ZBP1!1.59!38.13!ZBP1;;chr3:187463248..187463264,-!p1@BCL6!1.58!757.55!BCL6;;chr4:103422499..103422632,+!p1@NFKB1!1.58!727.30!NFKB1;;chr6:44355499..44355514,+!p3@CDC5L!1.58!40.61!CDC5L;;chr2:70165961..70165981,+!p8@MXD1!1.58!36.88!MXD1;;chr9:102584128..102584144,+!p3@NR4A3!1.57!67.55!NR4A3;;chr1:8484007..8484061,-!p13@RERE!1.56!44.34!RERE;;chr6:12011943..12012015,+!p2@HIVEP1!1.54!105.26!HIVEP1;;chr3:63898321..63898396,+!p3@ATXN7!1.54!74.59!ATXN7;;chr9:94186085..94186096,-!p3@NFIL3!1.53!53.05!NFIL3;;chr10:104154246..104154347,+!p3@NFKB2!1.52!186.90!NFKB2;;chr17:38498594..38498661,+!p2@RARA!1.52!104.85!RARA;;chr9:32550965..32551031,-!p4@TOPORS!1.52!48.90!TOPORS;;chr10:104155659..104155676,+!p4@NFKB2!1.51!38.96!NFKB2;;chr5:142782862..142782881,-!p11@NR3C1!1.51!31.50!NR3C1;;chr14:75745523..75745537,+!p1@FOS!1.50!3442.14!FOS;;chr6:12012170..12012245,+!p1@HIVEP1!1.50!146.70!HIVEP1;;chr13:72441315..72441454,-!p1@DACH1!1.50!60.50!DACH1;;chr10:104155480..104155534,+!p2@NFKB2!1.49!188.14!NFKB2;;chr7:64126535..64126559,+!p2@ZNF107!1.49!61.75!ZNF107;;chr2:61108808..61108821,+!p3@REL!1.49!37.71!REL;;chr10:31288370..31288393,-!p3@ZNF438!1.49!30.25!ZNF438;;chr3:128212033..128212051,-!p1@GATA2!1.49!29.84!GATA2;;chr6:44233252..44233296,-!p1@NFKBIE!1.48!276.42!NFKBIE;;chr9:117150254..117150271,-!p1@AKNA!1.48!77.08!AKNA;;chr10:51572339..51572376,+!p4@NCOA4!1.48!64.23!NCOA4;;chr4:83822246..83822277,+!p5@THAP9!1.48!29.01!THAP9;;chrX:106960180..106960197,-!p2@TSC22D3!1.47!104.85!TSC22D3;;chr20:48807171..48807234,+!p4@CEBPB!1.47!61.33!CEBPB;;chr4:185395191..185395226,-!p4@IRF2!1.47!39.78!IRF2;;chr9:94173455..94173468,-!p4@NFIL3!1.47!28.59!NFIL3;;chr19:12902289..12902307,+!p1@JUNB!1.45!5891.75!JUNB;;chr4:38665769..38665801,+!p2@KLF3!1.45!238.29!KLF3;;chr6:15249128..15249177,+!p4@JARID2!1.45!48.07!JARID2;;chr2:61108771..61108789,+!p4@REL!1.45!40.61!REL;;chr1:67395833..67395851,+!p8@MIER1!1.45!32.74!MIER1;;chr8:71316021..71316068,-!p1@NCOA2!1.44!238.70!NCOA2;;chr6:15246200..15246214,+!p2@JARID2!1.44!71.69!JARID2;;chr1:221052733..221052749,+!p2@HLX!1.44!33.98!HLX;;chr1:221052776..221052799,+!p1@HLX!1.42!44.76!HLX;;chr2:61108878..61108891,+!p5@REL!1.42!25.28!REL;;chr5:172483347..172483407,+!p1@C5orf41!1.41!177.78!CREBRF;;chr4:83822199..83822239,+!p2@THAP9!1.41!29.42!THAP9;;chr10:35484090..35484104,+!p6@CREM!1.41!24.86!CREM;;chr11:128563948..128564003,+!p1@FLI1!1.40!277.24!FLI1;;chr1:158979872..158979898,+!p3@IFI16!1.40!72.11!IFI16;;chr1:156470494..156470505,-!p3@MEF2D!1.40!34.40!MEF2D;;chr9:127533519..127533573,-!p2@NR6A1!1.40!29.01!NR6A1;;chr10:51585449..51585487,+!p6@NCOA4!1.40!24.04!NCOA4;;chr21:30671235..30671253,+!p1@BACH1!1.39!288.02!BACH1;;chr7:106809470..106809481,+!p2@HBP1!1.39!32.74!HBP1;;chr2:174828545..174828644,-!p1@SP3!1.38!339.41!SP3;;chr2:97202480..97202499,+!p1@ARID5A!1.38!227.10!ARID5A;;chr10:3827371..3827386,-!p2@KLF6!1.38!187.32!KLF6;;chr17:38487239..38487261,+!p12@RARA!1.38!23.21!RARA;;chr3:39195139..39195150,-!p3@CSRNP1!1.37!28.59!CSRNP1;;chr19:45504688..45504782,+!p1@RELB!1.36!127.64!RELB;;chr1:247095162..247095173,-!p3@AHCTF1!1.36!33.57!AHCTF1;;chr7:149470540..149470596,-!p2@ZNF467!1.36!28.59!ZNF467;;chr2:70166156..70166179,+!p4@MXD1!1.36!21.96!MXD1;;chr12:8205566..8205581,+!p8@FOXJ2!1.36!21.96!FOXJ2;;chr19:45257891..45257908,+!p17@BCL3!1.36!21.96!BCL3;;chr9:117160738..117160782,-!p2@AKNA!1.35!86.20!AKNA;;chr21:30671189..30671207,+!p4@BACH1!1.35!73.35!BACH1;;chr16:3313791..3313834,+!p2@ZNF263!1.35!47.24!ZNF263;;chr19:47616992..47617011,-!p4@ZC3H4!1.35!44.76!ZC3H4;;chr1:67395855..67395872,+!p5@MIER1!1.35!32.32!MIER1;;chr4:103422811..103422822,+!p11@NFKB1!1.35!21.55!NFKB1;;chr20:48807351..48807384,+!p1@CEBPB!1.34!2046.38!CEBPB;;chr19:21688458..21688467,+!p3@ZNF429!1.34!20.72!ZNF429;;chr19:36389839..36389857,-!p4@NFKBID!1.34!20.72!NFKBID;;chr5:172483414..172483425,+!p3@C5orf41!1.33!20.31!CREBRF;;chr1:235491462..235491510,-!p1@ARID4B!1.32!345.62!ARID4B;;chr17:40428359..40428462,-!p1@STAT5B!1.32!248.65!STAT5B;;chr21:36421535..36421610,-!p2@RUNX1!1.32!68.79!RUNX1;;chr21:30671690..30671762,+!p2@BACH1!1.32!66.31!BACH1;;chr4:81104895..81104920,+!p2@PRDM8!1.32!29.42!PRDM8;;chrX:129244454..129244488,-!p1@ELF4!1.31!135.93!ELF4;;chr6:108882109..108882173,+!p2@FOXO3!1.31!102.78!FOXO3;;chr21:30671211..30671234,+!p3@BACH1!1.31!91.17!BACH1;;chr6:15245677..15245723,+!p6@JARID2!1.31!28.59!JARID2;;chr2:231077626..231077651,-!p6@SP110!1.31!24.86!SP110;;chrX:129244430..129244442,-!p5@ELF4!1.31!19.48!ELF4;;chr19:16435625..16435682,+!p1@KLF2!1.30!589.30!KLF2;;chr10:51565239..51565263,+!p2@NCOA4!1.30!433.48!NCOA4;;chr2:145277640..145277771,-!p1@ZEB2!1.30!246.16!ZEB2;;chr2:208031542..208031595,-!p2@KLF7!1.30!130.96!KLF7;;chr3:113415441..113415500,-!p1@KIAA2018!1.30!101.95!KIAA2018;;chr14:58765305..58765324,+!p4@ARID4A!1.30!23.62!ARID4A;;chr12:54694738..54694749,-!p5@NFE2!1.30!19.06!NFE2;;chr10:114709999..114710031,+!p1@TCF7L2!1.29!425.60!TCF7L2;;chr4:87928413..87928433,+!p3@AFF1!1.29!112.31!AFF1;;chr1:38325227..38325246,-!p2@MTF1!1.29!25.28!MTF1;;chr11:13299319..13299424,+!p1@ARNTL!1.28!179.03!ARNTL;;chr4:185395590..185395627,-!p3@IRF2!1.28!22.38!IRF2;;chr1:151030536..151030549,+!p8@MLLT11!1.28!18.23!MLLT11;;chr12:48298785..48298828,-!p1@VDR!1.27!90.76!VDR;;chr12:11802753..11802834,+!p2@ETV6!1.27!84.96!ETV6;;chr6:45390343..45390388,+!p10@RUNX2!1.27!24.04!RUNX2;;chr6:15246261..15246312,+!p1@JARID2!1.26!401.98!JARID2;;chr14:58765217..58765301,+!p1@ARID4A!1.26!152.92!ARID4A;;chr5:142784003..142784065,-!p2@NR3C1!1.26!139.24!NR3C1;;chr9:137217986..137218049,+!p3@RXRA!1.26!48.49!RXRA;;chr6:106534230..106534254,+!p2@PRDM1!1.26!43.10!PRDM1;;chr1:154975110..154975149,+!p2@ZBTB7B!1.26!36.05!ZBTB7B;;chr1:25256756..25256774,-!p1@RUNX3!1.26!32.32!RUNX3;;chr10:31288329..31288353,-!p7@ZNF438!1.26!17.41!ZNF438;;chr13:72440901..72440968,-!p4@DACH1!1.26!16.99!DACH1;;chr21:40177892..40177903,+!p2@ETS2!1.25!65.89!ETS2;;chr4:81118647..81118666,+!p1@PRDM8!1.25!21.96!PRDM8;;chr19:12405606..12405629,-!p2@ZNF44!1.24!31.91!ZNF44;;chr7:104654718..104654741,+!p3@MLL5!1.24!24.04!MLL5;;chr7:28725585..28725608,+!p11@CREB5!1.24!16.58!CREB5;;chr9:117138946..117138968,-!p4@AKNA!1.24!16.58!AKNA;;chr1:247095194..247095235,-!p1@AHCTF1!1.23!164.52!AHCTF1;;chr3:129158715..129158766,-!p2@MBD4!1.23!152.09!MBD4;;chr2:238600933..238600985,+!p3@LRRFIP1!1.23!84.54!LRRFIP1;;chr19:19496577..194966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| |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.33!2138.80!PLEK;;chr11:47400078..47400106,-!p1@SPI1!3.27!1847.46!SPI1;;chr11:47400062..47400077,-!p2@SPI1!2.63!429.75!SPI1;;chr2:70142232..70142251,+!p1@MXD1!2.53!1797.32!MXD1;;chr7:28725715..28725727,+!p3@CREB5!2.43!314.13!CREB5;;chr11:47400032..47400043,-!p5@SPI1!2.26!179.86!SPI1;;chr7:28725740..28725778,+!p1@CREB5!2.22!1379.59!CREB5;;chr3:187463179..187463201,-!p2@BCL6!2.22!644.42!BCL6;;chr12:54694758..54694805,-!p1@NFE2!2.18!181.51!NFE2;;chr5:142782823..142782854,-!p3@NR3C1!2.15!196.02!NR3C1;;chr11:47399947..47399961,-!p3@SPI1!2.15!139.66!SPI1;;chr11:47399996..47400014,-!p4@SPI1!2.11!129.30!SPI1;;chr7:50344289..50344323,+!p1@IKZF1!2.06!114.79!IKZF1;;chr12:54694653..54694672,-!p2@NFE2!2.05!112.31!NFE2;;chr2:231090471..231090504,+!p2@SP140!2.05!110.65!SP140;;chr6:144385698..144385742,-!p2@PLAGL1!2.04!130.54!PLAGL1;;chr10:35484053..35484076,+!p1@CREM!2.03!255.28!CREM;;chr14:35872962..35873025,-!p3@NFKBIA!2.01!245.75!NFKBIA;;chr4:106068026..106068084,+!p1@TET2!1.97!773.71!TET2;;chr11:47400045..47400060,-!p6@SPI1!1.97!92.00!SPI1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.95!89.10!ZBED1;;chr10:51572408..51572454,+!p3@NCOA4!1.94!472.43!NCOA4;;chr7:149470641..149470694,-!p1@ZNF467!1.92!351.01!ZNF467;;chr19:45250948..45250998,+!p3@BCL3!1.91!197.26!BCL3;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.91!127.23!PCBP2;;chr19:45251395..45251432,+!p8@BCL3!1.90!78.74!BCL3;;chr3:39195075..39195088,-!p1@CSRNP1!1.88!443.84!CSRNP1;;chr19:45252008..45252024,+!p2@BCL3!1.88!238.70!BCL3;;chr19:36391434..36391450,-!p1@NFKBID!1.85!134.27!NFKBID;;chr10:31288398..31288455,-!p2@ZNF438!1.85!81.64!ZNF438;;chr2:157189180..157189290,-!p1@NR4A2!1.83!333.60!NR4A2;;chr2:70166258..70166288,+!p5@MXD1!1.83!67.14!MXD1;;chr14:35872453..35872485,-!p2@NFKBIA!1.82!154.58!NFKBIA;;chr9:88969339..88969422,-!p2@ZCCHC6!1.81!466.63!ZCCHC6;;chr3:187463220..187463232,-!p3@BCL6!1.81!184.83!BCL6;;chr3:39195037..39195069,-!p2@CSRNP1!1.80!363.86!CSRNP1;;chr2:231090433..231090469,+!p1@SP140!1.80!62.16!SP140;;chr2:70142189..70142223,+!p2@MXD1!1.79!411.93!MXD1;;chr9:102584262..102584276,+!p1@NR4A3!1.79!130.54!NR4A3;;chr12:54694807..54694832,-!p3@NFE2!1.77!58.43!NFE2;;chr8:123793988..123794016,+!p1@ZHX2!1.76!96.56!ZHX2;;chr16:31885093..31885165,+!p1@ZNF267!1.75!798.99!ZNF267;;chr3:101568349..101568365,+!p1@NFKBIZ!1.74!2608.75!NFKBIZ;;chr14:35873947..35873965,-!p1@NFKBIA!1.73!3141.68!NFKBIA;;chr2:208031943..208031978,-!p5@KLF7!1.73!69.62!KLF7;;chr7:50343634..50343717,+!p2@IKZF1!1.72!51.80!IKZF1;;chr2:231084659..231084721,-!p1@SP110!1.71!1100.27!SP110;;chr2:68592394..68592405,+!p2@PLEK!1.71!50.14!PLEK;;chr8:22550982..22550999,-!p1@EGR3!1.70!133.03!EGR3;;chr2:231084639..231084654,-!p2@SP110!1.70!79.57!SP110;;chr2:28618532..28618610,+!p4@FOSL2!1.69!81.23!FOSL2;;chr1:156470515..156470542,-!p2@MEF2D!1.67!228.76!MEF2D;;chr9:102584241..102584261,+!p4@NR4A3!1.65!65.89!NR4A3;;chr17:38497662..38497713,+!p4@RARA!1.65!50.56!RARA;;chr9:94186101..94186122,-!p1@NFIL3!1.64!563.19!NFIL3;;chr4:140098339..140098392,-!p1@ELF2!1.64!333.19!ELF2;;chr5:176735063..176735088,-!p2@MXD3!1.64!43.10!MXD3;;chr5:131826457..131826514,-!p1@IRF1!1.63!1535.00!IRF1;;chr19:45251943..45252006,+!p1@BCL3!1.63!1044.33!BCL3;;chr4:185395633..185395651,-!p2@IRF2!1.63!65.48!IRF2;;chr17:38498402..38498445,+!p3@RARA!1.62!142.56!RARA;;chr9:88969303..88969335,-!p1@ZCCHC6!1.61!354.33!ZCCHC6;;chr14:35872926..35872951,-!p4@NFKBIA!1.61!55.12!NFKBIA;;chr2:61108695..61108753,+!p1@REL!1.60!255.28!REL;;chr13:41593425..41593480,-!p1@ELF1!1.60!237.87!ELF1;;chr10:104154415..104154434,+!p5@NFKB2!1.60!38.96!NFKB2;;chr20:56195474..56195506,-!p1@ZBP1!1.59!38.13!ZBP1;;chr3:187463248..187463264,-!p1@BCL6!1.58!757.55!BCL6;;chr4:103422499..103422632,+!p1@NFKB1!1.58!727.30!NFKB1;;chr6:44355499..44355514,+!p3@CDC5L!1.58!40.61!CDC5L;;chr2:70165961..70165981,+!p8@MXD1!1.58!36.88!MXD1;;chr9:102584128..102584144,+!p3@NR4A3!1.57!67.55!NR4A3;;chr1:8484007..8484061,-!p13@RERE!1.56!44.34!RERE;;chr6:12011943..12012015,+!p2@HIVEP1!1.54!105.26!HIVEP1;;chr3:63898321..63898396,+!p3@ATXN7!1.54!74.59!ATXN7;;chr9:94186085..94186096,-!p3@NFIL3!1.53!53.05!NFIL3;;chr10:104154246..104154347,+!p3@NFKB2!1.52!186.90!NFKB2;;chr17:38498594..38498661,+!p2@RARA!1.52!104.85!RARA;;chr9:32550965..32551031,-!p4@TOPORS!1.52!48.90!TOPORS;;chr10:104155659..104155676,+!p4@NFKB2!1.51!38.96!NFKB2;;chr5:142782862..142782881,-!p11@NR3C1!1.51!31.50!NR3C1;;chr14:75745523..75745537,+!p1@FOS!1.50!3442.14!FOS;;chr6:12012170..12012245,+!p1@HIVEP1!1.50!146.70!HIVEP1;;chr13:72441315..72441454,-!p1@DACH1!1.50!60.50!DACH1;;chr10:104155480..104155534,+!p2@NFKB2!1.49!188.14!NFKB2;;chr7:64126535..64126559,+!p2@ZNF107!1.49!61.75!ZNF107;;chr2:61108808..61108821,+!p3@REL!1.49!37.71!REL;;chr10:31288370..31288393,-!p3@ZNF438!1.49!30.25!ZNF438;;chr3:128212033..128212051,-!p1@GATA2!1.49!29.84!GATA2;;chr6:44233252..44233296,-!p1@NFKBIE!1.48!276.42!NFKBIE;;chr9:117150254..117150271,-!p1@AKNA!1.48!77.08!AKNA;;chr10:51572339..51572376,+!p4@NCOA4!1.48!64.23!NCOA4;;chr4:83822246..83822277,+!p5@THAP9!1.48!29.01!THAP9;;chrX:106960180..106960197,-!p2@TSC22D3!1.47!104.85!TSC22D3;;chr20:48807171..48807234,+!p4@CEBPB!1.47!61.33!CEBPB;;chr4:185395191..185395226,-!p4@IRF2!1.47!39.78!IRF2;;chr9:94173455..94173468,-!p4@NFIL3!1.47!28.59!NFIL3;;chr19:12902289..12902307,+!p1@JUNB!1.45!5891.75!JUNB;;chr4:38665769..38665801,+!p2@KLF3!1.45!238.29!KLF3;;chr6:15249128..15249177,+!p4@JARID2!1.45!48.07!JARID2;;chr2:61108771..61108789,+!p4@REL!1.45!40.61!REL;;chr1:67395833..67395851,+!p8@MIER1!1.45!32.74!MIER1;;chr8:71316021..71316068,-!p1@NCOA2!1.44!238.70!NCOA2;;chr6:15246200..15246214,+!p2@JARID2!1.44!71.69!JARID2;;chr1:221052733..221052749,+!p2@HLX!1.44!33.98!HLX;;chr1:221052776..221052799,+!p1@HLX!1.42!44.76!HLX;;chr2:61108878..61108891,+!p5@REL!1.42!25.28!REL;;chr5:172483347..172483407,+!p1@C5orf41!1.41!177.78!CREBRF;;chr4:83822199..83822239,+!p2@THAP9!1.41!29.42!THAP9;;chr10:35484090..35484104,+!p6@CREM!1.41!24.86!CREM;;chr11:128563948..128564003,+!p1@FLI1!1.40!277.24!FLI1;;chr1:158979872..158979898,+!p3@IFI16!1.40!72.11!IFI16;;chr1:156470494..156470505,-!p3@MEF2D!1.40!34.40!MEF2D;;chr9:127533519..127533573,-!p2@NR6A1!1.40!29.01!NR6A1;;chr10:51585449..51585487,+!p6@NCOA4!1.40!24.04!NCOA4;;chr21:30671235..30671253,+!p1@BACH1!1.39!288.02!BACH1;;chr7:106809470..106809481,+!p2@HBP1!1.39!32.74!HBP1;;chr2:174828545..174828644,-!p1@SP3!1.38!339.41!SP3;;chr2:97202480..97202499,+!p1@ARID5A!1.38!227.10!ARID5A;;chr10:3827371..3827386,-!p2@KLF6!1.38!187.32!KLF6;;chr17:38487239..38487261,+!p12@RARA!1.38!23.21!RARA;;chr3:39195139..39195150,-!p3@CSRNP1!1.37!28.59!CSRNP1;;chr19:45504688..45504782,+!p1@RELB!1.36!127.64!RELB;;chr1:247095162..247095173,-!p3@AHCTF1!1.36!33.57!AHCTF1;;chr7:149470540..149470596,-!p2@ZNF467!1.36!28.59!ZNF467;;chr2:70166156..70166179,+!p4@MXD1!1.36!21.96!MXD1;;chr12:8205566..8205581,+!p8@FOXJ2!1.36!21.96!FOXJ2;;chr19:45257891..45257908,+!p17@BCL3!1.36!21.96!BCL3;;chr9:117160738..117160782,-!p2@AKNA!1.35!86.20!AKNA;;chr21:30671189..30671207,+!p4@BACH1!1.35!73.35!BACH1;;chr16:3313791..3313834,+!p2@ZNF263!1.35!47.24!ZNF263;;chr19:47616992..47617011,-!p4@ZC3H4!1.35!44.76!ZC3H4;;chr1:67395855..67395872,+!p5@MIER1!1.35!32.32!MIER1;;chr4:103422811..103422822,+!p11@NFKB1!1.35!21.55!NFKB1;;chr20:48807351..48807384,+!p1@CEBPB!1.34!2046.38!CEBPB;;chr19:21688458..21688467,+!p3@ZNF429!1.34!20.72!ZNF429;;chr19:36389839..36389857,-!p4@NFKBID!1.34!20.72!NFKBID;;chr5:172483414..172483425,+!p3@C5orf41!1.33!20.31!CREBRF;;chr1:235491462..235491510,-!p1@ARID4B!1.32!345.62!ARID4B;;chr17:40428359..40428462,-!p1@STAT5B!1.32!248.65!STAT5B;;chr21:36421535..36421610,-!p2@RUNX1!1.32!68.79!RUNX1;;chr21:30671690..30671762,+!p2@BACH1!1.32!66.31!BACH1;;chr4:81104895..81104920,+!p2@PRDM8!1.32!29.42!PRDM8;;chrX:129244454..129244488,-!p1@ELF4!1.31!135.93!ELF4;;chr6:108882109..108882173,+!p2@FOXO3!1.31!102.78!FOXO3;;chr21:30671211..30671234,+!p3@BACH1!1.31!91.17!BACH1;;chr6:15245677..15245723,+!p6@JARID2!1.31!28.59!JARID2;;chr2:231077626..231077651,-!p6@SP110!1.31!24.86!SP110;;chrX:129244430..129244442,-!p5@ELF4!1.31!19.48!ELF4;;chr19:16435625..16435682,+!p1@KLF2!1.30!589.30!KLF2;;chr10:51565239..51565263,+!p2@NCOA4!1.30!433.48!NCOA4;;chr2:145277640..145277771,-!p1@ZEB2!1.30!246.16!ZEB2;;chr2:208031542..208031595,-!p2@KLF7!1.30!130.96!KLF7;;chr3:113415441..113415500,-!p1@KIAA2018!1.30!101.95!KIAA2018;;chr14:58765305..58765324,+!p4@ARID4A!1.30!23.62!ARID4A;;chr12:54694738..54694749,-!p5@NFE2!1.30!19.06!NFE2;;chr10:114709999..114710031,+!p1@TCF7L2!1.29!425.60!TCF7L2;;chr4:87928413..87928433,+!p3@AFF1!1.29!112.31!AFF1;;chr1:38325227..38325246,-!p2@MTF1!1.29!25.28!MTF1;;chr11:13299319..13299424,+!p1@ARNTL!1.28!179.03!ARNTL;;chr4:185395590..185395627,-!p3@IRF2!1.28!22.38!IRF2;;chr1:151030536..151030549,+!p8@MLLT11!1.28!18.23!MLLT11;;chr12:48298785..48298828,-!p1@VDR!1.27!90.76!VDR;;chr12:11802753..11802834,+!p2@ETV6!1.27!84.96!ETV6;;chr6:45390343..45390388,+!p10@RUNX2!1.27!24.04!RUNX2;;chr6:15246261..15246312,+!p1@JARID2!1.26!401.98!JARID2;;chr14:58765217..58765301,+!p1@ARID4A!1.26!152.92!ARID4A;;chr5:142784003..142784065,-!p2@NR3C1!1.26!139.24!NR3C1;;chr9:137217986..137218049,+!p3@RXRA!1.26!48.49!RXRA;;chr6:106534230..106534254,+!p2@PRDM1!1.26!43.10!PRDM1;;chr1:154975110..154975149,+!p2@ZBTB7B!1.26!36.05!ZBTB7B;;chr1:25256756..25256774,-!p1@RUNX3!1.26!32.32!RUNX3;;chr10:31288329..31288353,-!p7@ZNF438!1.26!17.41!ZNF438;;chr13:72440901..72440968,-!p4@DACH1!1.26!16.99!DACH1;;chr21:40177892..40177903,+!p2@ETS2!1.25!65.89!ETS2;;chr4:81118647..81118666,+!p1@PRDM8!1.25!21.96!PRDM8;;chr19:12405606..12405629,-!p2@ZNF44!1.24!31.91!ZNF44;;chr7:104654718..104654741,+!p3@MLL5!1.24!24.04!MLL5;;chr7:28725585..28725608,+!p11@CREB5!1.24!16.58!CREB5;;chr9:117138946..117138968,-!p4@AKNA!1.24!16.58!AKNA;;chr1:247095194..247095235,-!p1@AHCTF1!1.23!164.52!AHCTF1;;chr3:129158715..129158766,-!p2@MBD4!1.23!152.09!MBD4;;chr2:238600933..238600985,+!p3@LRRFIP1!1.23!84.54!LRRFIP1;;chr19:19496577..194966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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000094;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000775;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Neutrophils%252c%2520donor3.CNhs11905.11390-118C4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Neutrophils%252c%2520donor3.CNhs11905.11390-118C4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Neutrophils%252c%2520donor3.CNhs11905.11390-118C4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Neutrophils%252c%2520donor3.CNhs11905.11390-118C4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Neutrophils%252c%2520donor3.CNhs11905.11390-118C4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11390-118C4 | |id=FF:11390-118C4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000122 | ||
|is_obsolete= | |||
|library_id=CNhs11905 | |||
|library_id_phase_based=2:CNhs11905 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11390 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10013.CAGATC.11390 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11390 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10013.CAGATC.11390 | |||
|name=Neutrophils, donor3 | |name=Neutrophils, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11905,LSID834,release010,COMPLETED | |profile_hcage=CNhs11905,LSID834,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10013,,, | |profile_srnaseq=SRhi10013,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.075288505537948,0,0,0,0.150577011075896,0.430847743972186,0,0.397475100656696,0.165366509854538,0,0,0,0,0,0,0,0,0,0,0.882561432349354,0,0,-0.00274599927253141,0,0,0,0,0,0.537055523205574,0,0,0.017620421297034,0,0,0,0,0,0.2711944038149,0,0.150577011075896,0,0,0,0,0.0655181055341713,0.150577011075896,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.85831052943487,0,-0.0532050518615219,0,0.577844871607605,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0.350877006624175,0,1.31127755243584,0,0,1.15415900705741,0,0,0,0,0,0,0,0.0173029688204811,0,0,-0.552571649267773,0,0,0,-0.20323607588649,0.0010524750873285,0,0,0.452764744341098,0,-0.0980353512377064,0.0737726769823015,0,0,0,0,0,0.511246287377905,0.150577011075896,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.189880891567194,0.446663399305163,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0.5423888076298,0,0,0,0,0,0,-0.247178875285564,0,0.72782843135946,0.207361864100703,0.175438503312087,0.5423888076298,-0.296192296360283,0,0,0,0,0.424499755566394,0,0.150577011075896,0.262173581098575,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,0,0.285693543160165,0,0.181398967504212,-0.0683442610773682,0,0,0,0,-0.270240669334324,0,1.16319650864271,-0.0827201683234173,0,-0.547640234685691,0.758519568931002,0,0,0,-0.430749452727485,-0.273415783605824,0,0,-0.121779851751874,0.136157091176156,0,0,-0.391044581551635,0,0.0855216739323207,-0.188428308485383,0,-0.36577122580328,0.150577011075896,0,0,0,0,0,0,0,0,0,0,0.148881829265799,-0.326988596678969,0.150577011075896,0,0,0,-0.123661225565719,0,0,-0.373286155956567,-0.350736013296859,0,-0.9241951806468,0,1.40640731765112,0.124428571111062,0.359899250524067,-0.20323607588649,-0.147401849371139,-0.189981719549847,0,-0.559521933659011,-0.635695618038115,-0.00165522569368528,0.242445686065843,-0.406916729574555,-1.2314085082871,-0.40634161490106,0,0,0,0.98714809549735,0,0,-0.490114714476774,0.406613253193851,-0.67098743647571,0.57086192209012,-0.475939711769281,-0.225021957685574,-0.0395325284566706,-0.306859441820699,-0.15877865329601,-0.4215723249037,0,0.635013419473632,0,-0.0420118584407915,-0.435035100483148,1.47203948900976,-0.0478145557549344,1.14803383568929,-0.0683442610773682,0,-0.198310060626559,-0.0949133011788217,0,0,0.562574726406364,0,0,0.150577011075896,0,0,-0.778530175345811,0.725454333981198,0.735081152683878,0,-0.145944020511228,-0.118591230717529,0.25296181767997,0,0.540001118411754,-0.202170761610805,0.262425491949761,-0.165319662150876,0,-0.512955441385337,0.631847395024521,-0.164990696339003,-0.422394805391737,-0.0584468268118252,0.715707964190277,0.314111923005481,-0.728943533092965,-0.301507687749423,-0.124307696593413,-0.0881268324752877,0,-0.732967739442484,1.37634261342064,0,-0.33981381570917,0,0.114384844117169,0,0.363186721382227,0.0394367182569715,0.532745190255607,-0.389856740397344,0.68886635608418,0.798543150735674,0,-0.582416096993481,-0.637553926698078,0,-0.27238437317198,0,0,-0.150367083334639,-0.697695966512583,-0.061073416788693,0.19842915974591,-0.00482387574377574,-0.790080158389657,0,0,-0.081171985057703,0.115400968859786,0,0.507296917256132,0.51895281645147,0.301313447486903,0.0346059376409622,0.150577011075896,0.150577011075896,-0.645700337992725,0,0,-0.60592806381803,-0.0636048451378017,-0.469206312882737,-0.253326341486756,0,-0.108622809454255,0,0,0.364861041664624,0.262173581098575,0.6002521852128,0,0.711314057307443,-0.249881296598824,-0.116628112990133,0,0.212249877783197,0,0,0,0,0,0,0,0,0,-0.112037461216849,-0.354833330216448,0.150577011075896,0.152111297610004,0,0.350877006624175,0,0,0,0.376629095910528,0,0,-1.3301572577211,-0.0405793422855208,-0.12301741567642,0,0,0,0,-0.215723402553475,0.147640444529451,0.150577011075896,0.219014300126543,0,0,0,0,0.338358765777182,0,0,0,0,0.36676929851273,0.136944773691238,0.5423888076298,0,0,0.147545353964603,0,0,0,0,0.759366641776024,0,0,-0.481353162310484,0,0.846744233108917,0.0689951315290548,0,0.221992167532944,0.780762876426134,-1.04744675954989,0,0,0.571277823465685,0,0,-1.03594432163325,0,0,0,0,0,0.243716088520401,0,0,0.905529488682197,-0.0637375013238594,0,0,0,0,0,0.67483723285021,0,0,0,0,0,0.100422745509708,-0.0922240566585104,0,0,0,0,0,0,0,-0.0241060230789031,-0.409487040109238,0,0,0,0,0,0.350877006624175,0,0,0.273537190123823,0,0,0,0,0,0.577844871607605,0,0.424499755566394,0.150577011075896,0.150577011075896,0.180156008633181,0,0.424499755566394,0.397475100656696,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,0.491657033371822,0,0,0,0,0,0,0,-0.124256287130194,0,0.150577011075896,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,0.430847743972186,0,0.150577011075896,0,0,0,0,0.075288505537948,0,0,0,0,0,0,0,0,0,0.150577011075896,0.075288505537948,0,0,0,-0.669248886554414,0.124654118321266,0.0250195962732217,0,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0.150577011075896,0.463384259805226,0,0,0,0,0,0,0,0,0.94811427366269,0,0,0,-0.061367927484915,0,0,0,0,0,0,0,0.537055523205574,0,0,0.11434248628671,0,0,0,0,0,0,-0.112538337344622,-0.283220399823148,-0.193946678809464,0,0,0,0.301271456171266,0.85831052943487,0,-0.191373189669808,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0.770667987811303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00274599927253141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776191508534557,0.075288505537948,0,0.075288505537948,0,0,0,0,0.172363932811819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150577011075896,0.0705585428072578,0,0,0,0.96560667834665,0,0,0,0,0,0,0.150577011075896,0,0.150577011075896,0,0,0,0,0,0,0,0,0,0,0,0.150577011075896,0,0,0,0,0,0,0,0,0,0,0,0.905529488682197,0,0,1.21307590653591,0.262173581098575,0,0.5423888076298,0,0.185736907108178,0,0,0,0,0,0,0,0,0,0.150577011075896,0,0,0,0.542943698819518,0,0.177796948868548,0,0,0,0,0,0,0,0,0,0,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| |||
|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=3H100-94-25 | |rna_catalog_number=3H100-94-25 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=118C4 | |rna_tube_id=118C4 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10013.CAGATC | |||
|sample_age=29 | |sample_age=29 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.74784295666309e-292!GO:0043227;membrane-bound organelle;1.39150287022836e-108!GO:0043231;intracellular membrane-bound organelle;2.21716573796632e-108!GO:0043226;organelle;1.19442053985327e-98!GO:0043229;intracellular organelle;4.26845197551783e-98!GO:0005737;cytoplasm;9.95170323330757e-95!GO:0005515;protein binding;1.94292464963247e-62!GO:0043170;macromolecule metabolic process;8.74699820298053e-61!GO:0044238;primary metabolic process;3.55180346091201e-59!GO:0044237;cellular metabolic process;9.11570767338206e-59!GO:0044422;organelle part;2.30330286993916e-57!GO:0044446;intracellular organelle part;4.43347682567024e-56!GO:0005634;nucleus;4.29162175382078e-55!GO:0044444;cytoplasmic part;6.59898804893407e-53!GO:0043283;biopolymer metabolic process;7.11490261993857e-45!GO:0044428;nuclear part;2.74733001195124e-42!GO:0033036;macromolecule localization;6.91837346044417e-42!GO:0015031;protein transport;4.9260470055464e-41!GO:0045184;establishment of protein localization;8.51109007827726e-41!GO:0008104;protein localization;6.01760701405504e-39!GO:0019538;protein metabolic process;9.99667624892659e-39!GO:0032991;macromolecular complex;2.08446981746944e-38!GO:0044260;cellular macromolecule metabolic process;5.21713126542816e-36!GO:0044267;cellular protein metabolic process;1.02554513937449e-35!GO:0003723;RNA binding;1.51307010879273e-34!GO:0043233;organelle lumen;4.47746704146464e-29!GO:0031974;membrane-enclosed lumen;4.47746704146464e-29!GO:0031981;nuclear lumen;2.79130834074379e-28!GO:0016071;mRNA metabolic process;3.1793602052293e-28!GO:0012501;programmed cell death;6.11583180486872e-28!GO:0006915;apoptosis;6.4554883779244e-28!GO:0031090;organelle membrane;7.68023113304674e-27!GO:0046907;intracellular transport;1.11092753796455e-26!GO:0008219;cell death;2.06653645592046e-26!GO:0016265;death;2.06653645592046e-26!GO:0043412;biopolymer modification;3.32833035060875e-26!GO:0016043;cellular component organization and biogenesis;9.52308297864262e-26!GO:0010467;gene expression;2.61257015098932e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.39646029516005e-25!GO:0006464;protein modification process;4.55616750870822e-25!GO:0006886;intracellular protein transport;6.87717008476496e-25!GO:0043687;post-translational protein modification;1.73282800045207e-24!GO:0043234;protein complex;2.36959182152308e-24!GO:0006397;mRNA processing;9.12058425953762e-24!GO:0005654;nucleoplasm;1.45540802716245e-23!GO:0006512;ubiquitin cycle;2.78212192292028e-23!GO:0008380;RNA splicing;5.88293295935595e-23!GO:0006396;RNA processing;4.20648093312727e-22!GO:0051649;establishment of cellular localization;1.52604225407682e-21!GO:0051641;cellular localization;1.8879349813805e-21!GO:0005829;cytosol;2.88738097371175e-20!GO:0044451;nucleoplasm part;9.99732442578617e-20!GO:0000166;nucleotide binding;1.06636956507365e-19!GO:0007242;intracellular signaling cascade;4.86867840841125e-19!GO:0030529;ribonucleoprotein complex;5.66785980844109e-19!GO:0008134;transcription factor binding;6.32713009706188e-19!GO:0007243;protein kinase cascade;3.54843968670391e-18!GO:0042981;regulation of apoptosis;3.93900706306971e-18!GO:0043067;regulation of programmed cell death;6.77417559598141e-18!GO:0065003;macromolecular complex assembly;1.26728131033017e-17!GO:0050794;regulation of cellular process;2.76318581194349e-17!GO:0016192;vesicle-mediated transport;5.01215454154622e-17!GO:0016070;RNA metabolic process;7.18691705633528e-17!GO:0005794;Golgi apparatus;1.66634505390327e-16!GO:0006793;phosphorus metabolic process;2.17608552527194e-16!GO:0006796;phosphate metabolic process;2.17608552527194e-16!GO:0044265;cellular macromolecule catabolic process;4.76102340706373e-16!GO:0005681;spliceosome;2.46748822898266e-15!GO:0032553;ribonucleotide binding;2.68516143973039e-15!GO:0032555;purine ribonucleotide binding;2.68516143973039e-15!GO:0022607;cellular component assembly;6.39246098172027e-15!GO:0016604;nuclear body;1.49462557126064e-14!GO:0006996;organelle organization and biogenesis;2.60051194306104e-14!GO:0016310;phosphorylation;2.86695743240007e-14!GO:0017076;purine nucleotide binding;2.95061315234235e-14!GO:0003676;nucleic acid binding;5.39640679336467e-14!GO:0012505;endomembrane system;6.44455494988496e-14!GO:0050789;regulation of biological process;8.31871912469126e-14!GO:0031967;organelle envelope;1.30883129281016e-13!GO:0006259;DNA metabolic process;1.31855611310719e-13!GO:0031975;envelope;1.94291074283761e-13!GO:0006412;translation;2.92466023855235e-13!GO:0016462;pyrophosphatase activity;3.05163533674701e-13!GO:0016607;nuclear speck;3.12663683237877e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.21310922178022e-13!GO:0019941;modification-dependent protein catabolic process;3.23617299671555e-13!GO:0043632;modification-dependent macromolecule catabolic process;3.23617299671555e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;3.60457264500133e-13!GO:0017111;nucleoside-triphosphatase activity;3.70088182731407e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;3.9497946151112e-13!GO:0005524;ATP binding;4.5520992844502e-13!GO:0006511;ubiquitin-dependent protein catabolic process;5.04016396737221e-13!GO:0044257;cellular protein catabolic process;6.23061493226307e-13!GO:0016874;ligase activity;9.02944494167395e-13!GO:0006913;nucleocytoplasmic transport;1.25868859647161e-12!GO:0065007;biological regulation;1.4836638948095e-12!GO:0032559;adenyl ribonucleotide binding;1.7496656642192e-12!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.93590529056139e-12!GO:0048523;negative regulation of cellular process;2.44608959837999e-12!GO:0051169;nuclear transport;2.83840935460642e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.19882806372869e-12!GO:0006605;protein targeting;5.19882806372869e-12!GO:0006366;transcription from RNA polymerase II promoter;5.19882806372869e-12!GO:0065009;regulation of a molecular function;7.18977813283629e-12!GO:0043285;biopolymer catabolic process;1.0091036771743e-11!GO:0003712;transcription cofactor activity;1.06588902537299e-11!GO:0019222;regulation of metabolic process;1.23936504622992e-11!GO:0030554;adenyl nucleotide binding;2.31184092483894e-11!GO:0005768;endosome;2.77146189772297e-11!GO:0009057;macromolecule catabolic process;2.94963555422552e-11!GO:0008639;small protein conjugating enzyme activity;3.3444096821848e-11!GO:0019787;small conjugating protein ligase activity;4.61277525938239e-11!GO:0009059;macromolecule biosynthetic process;5.69491329793709e-11!GO:0004842;ubiquitin-protein ligase activity;6.53315316697071e-11!GO:0006950;response to stress;7.65483862233662e-11!GO:0009058;biosynthetic process;7.65483862233662e-11!GO:0002376;immune system process;7.69008655098082e-11!GO:0048519;negative regulation of biological process;7.87051275849508e-11!GO:0005739;mitochondrion;1.4209733524002e-10!GO:0043066;negative regulation of apoptosis;1.51652870552151e-10!GO:0044248;cellular catabolic process;1.7544995724735e-10!GO:0043069;negative regulation of programmed cell death;1.83847184288319e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.91554085285953e-10!GO:0048193;Golgi vesicle transport;6.76652674956501e-10!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.54433190816897e-09!GO:0051246;regulation of protein metabolic process;1.81722234270326e-09!GO:0004674;protein serine/threonine kinase activity;1.93826662136957e-09!GO:0005773;vacuole;2.01025541472002e-09!GO:0016568;chromatin modification;2.12630224360548e-09!GO:0030163;protein catabolic process;2.18070753207816e-09!GO:0044249;cellular biosynthetic process;2.29669383568487e-09!GO:0006916;anti-apoptosis;3.84325217191925e-09!GO:0031323;regulation of cellular metabolic process;6.87711630740709e-09!GO:0050790;regulation of catalytic activity;7.32101431168704e-09!GO:0003713;transcription coactivator activity;7.37174698542922e-09!GO:0022618;protein-RNA complex assembly;8.60636679916483e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.08458848827467e-08!GO:0016881;acid-amino acid ligase activity;1.12845579561877e-08!GO:0005635;nuclear envelope;1.49736759454967e-08!GO:0007049;cell cycle;1.59654237029509e-08!GO:0006119;oxidative phosphorylation;1.74977174340126e-08!GO:0007264;small GTPase mediated signal transduction;2.42255408581768e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.53195766322987e-08!GO:0043065;positive regulation of apoptosis;3.21293562370823e-08!GO:0006955;immune response;3.21293562370823e-08!GO:0009615;response to virus;3.47427476298633e-08!GO:0043068;positive regulation of programmed cell death;3.77703358039498e-08!GO:0006323;DNA packaging;4.10653608207146e-08!GO:0048522;positive regulation of cellular process;4.60966181537326e-08!GO:0048770;pigment granule;5.12679789649158e-08!GO:0042470;melanosome;5.12679789649158e-08!GO:0019899;enzyme binding;5.14159120942718e-08!GO:0006457;protein folding;5.56987648515453e-08!GO:0016887;ATPase activity;9.41097112105062e-08!GO:0044429;mitochondrial part;9.89547025749288e-08!GO:0051170;nuclear import;1.25845049233974e-07!GO:0044431;Golgi apparatus part;1.28142165557382e-07!GO:0016773;phosphotransferase activity, alcohol group as acceptor;1.34066317041843e-07!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.34677626765367e-07!GO:0031965;nuclear membrane;1.43585538579114e-07!GO:0000323;lytic vacuole;1.46028379760102e-07!GO:0005764;lysosome;1.46028379760102e-07!GO:0005770;late endosome;1.53796667862911e-07!GO:0006606;protein import into nucleus;1.71776472221264e-07!GO:0017038;protein import;2.08914983317324e-07!GO:0044453;nuclear membrane part;2.32410083682688e-07!GO:0016301;kinase activity;2.56135757758666e-07!GO:0044440;endosomal part;2.65372869470106e-07!GO:0010008;endosome membrane;2.65372869470106e-07!GO:0048518;positive regulation of biological process;2.65955361461525e-07!GO:0019829;cation-transporting ATPase activity;2.81004192044823e-07!GO:0016563;transcription activator activity;2.81004192044823e-07!GO:0008047;enzyme activator activity;3.08920219714453e-07!GO:0042623;ATPase activity, coupled;3.47154560386743e-07!GO:0010468;regulation of gene expression;3.77388165236802e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;3.77823828475396e-07!GO:0000375;RNA splicing, via transesterification reactions;3.77823828475396e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.77823828475396e-07!GO:0016787;hydrolase activity;3.8264637425358e-07!GO:0051276;chromosome organization and biogenesis;4.03894326037111e-07!GO:0016740;transferase activity;4.28807685614745e-07!GO:0031324;negative regulation of cellular metabolic process;4.51173895765459e-07!GO:0044445;cytosolic part;6.24883460082233e-07!GO:0000502;proteasome complex (sensu Eukaryota);6.52120913640326e-07!GO:0008135;translation factor activity, nucleic acid binding;6.88415231086277e-07!GO:0051726;regulation of cell cycle;7.51213899364289e-07!GO:0006974;response to DNA damage stimulus;7.62304061114228e-07!GO:0008565;protein transporter activity;7.70086209860862e-07!GO:0006917;induction of apoptosis;7.82353430211553e-07!GO:0048475;coated membrane;7.92551358864808e-07!GO:0030117;membrane coat;7.92551358864808e-07!GO:0060090;molecular adaptor activity;8.9001613545519e-07!GO:0009967;positive regulation of signal transduction;9.19636986809027e-07!GO:0005774;vacuolar membrane;9.30453314157694e-07!GO:0000074;regulation of progression through cell cycle;1.08191245447631e-06!GO:0005740;mitochondrial envelope;1.19702109585067e-06!GO:0006468;protein amino acid phosphorylation;1.20843228065869e-06!GO:0012502;induction of programmed cell death;1.21741157292093e-06!GO:0050657;nucleic acid transport;1.30677832555223e-06!GO:0051236;establishment of RNA localization;1.30677832555223e-06!GO:0050658;RNA transport;1.30677832555223e-06!GO:0005783;endoplasmic reticulum;1.41209973507862e-06!GO:0006446;regulation of translational initiation;1.57121658166152e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.6073215855317e-06!GO:0006403;RNA localization;1.61251378566301e-06!GO:0032446;protein modification by small protein conjugation;1.71845491448217e-06!GO:0009966;regulation of signal transduction;2.55574126962358e-06!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.78308588448024e-06!GO:0045786;negative regulation of progression through cell cycle;2.80548445193875e-06!GO:0031966;mitochondrial membrane;3.26156270668989e-06!GO:0009892;negative regulation of metabolic process;3.28732082936068e-06!GO:0006350;transcription;3.38290184684662e-06!GO:0003743;translation initiation factor activity;3.39896748924041e-06!GO:0044437;vacuolar part;3.48999324506738e-06!GO:0016564;transcription repressor activity;3.61694750508438e-06!GO:0016197;endosome transport;4.35376991001706e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.9076374031179e-06!GO:0006413;translational initiation;5.20299352560374e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.59358702268003e-06!GO:0019866;organelle inner membrane;5.75450485736071e-06!GO:0030695;GTPase regulator activity;5.7578803448888e-06!GO:0009056;catabolic process;5.77443560298943e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.82654401092528e-06!GO:0016567;protein ubiquitination;6.3053260197543e-06!GO:0006461;protein complex assembly;6.3199524146517e-06!GO:0051186;cofactor metabolic process;6.41979942253086e-06!GO:0006417;regulation of translation;7.42404244301447e-06!GO:0005765;lysosomal membrane;8.63659684827135e-06!GO:0000139;Golgi membrane;9.84115075041879e-06!GO:0009607;response to biotic stimulus;1.06566771674165e-05!GO:0030120;vesicle coat;1.06566771674165e-05!GO:0030662;coated vesicle membrane;1.06566771674165e-05!GO:0008270;zinc ion binding;1.16128679354392e-05!GO:0051028;mRNA transport;1.1683777778385e-05!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.17142657174149e-05!GO:0000151;ubiquitin ligase complex;1.17994569912516e-05!GO:0015986;ATP synthesis coupled proton transport;1.18015668495664e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.18015668495664e-05!GO:0016481;negative regulation of transcription;1.19085686854604e-05!GO:0003924;GTPase activity;1.30578741605198e-05!GO:0051082;unfolded protein binding;1.37202030554753e-05!GO:0048468;cell development;1.70721748602906e-05!GO:0005643;nuclear pore;1.83651327644898e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.86494327366288e-05!GO:0004386;helicase activity;2.05216113676559e-05!GO:0009889;regulation of biosynthetic process;2.42118355057762e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.69367550607185e-05!GO:0015078;hydrogen ion transmembrane transporter activity;2.78038982306701e-05!GO:0051336;regulation of hydrolase activity;2.87334053235375e-05!GO:0005769;early endosome;2.89009410558079e-05!GO:0005096;GTPase activator activity;2.89356612090066e-05!GO:0046914;transition metal ion binding;3.13955024576841e-05!GO:0031326;regulation of cellular biosynthetic process;3.23415482310035e-05!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.63583807910678e-05!GO:0007265;Ras protein signal transduction;4.20468883526582e-05!GO:0006754;ATP biosynthetic process;4.48534728928945e-05!GO:0006753;nucleoside phosphate metabolic process;4.48534728928945e-05!GO:0005057;receptor signaling protein activity;4.54317387844722e-05!GO:0006281;DNA repair;4.70945310035743e-05!GO:0044432;endoplasmic reticulum part;4.72496624888812e-05!GO:0005525;GTP binding;4.72496624888812e-05!GO:0032940;secretion by cell;4.72803344971801e-05!GO:0008026;ATP-dependent helicase activity;5.49228421543727e-05!GO:0006732;coenzyme metabolic process;5.52561188336975e-05!GO:0005070;SH3/SH2 adaptor activity;5.69574686994452e-05!GO:0022402;cell cycle process;5.75266583383813e-05!GO:0006401;RNA catabolic process;5.78459632997178e-05!GO:0051168;nuclear export;6.03418923506657e-05!GO:0031902;late endosome membrane;6.31912724681587e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.37338484565381e-05!GO:0033279;ribosomal subunit;6.37553248810784e-05!GO:0045449;regulation of transcription;6.42153028634942e-05!GO:0005789;endoplasmic reticulum membrane;6.44141917999296e-05!GO:0006351;transcription, DNA-dependent;6.75297645791839e-05!GO:0031982;vesicle;6.80434621691312e-05!GO:0005840;ribosome;7.18354490269793e-05!GO:0032774;RNA biosynthetic process;7.73667994517759e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.76019571166659e-05!GO:0043228;non-membrane-bound organelle;7.8970330685503e-05!GO:0043232;intracellular non-membrane-bound organelle;7.8970330685503e-05!GO:0043566;structure-specific DNA binding;7.99087967301812e-05!GO:0006402;mRNA catabolic process;8.7577562600234e-05!GO:0005798;Golgi-associated vesicle;8.9183082758447e-05!GO:0008632;apoptotic program;9.55916258205063e-05!GO:0005083;small GTPase regulator activity;0.000103593771861656!GO:0005793;ER-Golgi intermediate compartment;0.000108123385364677!GO:0046034;ATP metabolic process;0.000117994283423405!GO:0065004;protein-DNA complex assembly;0.000123888785061093!GO:0046930;pore complex;0.000156867928302607!GO:0051338;regulation of transferase activity;0.000160117231746729!GO:0004672;protein kinase activity;0.00016973869860756!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000171209972689941!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000171209972689941!GO:0009150;purine ribonucleotide metabolic process;0.000179562063060549!GO:0009152;purine ribonucleotide biosynthetic process;0.000186991788363117!GO:0009259;ribonucleotide metabolic process;0.000190006120220361!GO:0043549;regulation of kinase activity;0.000211366771624692!GO:0005743;mitochondrial inner membrane;0.000220154041018578!GO:0045859;regulation of protein kinase activity;0.000232989306833155!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00024017576178033!GO:0009142;nucleoside triphosphate biosynthetic process;0.000243684062972118!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000243684062972118!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000247230996112327!GO:0005885;Arp2/3 protein complex;0.000257591180578075!GO:0031410;cytoplasmic vesicle;0.000274159584001436!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000274159584001436!GO:0009144;purine nucleoside triphosphate metabolic process;0.000274159584001436!GO:0002757;immune response-activating signal transduction;0.000277428920750273!GO:0003714;transcription corepressor activity;0.0002825222248483!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000296215417908654!GO:0006352;transcription initiation;0.000300948770408415!GO:0005813;centrosome;0.000309647404310196!GO:0044455;mitochondrial membrane part;0.000320276321053872!GO:0016044;membrane organization and biogenesis;0.000327430538809968!GO:0007050;cell cycle arrest;0.000341604006592971!GO:0005730;nucleolus;0.000342401557247732!GO:0006355;regulation of transcription, DNA-dependent;0.000350561246353473!GO:0032561;guanyl ribonucleotide binding;0.000355910725279581!GO:0019001;guanyl nucleotide binding;0.000355910725279581!GO:0009199;ribonucleoside triphosphate metabolic process;0.000365526473901211!GO:0003735;structural constituent of ribosome;0.000375543318257345!GO:0016363;nuclear matrix;0.000411831554623658!GO:0031988;membrane-bound vesicle;0.000436811790258981!GO:0006163;purine nucleotide metabolic process;0.000439656370790518!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000446791495065922!GO:0015399;primary active transmembrane transporter activity;0.000446791495065922!GO:0009719;response to endogenous stimulus;0.00046233742782743!GO:0030036;actin cytoskeleton organization and biogenesis;0.000490564877052741!GO:0006613;cotranslational protein targeting to membrane;0.000503135378182363!GO:0006164;purine nucleotide biosynthetic process;0.000503135378182363!GO:0005815;microtubule organizing center;0.000510369926062091!GO:0043087;regulation of GTPase activity;0.00051591434946969!GO:0009260;ribonucleotide biosynthetic process;0.000515975920871043!GO:0043492;ATPase activity, coupled to movement of substances;0.000560078380907645!GO:0015630;microtubule cytoskeleton;0.000577653815532676!GO:0002764;immune response-regulating signal transduction;0.000625006035705636!GO:0005694;chromosome;0.000637539564299778!GO:0051188;cofactor biosynthetic process;0.000673341691220362!GO:0009141;nucleoside triphosphate metabolic process;0.000682086176790463!GO:0006752;group transfer coenzyme metabolic process;0.000700447847904021!GO:0004722;protein serine/threonine phosphatase activity;0.000723237693262714!GO:0043085;positive regulation of catalytic activity;0.000724894269194995!GO:0003697;single-stranded DNA binding;0.000727118336619519!GO:0030658;transport vesicle membrane;0.000736083626323878!GO:0005637;nuclear inner membrane;0.00073814566720746!GO:0045045;secretory pathway;0.000766953165068886!GO:0051707;response to other organism;0.000766953165068886!GO:0005746;mitochondrial respiratory chain;0.000768843923749024!GO:0031901;early endosome membrane;0.000771893724373046!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.000810009983381266!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000858611967215764!GO:0044262;cellular carbohydrate metabolic process;0.000974778472704843!GO:0009108;coenzyme biosynthetic process;0.00100380059287023!GO:0016023;cytoplasmic membrane-bound vesicle;0.00103758404306694!GO:0046822;regulation of nucleocytoplasmic transport;0.00104991692679073!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00113805010275484!GO:0065002;intracellular protein transport across a membrane;0.00113996779470823!GO:0009893;positive regulation of metabolic process;0.00114068977778189!GO:0006333;chromatin assembly or disassembly;0.00114470185498346!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00114470185498346!GO:0006612;protein targeting to membrane;0.00117515851426392!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0012330921584668!GO:0006818;hydrogen transport;0.00128290268420767!GO:0045893;positive regulation of transcription, DNA-dependent;0.00134230229005764!GO:0006643;membrane lipid metabolic process;0.00137862443767703!GO:0005099;Ras GTPase activator activity;0.00138461449173293!GO:0005839;proteasome core complex (sensu Eukaryota);0.0014816064023299!GO:0008654;phospholipid biosynthetic process;0.0014899993761544!GO:0016791;phosphoric monoester hydrolase activity;0.00152843074627421!GO:0003724;RNA helicase activity;0.0015572725118016!GO:0004428;inositol or phosphatidylinositol kinase activity;0.00157666576204331!GO:0005667;transcription factor complex;0.0016042738093703!GO:0030133;transport vesicle;0.00161206018640442!GO:0051223;regulation of protein transport;0.00166577813109414!GO:0031252;leading edge;0.00168601736025763!GO:0016251;general RNA polymerase II transcription factor activity;0.00170246197717697!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00178710844853129!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);0.00183934730158426!GO:0015992;proton transport;0.00187988525979058!GO:0030660;Golgi-associated vesicle membrane;0.00204093549335562!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00211316754274216!GO:0008286;insulin receptor signaling pathway;0.00212449288611476!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00213357400794263!GO:0030258;lipid modification;0.00216126909697846!GO:0045892;negative regulation of transcription, DNA-dependent;0.00223258651016795!GO:0007034;vacuolar transport;0.00230114113224364!GO:0030384;phosphoinositide metabolic process;0.00231226803567081!GO:0008234;cysteine-type peptidase activity;0.00236578094973295!GO:0030118;clathrin coat;0.00238922107806965!GO:0000287;magnesium ion binding;0.00249468206558937!GO:0006260;DNA replication;0.00255363910479703!GO:0022890;inorganic cation transmembrane transporter activity;0.00257614460293765!GO:0006650;glycerophospholipid metabolic process;0.00289426016933608!GO:0051427;hormone receptor binding;0.00295698276265322!GO:0051789;response to protein stimulus;0.0031732416403749!GO:0006986;response to unfolded protein;0.0031732416403749!GO:0050136;NADH dehydrogenase (quinone) activity;0.00324793717164399!GO:0003954;NADH dehydrogenase activity;0.00324793717164399!GO:0008137;NADH dehydrogenase (ubiquinone) activity;0.00324793717164399!GO:0031625;ubiquitin protein ligase binding;0.00331989562012515!GO:0006919;caspase activation;0.00334291108629689!GO:0044427;chromosomal part;0.00335629357458112!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00338040314303712!GO:0035257;nuclear hormone receptor binding;0.00343272941310989!GO:0006897;endocytosis;0.00343272941310989!GO:0010324;membrane invagination;0.00343272941310989!GO:0030521;androgen receptor signaling pathway;0.00347972432322942!GO:0004298;threonine endopeptidase activity;0.00359280219113894!GO:0006954;inflammatory response;0.00359316049251075!GO:0015935;small ribosomal subunit;0.00359316049251075!GO:0006952;defense response;0.00361440665482081!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;0.00370270950170103!GO:0032318;regulation of Ras GTPase activity;0.00379252240234708!GO:0030099;myeloid cell differentiation;0.00380015572443395!GO:0045941;positive regulation of transcription;0.00380015572443395!GO:0003729;mRNA binding;0.00401531703747712!GO:0042775;organelle ATP synthesis coupled electron transport;0.00405920872568853!GO:0042773;ATP synthesis coupled electron transport;0.00405920872568853!GO:0043280;positive regulation of caspase activity;0.00442413934265098!GO:0008287;protein serine/threonine phosphatase complex;0.00448909696670547!GO:0030518;steroid hormone receptor signaling pathway;0.00465157804874923!GO:0000245;spliceosome assembly;0.00467058802088066!GO:0043281;regulation of caspase activity;0.0052016227444247!GO:0015631;tubulin binding;0.00529356800134345!GO:0006914;autophagy;0.00529759537302356!GO:0030127;COPII vesicle coat;0.00540406625580967!GO:0012507;ER to Golgi transport vesicle membrane;0.00540406625580967!GO:0033157;regulation of intracellular protein transport;0.00540406625580967!GO:0042306;regulation of protein import into nucleus;0.00540406625580967!GO:0033367;protein localization in mast cell secretory granule;0.00540406625580967!GO:0033365;protein localization in organelle;0.00540406625580967!GO:0033371;T cell secretory granule organization and biogenesis;0.00540406625580967!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00540406625580967!GO:0033375;protease localization in T cell secretory granule;0.00540406625580967!GO:0042629;mast cell granule;0.00540406625580967!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00540406625580967!GO:0033364;mast cell secretory granule organization and biogenesis;0.00540406625580967!GO:0033380;granzyme B localization in T cell secretory granule;0.00540406625580967!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00540406625580967!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00540406625580967!GO:0033368;protease localization in mast cell secretory granule;0.00540406625580967!GO:0033366;protein localization in secretory granule;0.00540406625580967!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00540406625580967!GO:0033374;protein localization in T cell secretory granule;0.00540406625580967!GO:0006611;protein export from nucleus;0.0055412347872053!GO:0030029;actin filament-based process;0.00564841289187755!GO:0001816;cytokine production;0.00567951067127523!GO:0030041;actin filament polymerization;0.00574352091770846!GO:0050851;antigen receptor-mediated signaling pathway;0.00580577413644236!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;0.00601938255271715!GO:0042802;identical protein binding;0.00603241666424967!GO:0008186;RNA-dependent ATPase activity;0.00611221615772011!GO:0006672;ceramide metabolic process;0.00614547960561346!GO:0030964;NADH dehydrogenase complex (quinone);0.00625870729229097!GO:0045271;respiratory chain complex I;0.00625870729229097!GO:0005747;mitochondrial respiratory chain complex I;0.00625870729229097!GO:0030218;erythrocyte differentiation;0.00625870729229097!GO:0033673;negative regulation of kinase activity;0.00631754813658037!GO:0006469;negative regulation of protein kinase activity;0.00631754813658037!GO:0051090;regulation of transcription factor activity;0.00641637319857923!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00658902565658411!GO:0046519;sphingoid metabolic process;0.00680842021372806!GO:0031325;positive regulation of cellular metabolic process;0.0070064369043006!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;0.007235163034433!GO:0046983;protein dimerization activity;0.00741581012242466!GO:0000165;MAPKKK cascade;0.00778227510150297!GO:0000785;chromatin;0.00825486554673911!GO:0001819;positive regulation of cytokine production;0.0082900959572008!GO:0018193;peptidyl-amino acid modification;0.00831551348190168!GO:0045637;regulation of myeloid cell differentiation;0.00840521067891116!GO:0003690;double-stranded DNA binding;0.00850876172197289!GO:0046966;thyroid hormone receptor binding;0.00856213675519069!GO:0030134;ER to Golgi transport vesicle;0.00887251992623316!GO:0007041;lysosomal transport;0.00897510663193866!GO:0006891;intra-Golgi vesicle-mediated transport;0.00900264024230427!GO:0008017;microtubule binding;0.00952868769789253!GO:0022415;viral reproductive process;0.00966974345956886!GO:0002467;germinal center formation;0.0098729667435659!GO:0051345;positive regulation of hydrolase activity;0.0098887319634343!GO:0008383;manganese superoxide dismutase activity;0.00989169597294906!GO:0001315;age-dependent response to reactive oxygen species;0.00989169597294906!GO:0043506;regulation of JNK activity;0.0100460346805073!GO:0003702;RNA polymerase II transcription factor activity;0.0102565988625283!GO:0006607;NLS-bearing substrate import into nucleus;0.0104927930333855!GO:0019318;hexose metabolic process;0.010994877531154!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0110461262071016!GO:0030176;integral to endoplasmic reticulum membrane;0.0110465354737985!GO:0003725;double-stranded RNA binding;0.0110677158465665!GO:0007040;lysosome organization and biogenesis;0.0110777923764766!GO:0016311;dephosphorylation;0.0111473857438105!GO:0000119;mediator complex;0.0119028956521884!GO:0046854;phosphoinositide phosphorylation;0.0120124663757887!GO:0008637;apoptotic mitochondrial changes;0.0120317576596599!GO:0030119;AP-type membrane coat adaptor complex;0.0120805662792089!GO:0002274;myeloid leukocyte activation;0.0121853715250476!GO:0006644;phospholipid metabolic process;0.0121853715250476!GO:0051348;negative regulation of transferase activity;0.0121853715250476!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0121853715250476!GO:0046578;regulation of Ras protein signal transduction;0.012253271758502!GO:0008656;caspase activator activity;0.0124217675525226!GO:0006984;ER-nuclear signaling pathway;0.0124641589261587!GO:0032640;tumor necrosis factor production;0.0127206783331794!GO:0045408;regulation of interleukin-6 biosynthetic process;0.0127869901418347!GO:0042990;regulation of transcription factor import into nucleus;0.0130985186937159!GO:0042991;transcription factor import into nucleus;0.0130985186937159!GO:0051056;regulation of small GTPase mediated signal transduction;0.0139544116820623!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0139544116820623!GO:0000278;mitotic cell cycle;0.0139729628324614!GO:0042110;T cell activation;0.0139987844419912!GO:0051252;regulation of RNA metabolic process;0.0140648655039772!GO:0045259;proton-transporting ATP synthase complex;0.0141122099943956!GO:0004402;histone acetyltransferase activity;0.0143109991849905!GO:0004468;lysine N-acetyltransferase activity;0.0143109991849905!GO:0004004;ATP-dependent RNA helicase activity;0.0147045372738557!GO:0004721;phosphoprotein phosphatase activity;0.0147259443038757!GO:0009060;aerobic respiration;0.0147941810805912!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.015008940005143!GO:0017091;AU-rich element binding;0.0152924055511884!GO:0050779;RNA destabilization;0.0152924055511884!GO:0000289;poly(A) tail shortening;0.0152924055511884!GO:0009117;nucleotide metabolic process;0.0154703752601219!GO:0005996;monosaccharide metabolic process;0.0154703752601219!GO:0043405;regulation of MAP kinase activity;0.0154703752601219!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0163849695591941!GO:0045792;negative regulation of cell size;0.0164781845590237!GO:0033116;ER-Golgi intermediate compartment membrane;0.0165076081982267!GO:0007165;signal transduction;0.0165823555925665!GO:0048487;beta-tubulin binding;0.0172972544235512!GO:0032635;interleukin-6 production;0.0172972544235512!GO:0043623;cellular protein complex assembly;0.0174708912180868!GO:0002378;immunoglobulin biosynthetic process;0.017817042685821!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.017817042685821!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.017817042685821!GO:0005484;SNAP receptor activity;0.0178643690243183!GO:0007033;vacuole organization and biogenesis;0.0183930763123167!GO:0008624;induction of apoptosis by extracellular signals;0.0184323090780291!GO:0007259;JAK-STAT cascade;0.0188017478060816!GO:0001891;phagocytic cup;0.019029527384907!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0192359603180364!GO:0002819;regulation of adaptive immune response;0.0192359603180364!GO:0019864;IgG binding;0.0192359603180364!GO:0030308;negative regulation of cell growth;0.0192489004081923!GO:0005669;transcription factor TFIID complex;0.0193877696784648!GO:0030131;clathrin adaptor complex;0.0196249808939518!GO:0016505;apoptotic protease activator activity;0.0200530502950528!GO:0030522;intracellular receptor-mediated signaling pathway;0.0205233088684334!GO:0009611;response to wounding;0.0206688265326382!GO:0015923;mannosidase activity;0.0210235056869563!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.0210235056869563!GO:0042226;interleukin-6 biosynthetic process;0.0214732356022223!GO:0031980;mitochondrial lumen;0.0214732356022223!GO:0005759;mitochondrial matrix;0.0214732356022223!GO:0002252;immune effector process;0.0218340499857986!GO:0006405;RNA export from nucleus;0.0218762789307166!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0220302165548259!GO:0031098;stress-activated protein kinase signaling pathway;0.0220721762815522!GO:0045321;leukocyte activation;0.0220834243504691!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0240028775725198!GO:0030097;hemopoiesis;0.0246648412375014!GO:0045926;negative regulation of growth;0.0248598997668587!GO:0015934;large ribosomal subunit;0.025816606329172!GO:0006516;glycoprotein catabolic process;0.0265555928337401!GO:0001726;ruffle;0.0265804244374064!GO:0031072;heat shock protein binding;0.0265804244374064!GO:0051059;NF-kappaB binding;0.0268031625191029!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0268446946978641!GO:0045047;protein targeting to ER;0.0268446946978641!GO:0046834;lipid phosphorylation;0.0270500581603696!GO:0019901;protein kinase binding;0.0273357204636221!GO:0051049;regulation of transport;0.0275299470919112!GO:0008625;induction of apoptosis via death domain receptors;0.0275755564737319!GO:0000209;protein polyubiquitination;0.0276341284982074!GO:0050811;GABA receptor binding;0.0276341284982074!GO:0050900;leukocyte migration;0.0282201527879856!GO:0032386;regulation of intracellular transport;0.0285800271791132!GO:0001775;cell activation;0.0285886763436629!GO:0007005;mitochondrion organization and biogenesis;0.0286792879980167!GO:0006509;membrane protein ectodomain proteolysis;0.0286792879980167!GO:0033619;membrane protein proteolysis;0.0286792879980167!GO:0001817;regulation of cytokine production;0.0294564993296386!GO:0051251;positive regulation of lymphocyte activation;0.0295875599969198!GO:0030968;unfolded protein response;0.0300362584212079!GO:0030674;protein binding, bridging;0.0300971649158855!GO:0045646;regulation of erythrocyte differentiation;0.0303908396267646!GO:0046467;membrane lipid biosynthetic process;0.0303957730181586!GO:0008154;actin polymerization and/or depolymerization;0.0304672257853598!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0305891294902893!GO:0048002;antigen processing and presentation of peptide antigen;0.0306621578693257!GO:0006458;'de novo' protein folding;0.0306621578693257!GO:0051084;'de novo' posttranslational protein folding;0.0306621578693257!GO:0006470;protein amino acid dephosphorylation;0.0311496051431141!GO:0030693;caspase activity;0.0311496051431141!GO:0051092;activation of NF-kappaB transcription factor;0.0317138696819388!GO:0008139;nuclear localization sequence binding;0.0317702996354476!GO:0045603;positive regulation of endothelial cell differentiation;0.0330702398663659!GO:0003682;chromatin binding;0.0331025979946717!GO:0043433;negative regulation of transcription factor activity;0.0334137205760134!GO:0012506;vesicle membrane;0.0334137205760134!GO:0002250;adaptive immune response;0.0338696371758262!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0338696371758262!GO:0004982;N-formyl peptide receptor activity;0.0340619933699519!GO:0019783;small conjugating protein-specific protease activity;0.0341101800809966!GO:0004860;protein kinase inhibitor activity;0.0342723763354234!GO:0030659;cytoplasmic vesicle membrane;0.0342777847436031!GO:0045113;regulation of integrin biosynthetic process;0.0350719888500055!GO:0045112;integrin biosynthetic process;0.0350719888500055!GO:0016671;oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;0.0351089787813226!GO:0048500;signal recognition particle;0.0357371746500015!GO:0002440;production of molecular mediator of immune response;0.0357371746500015!GO:0030125;clathrin vesicle coat;0.0357752770046746!GO:0030665;clathrin coated vesicle membrane;0.0357752770046746!GO:0019210;kinase inhibitor activity;0.0358000365380965!GO:0030140;trans-Golgi network transport vesicle;0.0360689650674904!GO:0046934;phosphatidylinositol-4,5-bisphosphate 3-kinase activity;0.0360689650674904!GO:0043028;caspase regulator activity;0.0362305746246527!GO:0043300;regulation of leukocyte degranulation;0.036831457251696!GO:0050727;regulation of inflammatory response;0.0369326947042529!GO:0031347;regulation of defense response;0.0369326947042529!GO:0045576;mast cell activation;0.0373381074285601!GO:0032760;positive regulation of tumor necrosis factor production;0.0388060955158726!GO:0000060;protein import into nucleus, translocation;0.0393192062239208!GO:0031461;cullin-RING ubiquitin ligase complex;0.0400936786243212!GO:0016779;nucleotidyltransferase activity;0.0410670433334255!GO:0007254;JNK cascade;0.0415861706743856!GO:0004718;Janus kinase activity;0.0415861706743856!GO:0004177;aminopeptidase activity;0.0417327015159371!GO:0044255;cellular lipid metabolic process;0.0417327015159371!GO:0050871;positive regulation of B cell activation;0.0417327015159371!GO:0002682;regulation of immune system process;0.0417873400995897!GO:0045746;negative regulation of Notch signaling pathway;0.0421958837670785!GO:0030137;COPI-coated vesicle;0.0424351901475133!GO:0030149;sphingolipid catabolic process;0.0426756935196244!GO:0004702;receptor signaling protein serine/threonine kinase activity;0.0429041157769088!GO:0002253;activation of immune response;0.0429041157769088!GO:0001667;ameboidal cell migration;0.0430444367095951!GO:0032027;myosin light chain binding;0.0430444367095951!GO:0046488;phosphatidylinositol metabolic process;0.0432848125165748!GO:0002443;leukocyte mediated immunity;0.0433334536432322!GO:0006099;tricarboxylic acid cycle;0.0435767597064742!GO:0046356;acetyl-CoA catabolic process;0.0435767597064742!GO:0000118;histone deacetylase complex;0.0437219353087276!GO:0032763;regulation of mast cell cytokine production;0.0437219353087276!GO:0032762;mast cell cytokine production;0.0437219353087276!GO:0005521;lamin binding;0.0438019094250598!GO:0043507;positive regulation of JNK activity;0.0439202216775459!GO:0043407;negative regulation of MAP kinase activity;0.0445535659480003!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0446454743415367!GO:0046456;icosanoid biosynthetic process;0.0448024752851589!GO:0008312;7S RNA binding;0.0451317047245739!GO:0043299;leukocyte degranulation;0.0453711140354214!GO:0047485;protein N-terminus binding;0.0455194957645325!GO:0031301;integral to organelle membrane;0.0457757332159319!GO:0030867;rough endoplasmic reticulum membrane;0.0458520646990737!GO:0000082;G1/S transition of mitotic cell cycle;0.0460910320500335!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.046124474046795!GO:0051329;interphase of mitotic cell cycle;0.046244772938011!GO:0004843;ubiquitin-specific protease activity;0.0464237962608357!GO:0045309;protein phosphorylated amino acid binding;0.0469237236993319!GO:0019883;antigen processing and presentation of endogenous antigen;0.0470205509741103!GO:0005048;signal sequence binding;0.0477699934361952!GO:0005942;phosphoinositide 3-kinase complex;0.0485221863706528!GO:0019865;immunoglobulin binding;0.0496810815937942!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0497242775196561!GO:0017166;vinculin binding;0.0499647541659561!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.0499647541659561 | |||
|sample_id=11390 | |sample_id=11390 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=CEBPA,B_DDIT3:4.9254166473;SPI1:4.47486288424;SPIB:4.18813953911;ATF5_CREB3:4.05986501042;FOXN1:4.0595936718;ETS1,2:3.88261409345;HLF:3.50546426832;DMAP1_NCOR{1,2}_SMARC:3.49247411077;FOXO1,3,4:3.29463029217;FOXP3:3.09080893697;RUNX1..3:3.06916780878;NANOG{mouse}:2.89123414726;NFKB1_REL_RELA:2.81516164614;FOX{F1,F2,J1}:2.80493864254;PAX2:2.7505191949;NFE2L2:2.73951919358;ELF1,2,4:2.72044220866;FOX{D1,D2}:2.69157761422;NFIL3:2.63206972915;CREB1:2.43425212066;MAFB:2.4153730157;FOXA2:2.38196355512;HBP1_HMGB_SSRP1_UBTF:2.35842142838;RXRA_VDR{dimer}:2.35005041206;ATF4:2.31762294382;STAT2,4,6:2.30479506863;NR1H4:2.2090603068;BPTF:2.17988583805;IRF7:2.17039248564;SREBF1,2:2.08981489765;EP300:2.08030928799;ALX4:1.87352553722;IRF1,2:1.85489076237;TGIF1:1.79651878232;HIF1A:1.74427747994;RFX2..5_RFXANK_RFXAP:1.74286255668;PAX3,7:1.72812218401;ATF6:1.7010178404;JUN:1.64052217592;SPZ1:1.57749653994;NFE2L1:1.5725821414;PPARG:1.40800433814;NFE2:1.39238019992;T:1.38789356871;FOSL2:1.38192032017;HMGA1,2:1.36486893815;POU5F1:1.32440780546;TFCP2:1.24845902652;GATA4:1.1111279959;ALX1:1.00125183157;NFATC1..3:0.98431860281;STAT1,3:0.973955119969;ATF2:0.945342343547;BACH2:0.907793720879;PAX8:0.882825715964;MYB:0.874789552279;MYFfamily:0.818665959611;NKX2-1,4:0.802375764217;ESRRA:0.792153706415;HMX1:0.773538886683;MZF1:0.755015260251;SRF:0.717169833434;ZNF423:0.669911318406;HOXA9_MEIS1:0.650082250416;MAZ:0.642346493698;NFIX:0.637573560171;FOS_FOS{B,L1}_JUN{B,D}:0.613521398224;RBPJ:0.608998793824;CDX1,2,4:0.588345781348;TLX2:0.576410973503;NKX3-2:0.471055070124;SMAD1..7,9:0.415663908492;SP1:0.329971440216;RORA:0.319404074239;PATZ1:0.300568997279;FOXD3:0.300405717176;RXR{A,B,G}:0.27528047373;TAL1_TCF{3,4,12}:0.274659956884;FOX{I1,J2}:0.255331935889;NR3C1:0.252002425281;RREB1:0.197746170577;GATA6:0.197683706846;NR5A1,2:0.194864549951;XBP1:0.172833317985;FOXQ1:0.134485367569;EGR1..3:0.105298135181;ZNF148:0.0515928930948;TFAP2{A,C}:0.044147303237;TFAP4:-0.0246091100851;IKZF1:-0.0593482338832;EVI1:-0.096829368077;CUX2:-0.107383669953;EN1,2:-0.126927353623;EBF1:-0.132558245426;NKX3-1:-0.200923618914;IKZF2:-0.207794221198;MYOD1:-0.242268719789;NR6A1:-0.305712365786;REST:-0.333572320815;POU2F1..3:-0.355513143957;PRDM1:-0.468146041803;ZBTB16:-0.498214409765;ZIC1..3:-0.511394673878;SOX2:-0.51322821555;ZEB1:-0.518239910484;MTE{core}:-0.547429137042;BREu{core}:-0.61860022914;HNF4A_NR2F1,2:-0.61992982367;HNF1A:-0.648988450394;MED-1{core}:-0.651480542434;SNAI1..3:-0.669510097892;TBX4,5:-0.71385269871;RFX1:-0.760206988447;ESR1:-0.775578729805;CRX:-0.777879402545;TFAP2B:-0.845165971769;AIRE:-0.8689641012;STAT5{A,B}:-0.892614842315;PAX1,9:-0.897603420362;KLF4:-0.899899443683;ZNF238:-0.904968743886;GTF2I:-0.922970435475;HIC1:-0.971913065302;PITX1..3:-1.02968963213;NHLH1,2:-1.05622620242;ZFP161:-1.0658094574;TFDP1:-1.15103003941;GLI1..3:-1.15907979614;PRRX1,2:-1.19536076657;DBP:-1.22108920262;ELK1,4_GABP{A,B1}:-1.2507501483;TOPORS:-1.29756287843;LEF1_TCF7_TCF7L1,2:-1.30640770454;HOX{A5,B5}:-1.30944023594;NKX2-2,8:-1.39264260354;FOXP1:-1.41296830115;LMO2:-1.50992097317;POU6F1:-1.52351256917;PDX1:-1.52611782349;VSX1,2:-1.53870536048;OCT4_SOX2{dimer}:-1.57291601547;MEF2{A,B,C,D}:-1.58048953356;SOX{8,9,10}:-1.60178298454;AR:-1.66872191817;MTF1:-1.6818375832;TEAD1:-1.77753458156;ZBTB6:-1.79187707577;E2F1..5:-1.7949940444;AHR_ARNT_ARNT2:-1.84827123792;FOXL1:-1.86627194827;NFY{A,B,C}:-1.88351266387;ADNP_IRX_SIX_ZHX:-1.90597931551;XCPE1{core}:-1.93230432806;TLX1..3_NFIC{dimer}:-1.96001714965;UFEwm:-2.05691802647;NKX2-3_NKX2-5:-2.07018194508;PAX5:-2.07320316419;NKX6-1,2:-2.08400844878;NANOG:-2.10576084062;HSF1,2:-2.11363786997;TBP:-2.11887058667;RXR{A,B,G}_{NR1H2,PPAR}dimers:-2.1407698111;FOXM1:-2.16457661001;PBX1:-2.19008690397;GZF1:-2.19724819505;POU3F1..4:-2.20636757349;SOX5:-2.24280451223;ONECUT1,2:-2.35103305126;SOX17:-2.40400720605;TP53:-2.4578615578;GTF2A1,2:-2.60655169547;NRF1:-2.64843778526;HOX{A4,D4}:-2.65787497034;HAND1,2:-2.70390050649;HES1:-2.704454002;LHX3,4:-2.75534464812;GFI1:-2.82957397511;MYBL2:-2.86548533092;GCM1,2:-2.8872013461;GFI1B:-2.8980554584;PAX4:-2.91525653271;ZNF384:-3.00263220862;TEF:-3.02636167783;POU1F1:-3.08843086069;CDC5L:-3.1738850989;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-3.19997661158;PAX6:-3.39623389427;ZNF143:-3.4311514719;ARID5B:-3.52417937069;YY1:-3.83482201579;bHLH_family:-4.33654466487;HOX{A6,A7,B6,B7}:-4.47849795622 | |top_motifs=CEBPA,B_DDIT3:4.9254166473;SPI1:4.47486288424;SPIB:4.18813953911;ATF5_CREB3:4.05986501042;FOXN1:4.0595936718;ETS1,2:3.88261409345;HLF:3.50546426832;DMAP1_NCOR{1,2}_SMARC:3.49247411077;FOXO1,3,4:3.29463029217;FOXP3:3.09080893697;RUNX1..3:3.06916780878;NANOG{mouse}:2.89123414726;NFKB1_REL_RELA:2.81516164614;FOX{F1,F2,J1}:2.80493864254;PAX2:2.7505191949;NFE2L2:2.73951919358;ELF1,2,4:2.72044220866;FOX{D1,D2}:2.69157761422;NFIL3:2.63206972915;CREB1:2.43425212066;MAFB:2.4153730157;FOXA2:2.38196355512;HBP1_HMGB_SSRP1_UBTF:2.35842142838;RXRA_VDR{dimer}:2.35005041206;ATF4:2.31762294382;STAT2,4,6:2.30479506863;NR1H4:2.2090603068;BPTF:2.17988583805;IRF7:2.17039248564;SREBF1,2:2.08981489765;EP300:2.08030928799;ALX4:1.87352553722;IRF1,2:1.85489076237;TGIF1:1.79651878232;HIF1A:1.74427747994;RFX2..5_RFXANK_RFXAP:1.74286255668;PAX3,7:1.72812218401;ATF6:1.7010178404;JUN:1.64052217592;SPZ1:1.57749653994;NFE2L1:1.5725821414;PPARG:1.40800433814;NFE2:1.39238019992;T:1.38789356871;FOSL2:1.38192032017;HMGA1,2:1.36486893815;POU5F1:1.32440780546;TFCP2:1.24845902652;GATA4:1.1111279959;ALX1:1.00125183157;NFATC1..3:0.98431860281;STAT1,3:0.973955119969;ATF2:0.945342343547;BACH2:0.907793720879;PAX8:0.882825715964;MYB:0.874789552279;MYFfamily:0.818665959611;NKX2-1,4:0.802375764217;ESRRA:0.792153706415;HMX1:0.773538886683;MZF1:0.755015260251;SRF:0.717169833434;ZNF423:0.669911318406;HOXA9_MEIS1:0.650082250416;MAZ:0.642346493698;NFIX:0.637573560171;FOS_FOS{B,L1}_JUN{B,D}:0.613521398224;RBPJ:0.608998793824;CDX1,2,4:0.588345781348;TLX2:0.576410973503;NKX3-2:0.471055070124;SMAD1..7,9:0.415663908492;SP1:0.329971440216;RORA:0.319404074239;PATZ1:0.300568997279;FOXD3:0.300405717176;RXR{A,B,G}:0.27528047373;TAL1_TCF{3,4,12}:0.274659956884;FOX{I1,J2}:0.255331935889;NR3C1:0.252002425281;RREB1:0.197746170577;GATA6:0.197683706846;NR5A1,2:0.194864549951;XBP1:0.172833317985;FOXQ1:0.134485367569;EGR1..3:0.105298135181;ZNF148:0.0515928930948;TFAP2{A,C}:0.044147303237;TFAP4:-0.0246091100851;IKZF1:-0.0593482338832;EVI1:-0.096829368077;CUX2:-0.107383669953;EN1,2:-0.126927353623;EBF1:-0.132558245426;NKX3-1:-0.200923618914;IKZF2:-0.207794221198;MYOD1:-0.242268719789;NR6A1:-0.305712365786;REST:-0.333572320815;POU2F1..3:-0.355513143957;PRDM1:-0.468146041803;ZBTB16:-0.498214409765;ZIC1..3:-0.511394673878;SOX2:-0.51322821555;ZEB1:-0.518239910484;MTE{core}:-0.547429137042;BREu{core}:-0.61860022914;HNF4A_NR2F1,2:-0.61992982367;HNF1A:-0.648988450394;MED-1{core}:-0.651480542434;SNAI1..3:-0.669510097892;TBX4,5:-0.71385269871;RFX1:-0.760206988447;ESR1:-0.775578729805;CRX:-0.777879402545;TFAP2B:-0.845165971769;AIRE:-0.8689641012;STAT5{A,B}:-0.892614842315;PAX1,9:-0.897603420362;KLF4:-0.899899443683;ZNF238:-0.904968743886;GTF2I:-0.922970435475;HIC1:-0.971913065302;PITX1..3:-1.02968963213;NHLH1,2:-1.05622620242;ZFP161:-1.0658094574;TFDP1:-1.15103003941;GLI1..3:-1.15907979614;PRRX1,2:-1.19536076657;DBP:-1.22108920262;ELK1,4_GABP{A,B1}:-1.2507501483;TOPORS:-1.29756287843;LEF1_TCF7_TCF7L1,2:-1.30640770454;HOX{A5,B5}:-1.30944023594;NKX2-2,8:-1.39264260354;FOXP1:-1.41296830115;LMO2:-1.50992097317;POU6F1:-1.52351256917;PDX1:-1.52611782349;VSX1,2:-1.53870536048;OCT4_SOX2{dimer}:-1.57291601547;MEF2{A,B,C,D}:-1.58048953356;SOX{8,9,10}:-1.60178298454;AR:-1.66872191817;MTF1:-1.6818375832;TEAD1:-1.77753458156;ZBTB6:-1.79187707577;E2F1..5:-1.7949940444;AHR_ARNT_ARNT2:-1.84827123792;FOXL1:-1.86627194827;NFY{A,B,C}:-1.88351266387;ADNP_IRX_SIX_ZHX:-1.90597931551;XCPE1{core}:-1.93230432806;TLX1..3_NFIC{dimer}:-1.96001714965;UFEwm:-2.05691802647;NKX2-3_NKX2-5:-2.07018194508;PAX5:-2.07320316419;NKX6-1,2:-2.08400844878;NANOG:-2.10576084062;HSF1,2:-2.11363786997;TBP:-2.11887058667;RXR{A,B,G}_{NR1H2,PPAR}dimers:-2.1407698111;FOXM1:-2.16457661001;PBX1:-2.19008690397;GZF1:-2.19724819505;POU3F1..4:-2.20636757349;SOX5:-2.24280451223;ONECUT1,2:-2.35103305126;SOX17:-2.40400720605;TP53:-2.4578615578;GTF2A1,2:-2.60655169547;NRF1:-2.64843778526;HOX{A4,D4}:-2.65787497034;HAND1,2:-2.70390050649;HES1:-2.704454002;LHX3,4:-2.75534464812;GFI1:-2.82957397511;MYBL2:-2.86548533092;GCM1,2:-2.8872013461;GFI1B:-2.8980554584;PAX4:-2.91525653271;ZNF384:-3.00263220862;TEF:-3.02636167783;POU1F1:-3.08843086069;CDC5L:-3.1738850989;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-3.19997661158;PAX6:-3.39623389427;ZNF143:-3.4311514719;ARID5B:-3.52417937069;YY1:-3.83482201579;bHLH_family:-4.33654466487;HOX{A6,A7,B6,B7}:-4.47849795622 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11390-118C4;search_select_hide=table117:FF:11390-118C4 | |||
}} | }} | ||
Latest revision as of 17:57, 4 June 2020
| Name: | Neutrophils, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11905 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11905
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11905
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.285 |
| 10 | 10 | 0.0797 |
| 100 | 100 | 0.253 |
| 101 | 101 | 0.667 |
| 102 | 102 | 0.832 |
| 103 | 103 | 0.175 |
| 104 | 104 | 0.666 |
| 105 | 105 | 0.34 |
| 106 | 106 | 2.99429e-4 |
| 107 | 107 | 0.509 |
| 108 | 108 | 0.429 |
| 109 | 109 | 0.253 |
| 11 | 11 | 0.245 |
| 110 | 110 | 0.671 |
| 111 | 111 | 0.383 |
| 112 | 112 | 0.361 |
| 113 | 113 | 0.47 |
| 114 | 114 | 0.0292 |
| 115 | 115 | 0.553 |
| 116 | 116 | 0.606 |
| 117 | 117 | 0.0183 |
| 118 | 118 | 0.144 |
| 119 | 119 | 0.532 |
| 12 | 12 | 0.436 |
| 120 | 120 | 0.653 |
| 121 | 121 | 0.604 |
| 122 | 122 | 0.85 |
| 123 | 123 | 0.519 |
| 124 | 124 | 0.84 |
| 125 | 125 | 0.225 |
| 126 | 126 | 0.118 |
| 127 | 127 | 0.433 |
| 128 | 128 | 0.0148 |
| 129 | 129 | 0.807 |
| 13 | 13 | 0.556 |
| 130 | 130 | 0.634 |
| 131 | 131 | 0.767 |
| 132 | 132 | 0.0787 |
| 133 | 133 | 0.785 |
| 134 | 134 | 0.506 |
| 135 | 135 | 0.211 |
| 136 | 136 | 0.581 |
| 137 | 137 | 3.74809e-4 |
| 138 | 138 | 0.148 |
| 139 | 139 | 0.164 |
| 14 | 14 | 0.259 |
| 140 | 140 | 0.51 |
| 141 | 141 | 0.338 |
| 142 | 142 | 0.484 |
| 143 | 143 | 0.0252 |
| 144 | 144 | 0.889 |
| 145 | 145 | 0.943 |
| 146 | 146 | 0.407 |
| 147 | 147 | 0.49 |
| 148 | 148 | 0.0665 |
| 149 | 149 | 0.619 |
| 15 | 15 | 0.0713 |
| 150 | 150 | 0.644 |
| 151 | 151 | 0.378 |
| 152 | 152 | 0.162 |
| 153 | 153 | 0.433 |
| 154 | 154 | 0.858 |
| 155 | 155 | 0.147 |
| 156 | 156 | 0.454 |
| 157 | 157 | 0.697 |
| 158 | 158 | 0.00724 |
| 159 | 159 | 0.453 |
| 16 | 16 | 0.508 |
| 160 | 160 | 0.612 |
| 161 | 161 | 0.956 |
| 162 | 162 | 0.14 |
| 163 | 163 | 0.562 |
| 164 | 164 | 0.17 |
| 165 | 165 | 0.181 |
| 166 | 166 | 0.929 |
| 167 | 167 | 0.796 |
| 168 | 168 | 0.528 |
| 169 | 169 | 0.0967 |
| 17 | 17 | 0.352 |
| 18 | 18 | 0.157 |
| 19 | 19 | 0.377 |
| 2 | 2 | 0.923 |
| 20 | 20 | 0.619 |
| 21 | 21 | 0.908 |
| 22 | 22 | 0.164 |
| 23 | 23 | 0.00572 |
| 24 | 24 | 0.355 |
| 25 | 25 | 0.251 |
| 26 | 26 | 0.162 |
| 27 | 27 | 0.623 |
| 28 | 28 | 0.265 |
| 29 | 29 | 0.438 |
| 3 | 3 | 0.301 |
| 30 | 30 | 0.767 |
| 31 | 31 | 0.758 |
| 32 | 32 | 0.537 |
| 33 | 33 | 0.302 |
| 34 | 34 | 0.588 |
| 35 | 35 | 0.137 |
| 36 | 36 | 0.34 |
| 37 | 37 | 0.224 |
| 38 | 38 | 0.482 |
| 39 | 39 | 0.779 |
| 4 | 4 | 0.607 |
| 40 | 40 | 0.626 |
| 41 | 41 | 0.00445 |
| 42 | 42 | 0.573 |
| 43 | 43 | 0.0599 |
| 44 | 44 | 0.943 |
| 45 | 45 | 0.435 |
| 46 | 46 | 0.398 |
| 47 | 47 | 0.658 |
| 48 | 48 | 0.755 |
| 49 | 49 | 0.155 |
| 5 | 5 | 0.129 |
| 50 | 50 | 0.983 |
| 51 | 51 | 0.358 |
| 52 | 52 | 0.221 |
| 53 | 53 | 0.429 |
| 54 | 54 | 0.286 |
| 55 | 55 | 0.706 |
| 56 | 56 | 0.66 |
| 57 | 57 | 0.48 |
| 58 | 58 | 0.138 |
| 59 | 59 | 0.0882 |
| 6 | 6 | 0.735 |
| 60 | 60 | 0.0181 |
| 61 | 61 | 0.323 |
| 62 | 62 | 0.0382 |
| 63 | 63 | 0.742 |
| 64 | 64 | 0.569 |
| 65 | 65 | 0.272 |
| 66 | 66 | 0.206 |
| 67 | 67 | 0.556 |
| 68 | 68 | 0.269 |
| 69 | 69 | 0.847 |
| 7 | 7 | 0.279 |
| 70 | 70 | 0.187 |
| 71 | 71 | 0.0557 |
| 72 | 72 | 0.463 |
| 73 | 73 | 0.297 |
| 74 | 74 | 0.0732 |
| 75 | 75 | 0.209 |
| 76 | 76 | 0.242 |
| 77 | 77 | 0.853 |
| 78 | 78 | 0.292 |
| 79 | 79 | 0.515 |
| 8 | 8 | 0.677 |
| 80 | 80 | 0.028 |
| 81 | 81 | 0.41 |
| 82 | 82 | 0.0367 |
| 83 | 83 | 0.306 |
| 84 | 84 | 0.775 |
| 85 | 85 | 0.0677 |
| 86 | 86 | 0.0283 |
| 87 | 87 | 0.424 |
| 88 | 88 | 0.594 |
| 89 | 89 | 0.106 |
| 9 | 9 | 0.161 |
| 90 | 90 | 0.122 |
| 91 | 91 | 0.408 |
| 92 | 92 | 0.226 |
| 93 | 93 | 0.445 |
| 94 | 94 | 0.0509 |
| 95 | 95 | 0.711 |
| 96 | 96 | 0.43 |
| 97 | 97 | 0.971 |
| 98 | 98 | 0.172 |
| 99 | 99 | 0.0124 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11905
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000122 human neutrophil sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000081 (blood cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000094 (granulocyte)
0000775 (neutrophil)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000122 (human neutrophil sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
