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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000055,UBERON:0000061,UBERON:0000119,UBERON:0000383,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000490,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000947,UBERON:0001009,UBERON:0001015,UBERON:0001062,UBERON:0001134,UBERON:0001135,UBERON:0001637,UBERON:0001981,UBERON:0002036,UBERON:0002049,UBERON:0002050,UBERON:0002111,UBERON:0002204,UBERON:0002329,UBERON:0002385,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003081,UBERON:0003082,UBERON:0003104,UBERON:0003509,UBERON:0003914,UBERON:0004111,UBERON:0004120,UBERON:0004178,UBERON:0004237,UBERON:0004290,UBERON:0004535,UBERON:0004537,UBERON:0004571,UBERON:0004572,UBERON:0004573,UBERON:0004695,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0006965,UBERON:0007500,UBERON:0007798,UBERON:0009142
|DRA_sample_Accession=CAGE@SAMD00005454
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000056,CL:0000144,CL:0000183,CL:0000187,CL:0000192,CL:0000211,CL:0000220,CL:0000222,CL:0000255,CL:0000355,CL:0000359,CL:0000393,CL:0000514,CL:0000548,CL:0000680,CL:0000723,CL:0002321,CL:0002371,CL:0002539
|accession_numbers=CAGE;DRX008043;DRR008915;DRZ000340;DRZ001725;DRZ011690;DRZ013075
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001135,UBERON:0000947,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0004573,UBERON:0002385,UBERON:0003509,UBERON:0007500,UBERON:0001981,UBERON:0004237,UBERON:0004695,UBERON:0002049,UBERON:0010317,UBERON:0002111,UBERON:0007798,UBERON:0001015,UBERON:0004178,UBERON:0002204,UBERON:0004535,UBERON:0004571,UBERON:0010191,UBERON:0000383,UBERON:0004572,UBERON:0004537,UBERON:0001009
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000192,CL:0000211,CL:0000255,CL:0000359,CL:0002539
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000167,FF:0000408,FF:0000350,FF:0000405,FF:0000168,FF:0000664
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.86!70.66!TCF21;;chr2:19558373..19558392,-!p1@OSR1!1.63!110.63!OSR1;;chr5:72744445..72744466,-!p2@FOXD1!1.52!52.99!FOXD1;;chr4:174450089..174450153,-!p2@HAND2!1.48!29.29!HAND2;;chr11:65686802..65686818,+!p6@DRAP1!1.45!46.02!DRAP1;;chr11:46299199..46299233,+!p1@CREB3L1!1.43!128.30!CREB3L1;;chr19:47523058..47523114,+!p1@NPAS1!1.42!25.10!NPAS1;;chr4:174451370..174451387,-!p1@HAND2!1.39!23.71!HAND2;;chr19:50432453..50432468,+!p1@ATF5!1.35!1163.51!ATF5;;chr5:72744594..72744609,-!p1@FOXD1!1.35!95.29!FOXD1;;chr9:132427883..132427951,+!p2@PRRX2!1.34!20.92!PRRX2;;chr11:65687362..65687436,+!p3@DRAP1!1.32!89.25!DRAP1;;chr5:72743793..72743855,-!p4@FOXD1!1.28!21.38!FOXD1;;chr18:19749386..19749404,+!p2@GATA6!1.27!25.10!GATA6;;chr11:65686732..65686756,+!p2@DRAP1!1.25!69.73!DRAP1;;chr2:239756671..239756732,+!p1@TWIST2!1.24!52.53!TWIST2;;chr18:19749541..19749557,+!p1@GATA6!1.23!49.27!GATA6;;chr9:132427972..132428056,+!p1@PRRX2!1.22!20.45!PRRX2;;chr2:239756739..239756755,+!p2@TWIST2!1.21!26.03!TWIST2;;chr12:66218598..66218645,+!p2@HMGA2!1.19!66.47!HMGA2;;chr17:46622070..46622109,-!p1@HOXB2!1.19!32.07!HOXB2;;chr11:46333934..46333963,+!p5@CREB3L1!1.16!13.48!CREB3L1;;chr12:66218836..66218888,+!p1@HMGA2!1.10!109.24!HMGA2;;chr17:46622114..46622138,-!p4@HOXB2!1.09!17.20!HOXB2;;chr11:65687222..65687240,+!p7@DRAP1!1.09!14.41!DRAP1;;chr11:46299443..46299459,+!p4@CREB3L1!1.08!11.16!CREB3L1;;chr11:46299539..46299620,+!p2@CREB3L1!1.06!17.66!CREB3L1;;chr19:13136130..13136165,+!p6@NFIX!1.06!13.95!NFIX;;chr11:65687158..65687216,+!p4@DRAP1!1.05!59.04!DRAP1;;chr19:50435736..50435781,+!p3@ATF5!1.03!13.48!ATF5;;chr16:86544113..86544145,+!p1@FOXF1!1.03!12.09!FOXF1;;chr19:13135582..13135600,+!p3@NFIX!1.03!9.76!NFIX;;chr12:66218904..66218913,+!p11@HMGA2!1.03!9.76!HMGA2;;chr12:66218255..66218304,+!p3@HMGA2!1.02!26.03!HMGA2;;chr1:170633348..170633399,+!p2@PRRX1!1.02!13.02!PRRX1;;chr7:1577899..1577943,+!p3@MAFK!1.01!9.30!MAFK;;chr17:46621937..46621966,-!p2@HOXB2!1.00!24.64!HOXB2;;chr5:72744562..72744573,-!p3@FOXD1!1.00!11.16!FOXD1;;chr8:55370487..55370503,+!p1@SOX17!0.99!8.83!SOX17;;chr6:10412600..10412637,-!p1@TFAP2A!0.98!14.41!TFAP2A;;chr3:52001448..52001478,-!p2@PCBP4!0.96!115.75!PCBP4;;chr19:13134772..13134822,+!p2@NFIX!0.96!12.09!NFIX;;chr1:170632285..170632309,+!p1@PRRX1!0.96!9.30!PRRX1;;chr17:46675420..46675465,-!p3@HOXB6!0.94!8.83!HOXB6;;chr5:72744336..72744359,-!p5@FOXD1!0.93!7.44!FOXD1;;chr11:65688877..65688891,+!p13@DRAP1!0.93!7.44!DRAP1;;chr1:8938709..8938720,-!p3@ENO1!0.92!367.23!ENO1;;chr1:170633262..170633285,+!p3@PRRX1!0.92!8.37!PRRX1;;chr2:101591314..101591333,+!p2@NPAS2!0.92!8.37!NPAS2;;chr6:10415276..10415341,-!p2@TFAP2A!0.91!8.83!TFAP2A;;chr7:35293685..35293718,-!p1@TBX20!0.90!6.97!TBX20;;chr12:66218923..66218934,+!p14@HMGA2!0.90!6.97!HMGA2;;chr3:141087454..141087465,+!p19@ZBTB38!0.90!6.97!ZBTB38;;chr1:23885981..23886002,-!p1@ID3!0.89!1252.76!ID3;;chr10:111967345..111967422,+!p1@MXI1!0.88!112.49!MXI1;;chr7:19157043..19157088,-!p2@TWIST1!0.86!16.27!TWIST1;;chr1:151032739..151032748,+!p6@MLLT11!0.86!7.90!MLLT11;;chr3:52001426..52001447,-!p3@PCBP4!0.85!18.13!PCBP4;;chr16:31076332..31076388,-!p3@ZNF668!0.85!6.04!ZNF668;;chr12:53614115..53614154,-!p1@RARG!0.84!33.47!RARG;;chr3:141087393..141087426,+!p3@ZBTB38!0.84!25.10!ZBTB38;;chr1:170632959..170632987,+!p4@PRRX1!0.84!6.51!PRRX1;;chr2:113993052..113993097,-!p2@PAX8!0.81!13.02!PAX8;;chr20:42543441..42543497,+!p1@TOX2!0.80!25.57!TOX2;;chr12:66218212..66218244,+!p5@HMGA2!0.80!7.90!HMGA2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.79!404.88!TAX1BP3;;chr15:96874927..96874938,+!p8@NR2F2!0.79!11.62!NR2F2;;chr12:66218469..66218477,+!p16@HMGA2!0.79!5.11!HMGA2;;chr11:65686952..65686975,+!p5@DRAP1!0.78!30.21!DRAP1;;chr11:65687243..65687276,+!p8@DRAP1!0.78!6.97!DRAP1;;chr15:67418177..67418204,+!p9@SMAD3!0.75!4.65!SMAD3;;chr17:46132044..46132080,+!p4@NFE2L1!0.75!4.65!NFE2L1;;chr19:13135386..13135435,+!p4@NFIX!0.75!4.65!NFIX;;chr1:170632250..170632277,+!p7@PRRX1!0.75!4.65!PRRX1;;chr7:27153454..27153469,-!p2@HOXA3!0.75!4.65!HOXA3;;chr7:27169801..27169844,-!p2@HOXA4!0.75!4.65!HOXA4;;chr17:46687959..46688007,-!p2@HOXB7!0.74!6.51!HOXB7;;chr14:62213758..62213774,+!p8@HIF1A!0.74!6.04!HIF1A;;chr8:49833948..49833973,-!p2@SNAI2!0.73!31.14!SNAI2;;chr15:42749722..42749739,-!p2@ZFP106!0.73!8.37!ZFP106;;chr19:13136241..13136258,+!p7@NFIX!0.73!6.04!NFIX;;chr21:36260773..36260804,-!p7@RUNX1!0.73!6.04!RUNX1;;chr17:59477233..59477263,+!p1@TBX2!0.72!14.41!TBX2;;chr2:121493425..121493474,+!p1@GLI2!0.72!10.23!GLI2;;chr12:66218443..66218461,+!p8@HMGA2!0.72!5.58!HMGA2;;chr20:30193083..30193098,+!p1@ID1!0.71!375.60!ID1;;chr19:47910182..47910187,-!p3@MEIS3!0.71!4.18!MEIS3;;chr10:77161533..77161546,-!p2@ZNF503!0.70!17.66!ZNF503;;chr12:53856284..53856299,+!p3@PCBP2!0.70!12.55!PCBP2;;chr12:66218378..66218401,+!p6@HMGA2!0.70!6.51!HMGA2;;chr12:54447599..54447630,+!p3@HOXC4!0.70!5.11!HOXC4;;chr10:77161504..77161530,-!p1@ZNF503!0.69!59.50!ZNF503;;chr1:151032782..151032801,+!p4@MLLT11!0.69!8.37!MLLT11;;chr14:62203595..62203676,+!p4@HIF1A!0.69!7.90!HIF1A;;chr19:52074502..52074587,+!p1@ZNF175!0.68!15.34!ZNF175;;chr21:36260295..36260310,-!p3@RUNX1!0.68!6.51!RUNX1;;chr12:80085061..80085119,-!p6@PAWR!0.68!6.51!PAWR;;chr17:38256822..38256851,-!p1@NR1D1!0.67!33.00!NR1D1;;chr2:85981222..85981259,+!p2@ATOH8!0.67!6.51!ATOH8;;chr8:145159846..145159889,+!p6@MAF1!0.67!5.58!MAF1;;chr7:150945865..150945896,-!p4@SMARCD3!0.67!3.72!SMARCD3;;chr7:27183263..27183284,-!p2@HOXA5!0.67!3.72!HOXA5;;chr2:19558327..19558334,-!p2@OSR1!0.67!3.72!OSR1;;chr17:46671108..46671147,-!p1@HOXB5!0.67!3.72!HOXB5;;chr11:125034605..125034636,+!p2@PKNOX2!0.67!3.72!PKNOX2;;chr11:46333979..46333991,+!p7@CREB3L1!0.67!3.72!CREB3L1;;chr12:10870927..10870966,-!p5@CSDA!0.67!3.72!CSDA;;chr12:66358080..66358094,+!p15@HMGA2!0.67!3.72!HMGA2;;chr1:170632115..170632136,+!p9@PRRX1!0.67!3.72!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.67!3.72!PRRX1;;chr3:52001396..52001425,-!p4@PCBP4!0.66!6.97!PCBP4;;chr17:46655704..46655718,-!p2@HOXB4!0.65!5.58!HOXB4;;chr1:8934931..8934947,-!p4@ENO1!0.64!12.55!ENO1;;chr18:3450293..3450304,+!p4@TGIF1!0.64!9.30!TGIF1;;chr19:45261550..45261641,+!p6@BCL3!0.64!6.04!BCL3;;chr19:45260775..45260838,+!p5@BCL3!0.64!4.65!BCL3;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.63!38.58!GLIS2;;chr17:1959369..1959388,+!p2@HIC1!0.63!9.76!HIC1;;chr17:38256799..38256815,-!p3@NR1D1!0.63!6.51!NR1D1;;chr1:221052776..221052799,+!p1@HLX!0.63!6.51!HLX;;chr9:14307229..14307286,-!p10@NFIB!0.63!3.72!NFIB;;chr9:16705069..16705086,-!p3@BNC2!0.63!3.25!BNC2;;chr8:25902876..25902936,-!p1@EBF2!0.63!3.25!EBF2;;chr2:113994526..113994556,-!p3@PAX8!0.63!3.25!PAX8;;chr19:52076425..52076440,+!p2@ZNF175!0.63!3.25!ZNF175;;chr1:170632723..170632739,+!p8@PRRX1!0.63!3.25!PRRX1;;chr11:34642612..34642646,+!p1@EHF!0.63!3.25!EHF;;chr11:46332679..46332695,+!p12@CREB3L1!0.63!3.25!CREB3L1;;chr15:37392724..37392757,-!p1@MEIS2!0.62!17.20!MEIS2;;chr12:48298765..48298783,-!p2@VDR!0.62!7.44!VDR;;chr17:46126136..46126152,+!p1@NFE2L1!0.61!188.73!NFE2L1;;chr9:35732514..35732530,+!p5@CREB3!0.61!4.65!CREB3;;chr12:124873357..124873401,-!p1@NCOR2!0.60!42.30!NCOR2;;chr14:62162258..62162269,+!p2@HIF1A!0.60!34.86!HIF1A;;chr3:178789522..178789564,-!p2@ZMAT3!0.60!26.50!ZMAT3;;chr12:80085255..80085284,-!p9@PAWR!0.60!4.65!PAWR;;chr11:65686855..65686946,+!p1@DRAP1!0.59!270.08!DRAP1;;chr6:34204921..34204939,+!p3@HMGA1!0.59!107.84!HMGA1;;chr1:151032860..151032918,+!p1@MLLT11!0.59!42.30!MLLT11;;chr22:38598086..38598105,+!p1@MAFF!0.59!37.19!MAFF;;chr4:26322373..26322393,+!p4@RBPJ!0.59!4.65!RBPJ;;chr12:66218573..66218596,+!p7@HMGA2!0.59!4.65!HMGA2;;chr15:96869114..96869160,+!p11@NR2F2!0.59!4.18!NR2F2;;chr8:49833978..49833996,-!p1@SNAI2!0.58!71.12!SNAI2;;chr20:48599506..48599526,+!p1@SNAI1!0.58!21.85!SNAI1;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.58!16.27!ZNF20;;chr7:150945754..150945789,-!p2@SMARCD3!0.58!10.23!SMARCD3;;chr4:26322267..26322334,+!p3@RBPJ!0.58!7.90!RBPJ;;chr18:19749517..19749531,+!p3@GATA6!0.58!5.58!GATA6;;chr11:65687882..65687902,+!p10@DRAP1!0.58!4.18!DRAP1;;chr11:8102846..8102892,+!p1@TUB!0.58!4.18!TUB;;chr11:46299186..46299195,+!p3@CREB3L1!0.58!3.25!CREB3L1;;chr12:66218420..66218439,+!p12@HMGA2!0.58!2.79!HMGA2;;chr12:66357214..66357233,+!p13@HMGA2!0.58!2.79!HMGA2;;chr13:37494306..37494324,-!p4@SMAD9!0.58!2.79!SMAD9;;chr14:62214151..62214164,+!p11@HIF1A!0.58!2.79!HIF1A;;chr2:172967242..172967265,-!p2@DLX2!0.58!2.79!DLX2;;chr2:172967276..172967296,-!p3@DLX2!0.58!2.79!DLX2;;chr14:75894714..75894733,+!p1@JDP2!0.57!95.76!JDP2;;chr14:24837368..24837401,+!p1@NFATC4!0.57!7.44!NFATC4;;chr15:57511609..57511651,+!p2@TCF12!0.57!5.11!TCF12;;chr17:3571887..3571918,-!p2@TAX1BP3!0.56!36.72!TAX1BP3;;chr20:42543506..42543549,+!p2@TOX2!0.56!7.44!TOX2;;chr3:25469724..25469773,+!p1@RARB!0.56!4.18!RARB;;chr3:170076314..170076334,+!p2@SKIL!0.56!3.72!SKIL;;chr15:96869222..96869251,+!p18@NR2F2!0.56!3.25!NR2F2;;chr11:65686776..65686787,+!p9@DRAP1!0.56!3.25!DRAP1;;chr11:65667846..65667868,-!p1@FOSL1!0.55!85.07!FOSL1;;chr5:321810..321877,+!p1@AHRR!0.55!9.76!AHRR;;chr7:19157248..19157268,-!p1@TWIST1!0.55!8.37!TWIST1;;chr5:43067636..43067674,+!p6@ZNF131!0.55!3.72!ZNF131;;chr19:50431999..50432026,+!p4@ATF5!0.55!3.72!ATF5;;chr1:205592857..205592880,-!p6@ELK4!0.54!4.65!ELK4;;chr3:71630690..71630750,-!p11@FOXP1!0.54!4.65!FOXP1;;chr8:72756023..72756055,-!p6@MSC!0.54!3.25!MSC;;chr12:57914286..57914304,-!p1@DDIT3!0.53!113.42!DDIT3;;chr17:47492252..47492265,-!p2@PHB!0.53!12.09!PHB;;chr14:61116183..61116208,-!p1@SIX1!0.53!11.16!SIX1;;chr8:72756063..72756125,-!p1@MSC!0.53!5.58!MSC;;chr14:61191049..61191080,-!p2@SIX4!0.53!4.65!SIX4;;chr4:146436110..146436135,+!p6@SMAD1!0.53!3.72!SMAD1;;chr22:30163056..30163067,-!p3@ZMAT5!0.53!3.25!ZMAT5;;chr17:46622440..46622477,-!p5@HOXB2!0.53!2.79!HOXB2;;chr18:45456930..45456967,-!p2@SMAD2!0.52!16.27!SMAD2;;chr6:106534192..106534224,+!p1@PRDM1!0.52!7.90!PRDM1;;chr8:72756267..72756296,-!p4@MSC!0.52!3.72!MSC;;chr18:51690935..51690957,-!p8@MB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|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 34: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
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Line 41: Line 60:
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Line 56: Line 78:
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Line 68: Line 91:
|sample_ethnicity=A
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lumen;1.14886284168856e-66!GO:0031974;membrane-enclosed lumen;1.14886284168856e-66!GO:0005634;nucleus;5.28984759713082e-64!GO:0003723;RNA binding;7.1697667505294e-62!GO:0005840;ribosome;2.26458144476778e-59!GO:0006412;translation;8.03690592774127e-58!GO:0044428;nuclear part;2.47291423325094e-57!GO:0003735;structural constituent of ribosome;3.63566093920471e-54!GO:0044429;mitochondrial part;1.98807449941444e-53!GO:0019538;protein metabolic process;4.86494609676002e-50!GO:0044249;cellular biosynthetic process;1.95450215891038e-49!GO:0043234;protein complex;4.77187069455418e-48!GO:0005829;cytosol;1.53220996799413e-47!GO:0009058;biosynthetic process;4.42194936942401e-46!GO:0015031;protein transport;5.12179831307473e-46!GO:0033279;ribosomal subunit;7.76933165895664e-46!GO:0044260;cellular macromolecule metabolic process;8.81542683535207e-46!GO:0044267;cellular protein metabolic process;4.63269248272623e-45!GO:0033036;macromolecule localization;1.8526113689458e-43!GO:0010467;gene 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process;4.80517896346113e-31!GO:0008380;RNA splicing;5.94480236590257e-31!GO:0019866;organelle inner membrane;6.05123354162454e-30!GO:0005743;mitochondrial inner membrane;6.43691876312268e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.08669946028316e-29!GO:0006886;intracellular protein transport;8.26589528709837e-29!GO:0044445;cytosolic part;1.88232719133212e-27!GO:0006397;mRNA processing;3.56367232417231e-27!GO:0043228;non-membrane-bound organelle;1.03009939420684e-26!GO:0043232;intracellular non-membrane-bound organelle;1.03009939420684e-26!GO:0065003;macromolecular complex assembly;1.37649058147464e-26!GO:0006996;organelle organization and biogenesis;2.62870407650446e-26!GO:0006119;oxidative phosphorylation;6.47858515221601e-25!GO:0015934;large ribosomal subunit;2.18281002972022e-24!GO:0044455;mitochondrial membrane part;4.23326813340819e-24!GO:0022607;cellular component assembly;4.56161274454785e-24!GO:0005654;nucleoplasm;5.53943536681275e-24!GO:0015935;small ribosomal subunit;1.54927269454545e-22!GO:0031980;mitochondrial lumen;6.07343156541986e-22!GO:0005759;mitochondrial matrix;6.07343156541986e-22!GO:0051649;establishment of cellular localization;7.6908791674579e-22!GO:0005681;spliceosome;1.07607109128904e-21!GO:0051641;cellular localization;1.24826255061222e-21!GO:0044451;nucleoplasm part;3.68947245020532e-20!GO:0006512;ubiquitin cycle;9.86420153083535e-20!GO:0006457;protein folding;1.90325166666405e-19!GO:0005746;mitochondrial respiratory chain;2.50702365418644e-19!GO:0051186;cofactor metabolic process;4.39083756254326e-19!GO:0022618;protein-RNA complex assembly;1.88115092024892e-18!GO:0000166;nucleotide binding;1.99976147265805e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.90868884652673e-18!GO:0003676;nucleic acid binding;4.39070092376724e-18!GO:0016462;pyrophosphatase activity;4.99554756892699e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;5.47716327918422e-18!GO:0017111;nucleoside-triphosphatase activity;6.25173068940016e-18!GO:0016874;ligase activity;6.38649659561029e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.27315994771989e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.32122914698286e-17!GO:0006259;DNA metabolic process;3.39861315356778e-17!GO:0008135;translation factor activity, nucleic acid binding;4.422573152865e-17!GO:0008134;transcription factor binding;4.422573152865e-17!GO:0050136;NADH dehydrogenase (quinone) activity;8.72136492322548e-17!GO:0003954;NADH dehydrogenase activity;8.72136492322548e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.72136492322548e-17!GO:0005761;mitochondrial ribosome;1.24153694097237e-16!GO:0000313;organellar ribosome;1.24153694097237e-16!GO:0016070;RNA metabolic process;1.56096614211641e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.80771213318616e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.04622683251775e-16!GO:0048193;Golgi vesicle transport;2.55431748227442e-15!GO:0005730;nucleolus;4.76093975835402e-15!GO:0042775;organelle ATP synthesis coupled electron transport;6.0312505174683e-15!GO:0042773;ATP synthesis coupled electron transport;6.0312505174683e-15!GO:0005794;Golgi apparatus;8.10183624235812e-15!GO:0030964;NADH dehydrogenase complex (quinone);8.30578076576163e-15!GO:0045271;respiratory chain complex I;8.30578076576163e-15!GO:0005747;mitochondrial respiratory chain complex I;8.30578076576163e-15!GO:0006605;protein targeting;8.52825786461046e-15!GO:0006732;coenzyme metabolic process;1.40511814020341e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.63946235863554e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.78373316047208e-14!GO:0044265;cellular macromolecule catabolic process;6.94329240081657e-14!GO:0016192;vesicle-mediated transport;7.98363514228866e-14!GO:0044248;cellular catabolic process;1.42477916139607e-13!GO:0032553;ribonucleotide binding;1.65246457533635e-13!GO:0032555;purine ribonucleotide binding;1.65246457533635e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.73519834151994e-13!GO:0019941;modification-dependent protein catabolic process;2.25021964312093e-13!GO:0043632;modification-dependent macromolecule catabolic process;2.25021964312093e-13!GO:0048770;pigment granule;2.72628618848754e-13!GO:0042470;melanosome;2.72628618848754e-13!GO:0006511;ubiquitin-dependent protein catabolic process;3.09944994426712e-13!GO:0017076;purine nucleotide binding;3.24792364378102e-13!GO:0051082;unfolded protein binding;3.94489266966046e-13!GO:0009055;electron carrier activity;3.96773504062409e-13!GO:0044257;cellular protein catabolic process;4.77678161137743e-13!GO:0043285;biopolymer catabolic process;1.44904553449472e-12!GO:0003743;translation initiation factor activity;1.44904553449472e-12!GO:0043412;biopolymer modification;1.53902021033721e-12!GO:0006413;translational initiation;2.36387792191734e-12!GO:0009259;ribonucleotide metabolic process;3.11751486077002e-12!GO:0003712;transcription cofactor activity;3.87216286097224e-12!GO:0009057;macromolecule catabolic process;3.87216286097224e-12!GO:0012505;endomembrane system;6.09742483205309e-12!GO:0042254;ribosome biogenesis and assembly;8.51365969937268e-12!GO:0006163;purine nucleotide metabolic process;9.43228630927053e-12!GO:0009150;purine ribonucleotide metabolic process;1.00208531149535e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;1.50593632837397e-11!GO:0000375;RNA splicing, via transesterification reactions;1.50593632837397e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.50593632837397e-11!GO:0003924;GTPase activity;1.72135158764589e-11!GO:0006464;protein modification process;1.86514682653714e-11!GO:0007049;cell cycle;2.2930096146357e-11!GO:0012501;programmed cell death;4.38601387058473e-11!GO:0009260;ribonucleotide biosynthetic process;4.42262007067203e-11!GO:0009199;ribonucleoside triphosphate metabolic process;6.03440778521414e-11!GO:0006164;purine nucleotide biosynthetic process;6.18507320915647e-11!GO:0009152;purine ribonucleotide biosynthetic process;6.21651172015471e-11!GO:0030163;protein catabolic process;8.5557586613743e-11!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.87813191661708e-11!GO:0009144;purine nucleoside triphosphate metabolic process;8.87813191661708e-11!GO:0009141;nucleoside triphosphate metabolic process;9.1338926677416e-11!GO:0006915;apoptosis;1.10025019357301e-10!GO:0043687;post-translational protein modification;1.19427673496993e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.65696034505012e-10!GO:0006446;regulation of translational initiation;1.69810622834192e-10!GO:0005783;endoplasmic reticulum;1.98046950129641e-10!GO:0051188;cofactor biosynthetic process;2.32585545785178e-10!GO:0006974;response to DNA damage stimulus;4.47400087917314e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.52148445489405e-10!GO:0008219;cell death;6.21023154648803e-10!GO:0016265;death;6.21023154648803e-10!GO:0009142;nucleoside triphosphate biosynthetic process;6.75227625187205e-10!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.75227625187205e-10!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.01513388511435e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.01513388511435e-09!GO:0008639;small protein conjugating enzyme activity;1.26308630222008e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.70285961073181e-09!GO:0046034;ATP metabolic process;2.04419501653524e-09!GO:0048523;negative regulation of cellular process;2.05546628055269e-09!GO:0005793;ER-Golgi intermediate compartment;2.49978938454642e-09!GO:0005525;GTP binding;2.61328277733024e-09!GO:0008565;protein transporter activity;2.85813446681706e-09!GO:0015986;ATP synthesis coupled proton transport;3.09303144219382e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.09303144219382e-09!GO:0004842;ubiquitin-protein ligase activity;3.16509643450612e-09!GO:0016491;oxidoreductase activity;3.50678639926624e-09!GO:0019787;small conjugating protein ligase activity;3.6640363953176e-09!GO:0030120;vesicle coat;4.06856029363375e-09!GO:0030662;coated vesicle membrane;4.06856029363375e-09!GO:0006913;nucleocytoplasmic transport;4.98766764866421e-09!GO:0006366;transcription from RNA polymerase II promoter;5.13465241767672e-09!GO:0009060;aerobic respiration;5.22293699240292e-09!GO:0006399;tRNA metabolic process;5.90847960518966e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.30948105674401e-09!GO:0051169;nuclear transport;8.39360200528261e-09!GO:0006888;ER to Golgi vesicle-mediated transport;9.61833238204762e-09!GO:0045333;cellular respiration;1.51491074291018e-08!GO:0009117;nucleotide metabolic process;1.67728098822817e-08!GO:0050794;regulation of cellular process;1.72367140094667e-08!GO:0032561;guanyl ribonucleotide binding;1.92122799669147e-08!GO:0019001;guanyl nucleotide binding;1.92122799669147e-08!GO:0006754;ATP biosynthetic process;2.04165984156945e-08!GO:0006753;nucleoside phosphate metabolic process;2.04165984156945e-08!GO:0016881;acid-amino acid ligase activity;2.17392927020298e-08!GO:0005524;ATP binding;2.38384880440373e-08!GO:0048475;coated membrane;3.28403400347122e-08!GO:0030117;membrane coat;3.28403400347122e-08!GO:0032559;adenyl ribonucleotide binding;3.42282018089627e-08!GO:0022402;cell cycle process;3.63606945481013e-08!GO:0007005;mitochondrion organization and biogenesis;3.73770426177198e-08!GO:0017038;protein import;3.74304514901249e-08!GO:0016604;nuclear body;5.80167596626204e-08!GO:0009108;coenzyme biosynthetic process;5.96570954394782e-08!GO:0030554;adenyl nucleotide binding;6.63084304183273e-08!GO:0009056;catabolic process;6.9680544659609e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.9680544659609e-08!GO:0004812;aminoacyl-tRNA ligase activity;6.9680544659609e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.9680544659609e-08!GO:0048519;negative regulation of biological process;7.58301889972616e-08!GO:0051246;regulation of protein metabolic process;7.86570277024871e-08!GO:0006281;DNA repair;9.80058941971673e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;9.93388580656196e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.11026485122057e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.26550579087623e-07!GO:0043038;amino acid activation;1.26550579087623e-07!GO:0006418;tRNA aminoacylation for protein translation;1.26550579087623e-07!GO:0043039;tRNA aminoacylation;1.26550579087623e-07!GO:0051187;cofactor catabolic process;1.31842920600848e-07!GO:0019829;cation-transporting ATPase activity;1.65134342986683e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.7787108723407e-07!GO:0009719;response to endogenous stimulus;1.92287306507854e-07!GO:0005768;endosome;1.92287306507854e-07!GO:0003714;transcription corepressor activity;2.18545136026179e-07!GO:0016072;rRNA metabolic process;2.37214629509202e-07!GO:0006364;rRNA processing;2.6705438087558e-07!GO:0006099;tricarboxylic acid cycle;2.80796445697886e-07!GO:0046356;acetyl-CoA catabolic process;2.80796445697886e-07!GO:0045259;proton-transporting ATP synthase complex;2.86970120621435e-07!GO:0005667;transcription factor complex;2.95873933095294e-07!GO:0006323;DNA packaging;2.99528669682611e-07!GO:0006091;generation of precursor metabolites and energy;3.37280813917953e-07!GO:0043067;regulation of programmed cell death;3.83208768094988e-07!GO:0000074;regulation of progression through cell cycle;4.30301503656552e-07!GO:0051726;regulation of cell cycle;4.47116434220612e-07!GO:0044432;endoplasmic reticulum part;4.51045861308001e-07!GO:0009109;coenzyme catabolic process;5.74697502933281e-07!GO:0006084;acetyl-CoA metabolic process;6.62204919764524e-07!GO:0000278;mitotic cell cycle;6.69548923634717e-07!GO:0042981;regulation of apoptosis;6.71891681145773e-07!GO:0044431;Golgi apparatus part;9.17686737675383e-07!GO:0065004;protein-DNA complex assembly;9.52593897205472e-07!GO:0005762;mitochondrial large ribosomal subunit;1.43492333607462e-06!GO:0000315;organellar large ribosomal subunit;1.43492333607462e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.45408795039222e-06!GO:0006461;protein complex assembly;1.52446772180877e-06!GO:0005635;nuclear envelope;1.52446772180877e-06!GO:0003697;single-stranded DNA binding;1.5700206429609e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.60741824104702e-06!GO:0016887;ATPase activity;1.71637121542127e-06!GO:0016853;isomerase activity;1.71637121542127e-06!GO:0006752;group transfer coenzyme metabolic process;1.73786082652942e-06!GO:0016740;transferase activity;1.87030551377853e-06!GO:0042623;ATPase activity, coupled;1.87251663978092e-06!GO:0031324;negative regulation of cellular metabolic process;1.99511318679997e-06!GO:0051276;chromosome organization and biogenesis;2.10850360029001e-06!GO:0065002;intracellular protein transport across a membrane;2.2898716694426e-06!GO:0031965;nuclear membrane;2.65951522812171e-06!GO:0050789;regulation of biological process;2.72280031361518e-06!GO:0016607;nuclear speck;2.78765794093064e-06!GO:0031252;leading edge;2.78765794093064e-06!GO:0032446;protein modification by small protein conjugation;2.79457516686816e-06!GO:0008026;ATP-dependent helicase activity;3.37578741183965e-06!GO:0043069;negative regulation of programmed cell death;3.60802159053277e-06!GO:0006916;anti-apoptosis;3.713283570418e-06!GO:0016564;transcription repressor activity;3.91643643203492e-06!GO:0043566;structure-specific DNA binding;4.52250516071144e-06!GO:0006260;DNA replication;4.64648724697851e-06!GO:0016567;protein ubiquitination;4.86281004575239e-06!GO:0016563;transcription activator activity;5.78124531751197e-06!GO:0044453;nuclear membrane part;5.89315002101525e-06!GO:0043066;negative regulation of apoptosis;6.03836463644317e-06!GO:0000245;spliceosome assembly;7.86222144122855e-06!GO:0005798;Golgi-associated vesicle;8.04237438494969e-06!GO:0000151;ubiquitin ligase complex;8.44676907561185e-06!GO:0006793;phosphorus metabolic process;8.68869035352563e-06!GO:0006796;phosphate metabolic process;8.68869035352563e-06!GO:0019843;rRNA binding;8.87277700470726e-06!GO:0015980;energy derivation by oxidation of organic compounds;1.10954620575699e-05!GO:0005643;nuclear pore;1.11299440823866e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.20614259908385e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.29099891214431e-05!GO:0004298;threonine endopeptidase activity;1.32442737352849e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.45919605130069e-05!GO:0003713;transcription coactivator activity;1.58937916405291e-05!GO:0009892;negative regulation of metabolic process;1.84564438767389e-05!GO:0005694;chromosome;2.0029696269101e-05!GO:0006333;chromatin assembly or disassembly;2.18435952516906e-05!GO:0016779;nucleotidyltransferase activity;2.22606873539736e-05!GO:0016859;cis-trans isomerase activity;2.37676749175452e-05!GO:0016049;cell growth;2.41602719456882e-05!GO:0045454;cell redox homeostasis;2.42821057350644e-05!GO:0008361;regulation of cell size;2.57639676804669e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.60097762014506e-05!GO:0016310;phosphorylation;2.8213389016541e-05!GO:0046930;pore complex;3.30165347731636e-05!GO:0044440;endosomal part;3.4016339269741e-05!GO:0010008;endosome membrane;3.4016339269741e-05!GO:0000314;organellar small ribosomal subunit;3.41130017110116e-05!GO:0005763;mitochondrial small ribosomal subunit;3.41130017110116e-05!GO:0019222;regulation of metabolic process;3.45950636248564e-05!GO:0004386;helicase activity;3.47484478872298e-05!GO:0000139;Golgi membrane;3.80560960361437e-05!GO:0045786;negative regulation of progression through cell cycle;3.98135377121929e-05!GO:0051170;nuclear import;3.98736046650722e-05!GO:0007264;small GTPase mediated signal transduction;4.07928408290989e-05!GO:0001558;regulation of cell growth;4.51198741555103e-05!GO:0009165;nucleotide biosynthetic process;4.69195769741895e-05!GO:0030036;actin cytoskeleton organization and biogenesis;4.69865829232056e-05!GO:0006606;protein import into nucleus;4.76296012510918e-05!GO:0015630;microtubule cytoskeleton;5.35593788414415e-05!GO:0044427;chromosomal part;6.3016285626052e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.37609760791319e-05!GO:0006334;nucleosome assembly;6.44065227068424e-05!GO:0051789;response to protein stimulus;7.15478834642499e-05!GO:0006986;response to unfolded protein;7.15478834642499e-05!GO:0005753;mitochondrial proton-transporting ATP synthase complex;8.9608732472195e-05!GO:0031497;chromatin assembly;9.28699698005516e-05!GO:0016568;chromatin modification;9.37995998392857e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000103687430808818!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000104530432862212!GO:0005048;signal sequence binding;0.000117018749759564!GO:0006613;cotranslational protein targeting to membrane;0.000117290591508157!GO:0003899;DNA-directed RNA polymerase activity;0.000120377503311636!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000129179758087651!GO:0005788;endoplasmic reticulum lumen;0.000136570169889086!GO:0031968;organelle outer membrane;0.000136570169889086!GO:0005741;mitochondrial outer membrane;0.000136570169889086!GO:0019867;outer membrane;0.000142204485028291!GO:0005769;early endosome;0.000144097297109729!GO:0016023;cytoplasmic membrane-bound vesicle;0.000144483274773135!GO:0043021;ribonucleoprotein binding;0.000145076371322041!GO:0005905;coated pit;0.000149352642480458!GO:0006082;organic acid metabolic process;0.000171621557566067!GO:0031988;membrane-bound vesicle;0.000173021634275247!GO:0005770;late endosome;0.000182596361546565!GO:0019752;carboxylic acid metabolic process;0.000183175836035412!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000191578273165876!GO:0005789;endoplasmic reticulum membrane;0.000207273412517607!GO:0006403;RNA localization;0.0002190531800044!GO:0050657;nucleic acid transport;0.000238232846248635!GO:0051236;establishment of RNA localization;0.000238232846248635!GO:0050658;RNA transport;0.000238232846248635!GO:0006626;protein targeting to mitochondrion;0.000244954475878324!GO:0006414;translational elongation;0.0002728727414828!GO:0043681;protein import into mitochondrion;0.00027556786759927!GO:0006839;mitochondrial transport;0.000284473308280046!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000300888585812341!GO:0005813;centrosome;0.000305248951237589!GO:0030658;transport vesicle membrane;0.000318088579609424!GO:0003724;RNA helicase activity;0.00032261009787141!GO:0030663;COPI coated vesicle membrane;0.00032506700957904!GO:0030126;COPI vesicle coat;0.00032506700957904!GO:0030133;transport vesicle;0.00032558457175929!GO:0016481;negative regulation of transcription;0.000327668871832803!GO:0046483;heterocycle metabolic process;0.000347318533490417!GO:0030029;actin filament-based process;0.000381799773901212!GO:0006612;protein targeting to membrane;0.000382136808542461!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000382996686283859!GO:0051427;hormone receptor binding;0.000401125613824414!GO:0000785;chromatin;0.000406084938179183!GO:0005885;Arp2/3 protein complex;0.000429424336657963!GO:0000087;M phase of mitotic cell cycle;0.000442526105836526!GO:0043284;biopolymer biosynthetic process;0.000450939126048773!GO:0033116;ER-Golgi intermediate compartment membrane;0.000458325371163614!GO:0006891;intra-Golgi vesicle-mediated transport;0.000489413781078975!GO:0022403;cell cycle phase;0.000516814628242297!GO:0007067;mitosis;0.0005399992673986!GO:0007010;cytoskeleton organization and biogenesis;0.000568206480634392!GO:0016787;hydrolase activity;0.000577709533511312!GO:0030137;COPI-coated vesicle;0.0006080700443319!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00066808869424718!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000682152553182001!GO:0031982;vesicle;0.000683335504538227!GO:0007243;protein kinase cascade;0.000686777899479941!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000720574991669225!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000720574991669225!GO:0031410;cytoplasmic vesicle;0.000723581251671515!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000803959421053959!GO:0065009;regulation of a molecular function;0.000805839409163165!GO:0035257;nuclear hormone receptor binding;0.000810186644149244!GO:0051920;peroxiredoxin activity;0.000849340972071571!GO:0008047;enzyme activator activity;0.000864303658533481!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000864879649019421!GO:0043433;negative regulation of transcription factor activity;0.000920379709802159!GO:0045045;secretory pathway;0.000956898434162616!GO:0006383;transcription from RNA polymerase III promoter;0.000982233905348088!GO:0007006;mitochondrial membrane organization and biogenesis;0.000988955103954641!GO:0003729;mRNA binding;0.000993836307797478!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00099628534131143!GO:0015002;heme-copper terminal oxidase activity;0.00099628534131143!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00099628534131143!GO:0004129;cytochrome-c oxidase activity;0.00099628534131143!GO:0030660;Golgi-associated vesicle membrane;0.00103180116164006!GO:0030867;rough endoplasmic reticulum membrane;0.00107328877826308!GO:0051252;regulation of RNA metabolic process;0.00110264043752737!GO:0051301;cell division;0.00113793814001902!GO:0019899;enzyme binding;0.00114833723084738!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00116489595947485!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0011756404681264!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0011756404681264!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0011756404681264!GO:0003746;translation elongation factor activity;0.00117927348155412!GO:0044262;cellular carbohydrate metabolic process;0.00121759436336679!GO:0005815;microtubule organizing center;0.00127584739606069!GO:0030027;lamellipodium;0.0012849781012088!GO:0048522;positive regulation of cellular process;0.00137310782613949!GO:0065007;biological regulation;0.00138740302444384!GO:0043623;cellular protein complex assembly;0.00140720242910749!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00147323808751464!GO:0006778;porphyrin metabolic process;0.00147596406806627!GO:0033013;tetrapyrrole metabolic process;0.00147596406806627!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00149284400885275!GO:0016272;prefoldin complex;0.00150743952735895!GO:0042802;identical protein binding;0.0015099135079498!GO:0030880;RNA polymerase complex;0.00152100594401563!GO:0033673;negative regulation of kinase activity;0.00188382718678617!GO:0006469;negative regulation of protein kinase activity;0.00188382718678617!GO:0030118;clathrin coat;0.00194988472319846!GO:0048487;beta-tubulin binding;0.00204681604538931!GO:0051168;nuclear export;0.00212911122671302!GO:0006520;amino acid metabolic process;0.00217664838734279!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00223996553738791!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00228274299175537!GO:0043488;regulation of mRNA stability;0.00230369131453358!GO:0043487;regulation of RNA stability;0.00230369131453358!GO:0040008;regulation of growth;0.00233016297615373!GO:0015992;proton transport;0.00240266638681251!GO:0008654;phospholipid biosynthetic process;0.00240802521755411!GO:0045941;positive regulation of transcription;0.00248644383293468!GO:0008180;signalosome;0.00248707518568042!GO:0051087;chaperone binding;0.0024877938000539!GO:0051028;mRNA transport;0.00271785051252617!GO:0030127;COPII vesicle coat;0.0027441038447935!GO:0012507;ER to Golgi transport vesicle membrane;0.0027441038447935!GO:0051287;NAD binding;0.00294533935523253!GO:0051348;negative regulation of transferase activity;0.00295356314650998!GO:0042168;heme metabolic process;0.00295876301489398!GO:0006595;polyamine metabolic process;0.00295876301489398!GO:0007050;cell cycle arrest;0.00304532323268501!GO:0031323;regulation of cellular metabolic process;0.003065615917164!GO:0008092;cytoskeletal protein binding;0.00307891031736098!GO:0051329;interphase of mitotic cell cycle;0.00319663516761758!GO:0006818;hydrogen transport;0.00323261665222531!GO:0031072;heat shock protein binding;0.00334076418904091!GO:0015631;tubulin binding;0.00343683518853101!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00344130081745421!GO:0000428;DNA-directed RNA polymerase complex;0.00344130081745421!GO:0030134;ER to Golgi transport vesicle;0.00349410325114655!GO:0005869;dynactin complex;0.00352610359507331!GO:0006354;RNA elongation;0.00354127889589775!GO:0030132;clathrin coat of coated pit;0.00367001690767123!GO:0030659;cytoplasmic vesicle membrane;0.00371421159416717!GO:0048500;signal recognition particle;0.00378404231706504!GO:0008250;oligosaccharyl transferase complex;0.00378700110130623!GO:0045893;positive regulation of transcription, DNA-dependent;0.00421060710164121!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00439700376209615!GO:0008632;apoptotic program;0.00442741358123597!GO:0003711;transcription elongation regulator activity;0.00468739710660967!GO:0035258;steroid hormone receptor binding;0.00506228350519766!GO:0017166;vinculin binding;0.00513843507701984!GO:0008652;amino acid biosynthetic process;0.00517871659547276!GO:0000049;tRNA binding;0.00547630954052493!GO:0006979;response to oxidative stress;0.00550519416852723!GO:0000339;RNA cap binding;0.00557291049473869!GO:0006118;electron transport;0.00578472178111814!GO:0005684;U2-dependent spliceosome;0.00590324305326901!GO:0030041;actin filament polymerization;0.00591691248566566!GO:0008033;tRNA processing;0.00597142137215032!GO:0030125;clathrin vesicle coat;0.00612674286017954!GO:0030665;clathrin coated vesicle membrane;0.00612674286017954!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0061492713989591!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00616700808581941!GO:0016044;membrane organization and biogenesis;0.00623413667409611!GO:0008186;RNA-dependent ATPase activity;0.00652154562215542!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00662213733426438!GO:0006779;porphyrin biosynthetic process;0.00666608606658673!GO:0033014;tetrapyrrole biosynthetic process;0.00666608606658673!GO:0050681;androgen receptor binding;0.00670375505551223!GO:0004576;oligosaccharyl transferase activity;0.00698415216337601!GO:0000096;sulfur amino acid metabolic process;0.00698731045462087!GO:0051325;interphase;0.0069917367277093!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00705060286441943!GO:0018196;peptidyl-asparagine modification;0.00712490499051855!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00712490499051855!GO:0003684;damaged DNA binding;0.00742396372994258!GO:0009116;nucleoside metabolic process;0.00767550291497803!GO:0016197;endosome transport;0.00786117637223557!GO:0006007;glucose catabolic process;0.00803160363188552!GO:0008312;7S RNA binding;0.00807647384619708!GO:0006289;nucleotide-excision repair;0.00814487017721267!GO:0006740;NADPH regeneration;0.00834679903255857!GO:0006098;pentose-phosphate shunt;0.00834679903255857!GO:0046474;glycerophospholipid biosynthetic process;0.00849585162601322!GO:0051128;regulation of cellular component organization and biogenesis;0.00870459426155697!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00888707055489697!GO:0045047;protein targeting to ER;0.00888707055489697!GO:0030119;AP-type membrane coat adaptor complex;0.00904281751135492!GO:0030521;androgen receptor signaling pathway;0.00904281751135492!GO:0044433;cytoplasmic vesicle part;0.00905483995248187!GO:0051540;metal cluster binding;0.00921181883362084!GO:0051536;iron-sulfur cluster binding;0.00921181883362084!GO:0030833;regulation of actin filament polymerization;0.00931830447841909!GO:0045792;negative regulation of cell size;0.00934495671404434!GO:0030308;negative regulation of cell growth;0.00937417975469777!GO:0005862;muscle thin filament tropomyosin;0.00937417975469777!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00953373965583421!GO:0008168;methyltransferase activity;0.0096053921193357!GO:0005791;rough endoplasmic reticulum;0.00967293163331248!GO:0006417;regulation of translation;0.00972066895791274!GO:0001726;ruffle;0.00981876387358997!GO:0032940;secretion by cell;0.00988810949593802!GO:0004674;protein serine/threonine kinase activity;0.00992594484597082!GO:0043022;ribosome binding;0.0100053579487073!GO:0051098;regulation of binding;0.0100530103406396!GO:0005758;mitochondrial intermembrane space;0.0100566894278602!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0101508347467037!GO:0007021;tubulin folding;0.0105162898307262!GO:0008139;nuclear localization sequence binding;0.0105162898307262!GO:0004177;aminopeptidase activity;0.0106840716096488!GO:0003690;double-stranded DNA binding;0.0109438406420723!GO:0045892;negative regulation of transcription, DNA-dependent;0.0110315784074459!GO:0050811;GABA receptor binding;0.011075947889016!GO:0006350;transcription;0.0111587939011154!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0112098343042633!GO:0015399;primary active transmembrane transporter activity;0.0112098343042633!GO:0019206;nucleoside kinase activity;0.0113473605301845!GO:0005096;GTPase activator activity;0.0113927335223809!GO:0048471;perinuclear region of cytoplasm;0.0114322276611927!GO:0006352;transcription initiation;0.0114432320363457!GO:0016741;transferase activity, transferring one-carbon groups;0.0118137521455146!GO:0016363;nuclear matrix;0.0121301058217933!GO:0030503;regulation of cell redox homeostasis;0.0124422125382782!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0124480510055505!GO:0008154;actin polymerization and/or depolymerization;0.0124856658034108!GO:0031901;early endosome membrane;0.0127297909804775!GO:0031529;ruffle organization and biogenesis;0.0127301042098709!GO:0022406;membrane docking;0.012797346511666!GO:0048278;vesicle docking;0.012797346511666!GO:0009112;nucleobase metabolic process;0.0128074097225662!GO:0006783;heme biosynthetic process;0.0130631153479861!GO:0004004;ATP-dependent RNA helicase activity;0.0132831446287243!GO:0000082;G1/S transition of mitotic cell cycle;0.0144794146830551!GO:0006892;post-Golgi vesicle-mediated transport;0.0147611128185061!GO:0005801;cis-Golgi network;0.0151854083293787!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.01610390996033!GO:0051539;4 iron, 4 sulfur cluster binding;0.0163424685559083!GO:0031625;ubiquitin protein ligase binding;0.0165475919148355!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0168672785512558!GO:0005832;chaperonin-containing T-complex;0.0169273303269734!GO:0048144;fibroblast proliferation;0.0169273303269734!GO:0048145;regulation of fibroblast proliferation;0.0169273303269734!GO:0051101;regulation of DNA binding;0.0170434673019359!GO:0048468;cell development;0.0174275183820251!GO:0007242;intracellular signaling cascade;0.0181807066762199!GO:0030131;clathrin adaptor complex;0.018190262681068!GO:0000786;nucleosome;0.018190262681068!GO:0051052;regulation of DNA metabolic process;0.018190262681068!GO:0010468;regulation of gene expression;0.0184309442282502!GO:0050662;coenzyme binding;0.0189065160921011!GO:0006261;DNA-dependent DNA replication;0.0189830049423314!GO:0032984;macromolecular complex disassembly;0.0194877775479714!GO:0006769;nicotinamide metabolic process;0.0196217952879715!GO:0000059;protein import into nucleus, docking;0.0196247804217519!GO:0035035;histone acetyltransferase binding;0.019638355853359!GO:0022890;inorganic cation transmembrane transporter activity;0.019761248336376!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0200097428753681!GO:0000279;M phase;0.0200198052622154!GO:0012506;vesicle membrane;0.020092798915716!GO:0005773;vacuole;0.0201795945882108!GO:0006904;vesicle docking during exocytosis;0.0202259174776888!GO:0043407;negative regulation of MAP kinase activity;0.0204036350185778!GO:0022408;negative regulation of cell-cell adhesion;0.0204714975897307!GO:0008629;induction of apoptosis by intracellular signals;0.0204998709117239!GO:0009119;ribonucleoside metabolic process;0.0211693556256426!GO:0043068;positive regulation of programmed cell death;0.021230218561242!GO:0006402;mRNA catabolic process;0.0214178383233017!GO:0008637;apoptotic mitochondrial changes;0.0215033695401994!GO:0030508;thiol-disulfide exchange intermediate activity;0.0217428433025672!GO:0006749;glutathione metabolic process;0.0217883600871825!GO:0043065;positive regulation of apoptosis;0.0230432665939652!GO:0008022;protein C-terminus binding;0.023536328640596!GO:0031326;regulation of cellular biosynthetic process;0.0236271828428398!GO:0044452;nucleolar part;0.0240007317013601!GO:0006401;RNA catabolic process;0.0243254350391118!GO:0005874;microtubule;0.024400829359736!GO:0000209;protein polyubiquitination;0.0244826369235144!GO:0006914;autophagy;0.0252655043138487!GO:0006739;NADP metabolic process;0.0252663987614982!GO:0043624;cellular protein complex disassembly;0.0255066051888164!GO:0031371;ubiquitin conjugating enzyme complex;0.0255774661068216!GO:0006144;purine base metabolic process;0.0258606477350552!GO:0016251;general RNA polymerase II transcription factor activity;0.026228746552969!GO:0050178;phenylpyruvate tautomerase activity;0.0262398023975698!GO:0006220;pyrimidine nucleotide metabolic process;0.0263103109588239!GO:0009225;nucleotide-sugar metabolic process;0.0267652867213945!GO:0046128;purine ribonucleoside metabolic process;0.0268057404898475!GO:0042278;purine nucleoside metabolic process;0.0268057404898475!GO:0006733;oxidoreduction coenzyme metabolic process;0.0274712979817312!GO:0008538;proteasome activator activity;0.0276228816346308!GO:0005657;replication fork;0.0280209939970418!GO:0006611;protein export from nucleus;0.0280622790811598!GO:0031418;L-ascorbic acid binding;0.028646168375043!GO:0009081;branched chain family amino acid metabolic process;0.0289998235794719!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0290038240620692!GO:0031970;organelle envelope lumen;0.0298564181045273!GO:0008320;protein transmembrane transporter activity;0.0304903795078219!GO:0008601;protein phosphatase type 2A regulator activity;0.0307593764480346!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0308052385491909!GO:0048146;positive regulation of fibroblast proliferation;0.0312302979089284!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0312302979089284!GO:0050790;regulation of catalytic activity;0.0315378925045751!GO:0004448;isocitrate dehydrogenase activity;0.0317683168466028!GO:0048518;positive regulation of biological process;0.032036062209785!GO:0006519;amino acid and derivative metabolic process;0.032036062209785!GO:0009889;regulation of biosynthetic process;0.0331798295177123!GO:0022884;macromolecule transmembrane transporter activity;0.034550262938316!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.034550262938316!GO:0043241;protein complex disassembly;0.0348010278323588!GO:0045926;negative regulation of growth;0.0352599681884013!GO:0032507;maintenance of cellular protein localization;0.0356962109560715!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0359183280744765!GO:0030145;manganese ion binding;0.0359689268690787!GO:0015036;disulfide oxidoreductase activity;0.0361366426902886!GO:0006607;NLS-bearing substrate import into nucleus;0.0364854105511445!GO:0006790;sulfur metabolic process;0.0372077912776892!GO:0006950;response to stress;0.0387117219660279!GO:0045936;negative regulation of phosphate metabolic process;0.0388330146189048!GO:0046365;monosaccharide catabolic process;0.0394792456145102!GO:0016860;intramolecular oxidoreductase activity;0.0395700834732246!GO:0000188;inactivation of MAPK activity;0.0396922745213495!GO:0006767;water-soluble vitamin metabolic process;0.0402066038683687!GO:0005092;GDP-dissociation inhibitor activity;0.040761700756048!GO:0031902;late endosome membrane;0.0407651253983984!GO:0008287;protein serine/threonine phosphatase complex;0.040852264992555!GO:0051059;NF-kappaB binding;0.0408912507572371!GO:0006275;regulation of DNA replication;0.0408912507572371!GO:0016301;kinase activity;0.0408912507572371!GO:0001953;negative regulation of cell-matrix adhesion;0.0408912507572371!GO:0005819;spindle;0.0412084364008722!GO:0030518;steroid hormone receptor signaling pathway;0.0414304369412774!GO:0019318;hexose metabolic process;0.0414304369412774!GO:0031272;regulation of pseudopodium formation;0.0414304369412774!GO:0031269;pseudopodium formation;0.0414304369412774!GO:0031344;regulation of cell projection organization and biogenesis;0.0414304369412774!GO:0031268;pseudopodium organization and biogenesis;0.0414304369412774!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0414304369412774!GO:0031274;positive regulation of pseudopodium formation;0.0414304369412774!GO:0005669;transcription factor TFIID complex;0.0418829757332097!GO:0046822;regulation of nucleocytoplasmic transport;0.0420339286751697!GO:0030032;lamellipodium biogenesis;0.0420358958643445!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.042969799041756!GO:0006405;RNA export from nucleus;0.0435212444376556!GO:0048037;cofactor binding;0.0438326998352957!GO:0005996;monosaccharide metabolic process;0.0441428218948072!GO:0004680;casein kinase activity;0.0443094129561528!GO:0030176;integral to endoplasmic reticulum membrane;0.0445026591694821!GO:0000118;histone deacetylase complex;0.0446019803079488!GO:0030911;TPR domain binding;0.0452078298107091!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0452859965799373!GO:0046870;cadmium ion binding;0.0458360186596249!GO:0031124;mRNA 3'-end processing;0.0458407272416869!GO:0005484;SNAP receptor activity;0.046873029424767!GO:0006096;glycolysis;0.0478059930686519!GO:0009967;positive regulation of signal transduction;0.0480282651469592!GO:0022411;cellular component disassembly;0.0480461996645426!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0482831169613614!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0482831169613614!GO:0000287;magnesium ion binding;0.0483220215391019!GO:0006302;double-strand break repair;0.0483220215391019!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0483220215391019!GO:0033043;regulation of organelle organization and biogenesis;0.0483220215391019!GO:0007265;Ras protein signal transduction;0.04870227677944!GO:0043086;negative regulation of catalytic activity;0.0488621008290153!GO:0008017;microtubule binding;0.0499606170671561
|sample_id=14313
|sample_id=14313
|sample_note=
|sample_note=
Line 75: Line 99:
|sample_tissue=aorta
|sample_tissue=aorta
|top_motifs=HIF1A:1.74863286909;GZF1:1.59034682509;HES1:1.57081864035;GLI1..3:1.39321451267;UFEwm:1.38447353484;XBP1:1.3278240239;TAL1_TCF{3,4,12}:1.28182971698;NKX2-2,8:1.2811474997;ARID5B:1.27719994348;NR3C1:1.27192839246;TFAP4:1.20849871563;HSF1,2:1.1792745156;MAFB:1.15468534621;HMX1:1.13216090957;ZIC1..3:1.08943582617;HAND1,2:1.08108228803;TFCP2:1.08052814487;HOX{A5,B5}:1.06409537223;ALX1:1.01763325136;ESR1:1.00956717228;NFE2L1:0.998986218931;PAX1,9:0.989529771332;GCM1,2:0.978516731923;KLF4:0.976088012987;STAT5{A,B}:0.923661022401;ZNF148:0.9217579465;NKX3-2:0.918844542589;ZBTB6:0.910478212583;POU3F1..4:0.895168616483;SMAD1..7,9:0.863724292746;NR5A1,2:0.847603343342;ALX4:0.824222590703;LHX3,4:0.815625525299;HMGA1,2:0.814157672969;ZNF423:0.800709384375;SRF:0.786156656848;EVI1:0.746825179283;EN1,2:0.726939147793;TBX4,5:0.726880043616;PAX6:0.718418624101;RXR{A,B,G}:0.674000640467;EBF1:0.661247325467;TP53:0.651746091048;HOXA9_MEIS1:0.642968786431;FOXM1:0.618448464561;PDX1:0.617898072905;NR1H4:0.606293117355;ZNF238:0.594205634159;IKZF1:0.584852353265;FOX{I1,J2}:0.557478868356;PAX5:0.527379655607;FOXL1:0.499964248642;bHLH_family:0.477655756418;HOX{A4,D4}:0.467932839306;TEF:0.435691409004;AIRE:0.431903688194;MTF1:0.422598507563;ONECUT1,2:0.403782177937;CRX:0.402297442374;NKX3-1:0.395823056511;TEAD1:0.394603512773;CDC5L:0.39373468398;HLF:0.375079557098;NFE2L2:0.360704625142;POU6F1:0.347834998498;PBX1:0.319703053369;RREB1:0.314820864376;PRDM1:0.311618681552;MZF1:0.310946858916;PATZ1:0.308919561688;GATA4:0.295517971971;FOXQ1:0.288302487377;GTF2I:0.26627069068;TOPORS:0.265042547768;CEBPA,B_DDIT3:0.239474876976;GFI1B:0.238505958368;NHLH1,2:0.225728410088;NFATC1..3:0.221217551671;ELK1,4_GABP{A,B1}:0.210127991205;LMO2:0.179104548613;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.160836409845;SOX17:0.154414378525;AR:0.150746632868;NANOG{mouse}:0.149519965595;ADNP_IRX_SIX_ZHX:0.143588316688;BACH2:0.141315372752;PAX8:0.113760225899;AHR_ARNT_ARNT2:0.111680776723;TFAP2{A,C}:0.1082250947;TLX1..3_NFIC{dimer}:0.0967133884146;TBP:0.0716502422987;REST:0.06196910441;ATF6:0.0447968174365;FOSL2:0.0398468239675;ZNF384:0.0332492959582;HNF1A:0.027183004027;GTF2A1,2:0.022371748511;NR6A1:0.0197105315923;YY1:0.00663384286643;FOS_FOS{B,L1}_JUN{B,D}:-0.0262347574022;SPZ1:-0.0491558079776;NFIX:-0.0661719090053;MYBL2:-0.0670203460805;VSX1,2:-0.0698925697084;RUNX1..3:-0.0740999325616;TFAP2B:-0.0827575235694;LEF1_TCF7_TCF7L1,2:-0.118471631881;STAT2,4,6:-0.118999528343;MTE{core}:-0.124972034189;RFX1:-0.128898078419;POU1F1:-0.140218391538;MYB:-0.145910006708;DMAP1_NCOR{1,2}_SMARC:-0.156897386548;ZNF143:-0.160718063436;XCPE1{core}:-0.170914551717;NFE2:-0.171946670472;ESRRA:-0.196876077325;PPARG:-0.201692767976;EP300:-0.204438851523;HIC1:-0.211680963448;FOXP3:-0.223350404385;RXRA_VDR{dimer}:-0.239701514566;NFKB1_REL_RELA:-0.242419642912;HNF4A_NR2F1,2:-0.256619127657;ATF4:-0.257299317139;PAX3,7:-0.260978841516;MEF2{A,B,C,D}:-0.265393328425;TGIF1:-0.284785397801;T:-0.296688318404;SPI1:-0.302006905438;MYFfamily:-0.31090723037;DBP:-0.318584610211;NRF1:-0.323174953496;NFIL3:-0.323606009911;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.334497924801;ZFP161:-0.368945270976;SNAI1..3:-0.369714705012;NKX6-1,2:-0.372242837227;SOX5:-0.380160125497;PRRX1,2:-0.389862972933;ETS1,2:-0.422657242459;MAZ:-0.422674677301;NKX2-1,4:-0.422984826388;POU2F1..3:-0.427709521712;PAX4:-0.436433145024;GATA6:-0.451365692336;POU5F1:-0.452253963281;JUN:-0.500829219114;ZEB1:-0.504645040123;ZBTB16:-0.525799354318;CREB1:-0.54138397925;RFX2..5_RFXANK_RFXAP:-0.545650126939;HOX{A6,A7,B6,B7}:-0.57502565136;GFI1:-0.604006448725;SPIB:-0.609648018143;PAX2:-0.609906902209;NKX2-3_NKX2-5:-0.635102592684;ELF1,2,4:-0.696484702558;MED-1{core}:-0.714548880051;FOX{D1,D2}:-0.72707179838;RORA:-0.741379417791;SOX2:-0.748521950046;OCT4_SOX2{dimer}:-0.752702620861;FOX{F1,F2,J1}:-0.766437946463;IKZF2:-0.779920651791;ATF2:-0.823582021719;FOXO1,3,4:-0.834376740783;IRF1,2:-0.83941457194;E2F1..5:-0.843867365248;FOXD3:-0.852469919317;EGR1..3:-0.866670718138;BPTF:-0.909902789131;MYOD1:-0.912708509602;NANOG:-0.947478419329;STAT1,3:-0.997314496311;ATF5_CREB3:-0.997772809939;SP1:-1.01481303373;IRF7:-1.02427629911;CUX2:-1.02849368159;SOX{8,9,10}:-1.04033221724;FOXA2:-1.05238225212;BREu{core}:-1.0579659924;CDX1,2,4:-1.12093289859;FOXN1:-1.12390507584;TLX2:-1.17565952491;TFDP1:-1.19072451076;PITX1..3:-1.44857642418;NFY{A,B,C}:-1.51036799249;SREBF1,2:-1.52325035276;FOXP1:-1.55819127161;HBP1_HMGB_SSRP1_UBTF:-1.77413877839;RBPJ:-1.87918647287
|top_motifs=HIF1A:1.74863286909;GZF1:1.59034682509;HES1:1.57081864035;GLI1..3:1.39321451267;UFEwm:1.38447353484;XBP1:1.3278240239;TAL1_TCF{3,4,12}:1.28182971698;NKX2-2,8:1.2811474997;ARID5B:1.27719994348;NR3C1:1.27192839246;TFAP4:1.20849871563;HSF1,2:1.1792745156;MAFB:1.15468534621;HMX1:1.13216090957;ZIC1..3:1.08943582617;HAND1,2:1.08108228803;TFCP2:1.08052814487;HOX{A5,B5}:1.06409537223;ALX1:1.01763325136;ESR1:1.00956717228;NFE2L1:0.998986218931;PAX1,9:0.989529771332;GCM1,2:0.978516731923;KLF4:0.976088012987;STAT5{A,B}:0.923661022401;ZNF148:0.9217579465;NKX3-2:0.918844542589;ZBTB6:0.910478212583;POU3F1..4:0.895168616483;SMAD1..7,9:0.863724292746;NR5A1,2:0.847603343342;ALX4:0.824222590703;LHX3,4:0.815625525299;HMGA1,2:0.814157672969;ZNF423:0.800709384375;SRF:0.786156656848;EVI1:0.746825179283;EN1,2:0.726939147793;TBX4,5:0.726880043616;PAX6:0.718418624101;RXR{A,B,G}:0.674000640467;EBF1:0.661247325467;TP53:0.651746091048;HOXA9_MEIS1:0.642968786431;FOXM1:0.618448464561;PDX1:0.617898072905;NR1H4:0.606293117355;ZNF238:0.594205634159;IKZF1:0.584852353265;FOX{I1,J2}:0.557478868356;PAX5:0.527379655607;FOXL1:0.499964248642;bHLH_family:0.477655756418;HOX{A4,D4}:0.467932839306;TEF:0.435691409004;AIRE:0.431903688194;MTF1:0.422598507563;ONECUT1,2:0.403782177937;CRX:0.402297442374;NKX3-1:0.395823056511;TEAD1:0.394603512773;CDC5L:0.39373468398;HLF:0.375079557098;NFE2L2:0.360704625142;POU6F1:0.347834998498;PBX1:0.319703053369;RREB1:0.314820864376;PRDM1:0.311618681552;MZF1:0.310946858916;PATZ1:0.308919561688;GATA4:0.295517971971;FOXQ1:0.288302487377;GTF2I:0.26627069068;TOPORS:0.265042547768;CEBPA,B_DDIT3:0.239474876976;GFI1B:0.238505958368;NHLH1,2:0.225728410088;NFATC1..3:0.221217551671;ELK1,4_GABP{A,B1}:0.210127991205;LMO2:0.179104548613;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.160836409845;SOX17:0.154414378525;AR:0.150746632868;NANOG{mouse}:0.149519965595;ADNP_IRX_SIX_ZHX:0.143588316688;BACH2:0.141315372752;PAX8:0.113760225899;AHR_ARNT_ARNT2:0.111680776723;TFAP2{A,C}:0.1082250947;TLX1..3_NFIC{dimer}:0.0967133884146;TBP:0.0716502422987;REST:0.06196910441;ATF6:0.0447968174365;FOSL2:0.0398468239675;ZNF384:0.0332492959582;HNF1A:0.027183004027;GTF2A1,2:0.022371748511;NR6A1:0.0197105315923;YY1:0.00663384286643;FOS_FOS{B,L1}_JUN{B,D}:-0.0262347574022;SPZ1:-0.0491558079776;NFIX:-0.0661719090053;MYBL2:-0.0670203460805;VSX1,2:-0.0698925697084;RUNX1..3:-0.0740999325616;TFAP2B:-0.0827575235694;LEF1_TCF7_TCF7L1,2:-0.118471631881;STAT2,4,6:-0.118999528343;MTE{core}:-0.124972034189;RFX1:-0.128898078419;POU1F1:-0.140218391538;MYB:-0.145910006708;DMAP1_NCOR{1,2}_SMARC:-0.156897386548;ZNF143:-0.160718063436;XCPE1{core}:-0.170914551717;NFE2:-0.171946670472;ESRRA:-0.196876077325;PPARG:-0.201692767976;EP300:-0.204438851523;HIC1:-0.211680963448;FOXP3:-0.223350404385;RXRA_VDR{dimer}:-0.239701514566;NFKB1_REL_RELA:-0.242419642912;HNF4A_NR2F1,2:-0.256619127657;ATF4:-0.257299317139;PAX3,7:-0.260978841516;MEF2{A,B,C,D}:-0.265393328425;TGIF1:-0.284785397801;T:-0.296688318404;SPI1:-0.302006905438;MYFfamily:-0.31090723037;DBP:-0.318584610211;NRF1:-0.323174953496;NFIL3:-0.323606009911;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.334497924801;ZFP161:-0.368945270976;SNAI1..3:-0.369714705012;NKX6-1,2:-0.372242837227;SOX5:-0.380160125497;PRRX1,2:-0.389862972933;ETS1,2:-0.422657242459;MAZ:-0.422674677301;NKX2-1,4:-0.422984826388;POU2F1..3:-0.427709521712;PAX4:-0.436433145024;GATA6:-0.451365692336;POU5F1:-0.452253963281;JUN:-0.500829219114;ZEB1:-0.504645040123;ZBTB16:-0.525799354318;CREB1:-0.54138397925;RFX2..5_RFXANK_RFXAP:-0.545650126939;HOX{A6,A7,B6,B7}:-0.57502565136;GFI1:-0.604006448725;SPIB:-0.609648018143;PAX2:-0.609906902209;NKX2-3_NKX2-5:-0.635102592684;ELF1,2,4:-0.696484702558;MED-1{core}:-0.714548880051;FOX{D1,D2}:-0.72707179838;RORA:-0.741379417791;SOX2:-0.748521950046;OCT4_SOX2{dimer}:-0.752702620861;FOX{F1,F2,J1}:-0.766437946463;IKZF2:-0.779920651791;ATF2:-0.823582021719;FOXO1,3,4:-0.834376740783;IRF1,2:-0.83941457194;E2F1..5:-0.843867365248;FOXD3:-0.852469919317;EGR1..3:-0.866670718138;BPTF:-0.909902789131;MYOD1:-0.912708509602;NANOG:-0.947478419329;STAT1,3:-0.997314496311;ATF5_CREB3:-0.997772809939;SP1:-1.01481303373;IRF7:-1.02427629911;CUX2:-1.02849368159;SOX{8,9,10}:-1.04033221724;FOXA2:-1.05238225212;BREu{core}:-1.0579659924;CDX1,2,4:-1.12093289859;FOXN1:-1.12390507584;TLX2:-1.17565952491;TFDP1:-1.19072451076;PITX1..3:-1.44857642418;NFY{A,B,C}:-1.51036799249;SREBF1,2:-1.52325035276;FOXP1:-1.55819127161;HBP1_HMGB_SSRP1_UBTF:-1.77413877839;RBPJ:-1.87918647287
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:14313-155D2;search_select_hide=table117:FF:14313-155D2
}}
}}

Latest revision as of 19:06, 4 June 2020

Name:Smooth Muscle Cells - Aortic, donor0 (cytoplasmic fraction)
Species:Human (Homo sapiens)
Library ID:CNhs12401
Sample type:fractionations and perturbations
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueaorta
dev stage54 years old adult
sexmale
age54
cell typesmooth muscle cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberCA354-R10a
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005454
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12401 CAGE DRX008043 DRR008915
Accession ID Hg19

Library idBAMCTSS
CNhs12401 DRZ000340 DRZ001725
Accession ID Hg38

Library idBAMCTSS
CNhs12401 DRZ011690 DRZ013075
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.205
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.31
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00815
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.3
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.877
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.1
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.159
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.29
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.135
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.0293
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.166
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0563
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.00666
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.3
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.166
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.379
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.285
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.166
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.285
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.715
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.379
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.208
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12401

Jaspar motifP-value
MA0002.20.635
MA0003.10.201
MA0004.10.402
MA0006.10.605
MA0007.10.281
MA0009.10.414
MA0014.10.667
MA0017.10.364
MA0018.23.59426e-5
MA0019.10.4
MA0024.16.22495e-6
MA0025.10.0311
MA0027.10.365
MA0028.10.595
MA0029.10.827
MA0030.10.0625
MA0031.10.164
MA0035.20.734
MA0038.12.95893e-4
MA0039.20.161
MA0040.10.721
MA0041.10.456
MA0042.10.69
MA0043.10.0017
MA0046.10.289
MA0047.20.443
MA0048.10.372
MA0050.11.3873e-7
MA0051.10.00198
MA0052.10.0426
MA0055.10.886
MA0057.10.0639
MA0058.10.227
MA0059.10.232
MA0060.13.84945e-11
MA0061.10.431
MA0062.20.0235
MA0065.20.0454
MA0066.10.0697
MA0067.10.0376
MA0068.10.112
MA0069.10.103
MA0070.10.919
MA0071.10.156
MA0072.10.835
MA0073.10.851
MA0074.10.265
MA0076.10.224
MA0077.10.847
MA0078.10.937
MA0079.20.938
MA0080.21.33627e-4
MA0081.10.118
MA0083.10.056
MA0084.10.67
MA0087.10.434
MA0088.10.208
MA0090.10.0943
MA0091.10.0322
MA0092.10.0751
MA0093.10.385
MA0099.20.218
MA0100.10.291
MA0101.10.215
MA0102.20.0126
MA0103.10.824
MA0104.20.767
MA0105.10.0114
MA0106.10.0247
MA0107.10.283
MA0108.20.401
MA0111.10.786
MA0112.29.90285e-4
MA0113.10.174
MA0114.10.546
MA0115.10.511
MA0116.10.0091
MA0117.10.765
MA0119.10.0489
MA0122.10.956
MA0124.10.252
MA0125.10.0978
MA0131.10.465
MA0135.10.673
MA0136.14.29121e-5
MA0137.20.781
MA0138.20.552
MA0139.10.32
MA0140.10.653
MA0141.10.0262
MA0142.10.341
MA0143.10.802
MA0144.10.609
MA0145.10.169
MA0146.10.114
MA0147.10.754
MA0148.10.788
MA0149.10.305
MA0150.10.664
MA0152.10.383
MA0153.10.799
MA0154.10.0443
MA0155.10.212
MA0156.10.00415
MA0157.10.56
MA0159.10.0495
MA0160.10.534
MA0162.10.0858
MA0163.15.34134e-5
MA0164.10.414
MA0258.10.0263
MA0259.10.301



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12401

Novel motifP-value
10.0749
100.37
1000.901
1010.981
1020.826
1030.0367
1040.539
1050.669
1060.0366
1070.784
1080.223
1090.0359
110.0535
1100.144
1110.295
1120.107
1130.101
1140.00252
1152.7549e-4
1160.12
1170.244
1180.292
1190.251
120.701
1200.0378
1210.716
1220.46
1230.0882
1240.464
1250.951
1260.797
1270.15
1280.0918
1290.364
130.821
1300.631
1310.418
1320.994
1330.564
1340.473
1350.411
1360.982
1370.233
1380.505
1390.0451
140.58
1400.727
1410.825
1420.491
1430.0513
1440.735
1450.733
1460.929
1470.169
1480.375
1490.0504
150.352
1500.514
1510.572
1520.0827
1530.184
1540.582
1550.235
1560.878
1570.834
1580.0964
1590.19
160.037
1600.128
1610.519
1620.913
1630.693
1640.106
1650.5
1660.875
1670.856
1680.217
1690.0211
170.304
180.031
190.0894
20.269
200.567
210.135
220.146
230.0401
240.763
250.841
260.198
270.189
280.4
290.187
30.15
300.69
310.317
321.14807e-4
330.496
340.561
350.344
360.551
370.0584
380.607
390.229
40.615
400.66
410.923
420.287
430.305
440.0249
450.644
460.0277
470.192
480.415
490.345
50.571
500.752
510.497
520.681
530.51
540.538
550.193
560.406
570.55
580.4
590.00844
60.668
600.363
610.539
620.106
630.158
640.321
650.134
660.406
670.396
680.121
690.254
70.774
700.0131
710.0571
720.997
730.0796
740.135
750.197
760.705
770.00441
780.428
793.81072e-5
80.0387
800.798
810.389
820.0294
830.343
840.13
850.0225
860.433
870.164
880.685
890.00352
90.488
900.32
910.222
920.103
930.602
940.0427
950.135
960.768
970.738
980.836
990.0247



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12401


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0002539 (aortic smooth muscle cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001135 (smooth muscle tissue)
0000947 (aorta)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0004573 (systemic artery)
0002385 (muscle tissue)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0004237 (blood vessel smooth muscle)
0004695 (arterial system smooth muscle)
0002049 (vasculature)
0010317 (germ layer / neural crest derived structure)
0002111 (artery smooth muscle tissue)
0007798 (vascular system)
0001015 (musculature)
0004178 (aorta smooth muscle tissue)
0002204 (musculoskeletal system)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0000383 (musculature of body)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)
0000408 (cellular fractionation sample)
0000350 (experimentally modified sample)
0000405 (cytoplasmic fraction sample)
0000168 (human aortic smooth muscle cell sample)
0000664 (Smooth Muscle Cells - Aortic, (cytoplasmic fraction) sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

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