FFCP PHASE1:Hg19::chr10:104155480..104155534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4791 | |EntrezGene=4791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7795 | |HGNC=7795 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009xxc.2_5end | |association_with_transcript=0bp_to_uc009xxc.2_5end | ||
|cluster_id=chr10:104155480..104155534,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_NFKB2_5end | |description=CAGE_peak_2_at_NFKB2_5end | ||
|id=chr10:104155480..104155534,+ | |id=chr10:104155480..104155534,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.54e-37!140;CL:0002087!1.17e-28!119;CL:0002031!1.98e-27!124;CL:0002057!8.81e-26!42;CL:0000766!4.14e-25!76;CL:0000860!8.42e-25!45;CL:0002009!2.47e-21!65;CL:0000557!5.54e-21!71;CL:0002194!3.70e-20!63;CL:0000576!3.70e-20!63;CL:0000040!3.70e-20!63;CL:0000559!3.70e-20!63;CL:0000988!1.08e-19!182;CL:0000839!1.29e-18!70;CL:0000037!2.37e-18!172;CL:0000566!2.37e-18!172;CL:0002032!5.86e-17!165;CL:0000837!5.86e-17!165;CL:0000063!1.59e-14!578;CL:0000003!1.88e-13!722;CL:0000012!9.54e-13!682;CL:0000548!3.51e-12!679;CL:0000004!3.51e-12!679;CL:0000255!3.51e-12!679;CL:0000144!5.05e-11!625;CL:0002371!8.27e-11!591;CL:0000763!2.31e-09!112;CL:0000049!2.31e-09!112;CL:0000945!1.32e-08!24;CL:0000826!1.32e-08!24;CL:0000838!2.81e-08!52;CL:0000542!3.46e-08!53;CL:0000051!3.46e-08!53;CL:0000134!1.64e-07!358;CL:0002320!3.18e-07!365;CL:0000048!4.34e-07!430;CL:0000723!5.14e-07!436;CL:0000034!6.34e-07!444 | |ontology_enrichment_celltype=CL:0000738!3.54e-37!140;CL:0002087!1.17e-28!119;CL:0002031!1.98e-27!124;CL:0002057!8.81e-26!42;CL:0000766!4.14e-25!76;CL:0000860!8.42e-25!45;CL:0002009!2.47e-21!65;CL:0000557!5.54e-21!71;CL:0002194!3.70e-20!63;CL:0000576!3.70e-20!63;CL:0000040!3.70e-20!63;CL:0000559!3.70e-20!63;CL:0000988!1.08e-19!182;CL:0000839!1.29e-18!70;CL:0000037!2.37e-18!172;CL:0000566!2.37e-18!172;CL:0002032!5.86e-17!165;CL:0000837!5.86e-17!165;CL:0000063!1.59e-14!578;CL:0000003!1.88e-13!722;CL:0000012!9.54e-13!682;CL:0000548!3.51e-12!679;CL:0000004!3.51e-12!679;CL:0000255!3.51e-12!679;CL:0000144!5.05e-11!625;CL:0002371!8.27e-11!591;CL:0000763!2.31e-09!112;CL:0000049!2.31e-09!112;CL:0000945!1.32e-08!24;CL:0000826!1.32e-08!24;CL:0000838!2.81e-08!52;CL:0000542!3.46e-08!53;CL:0000051!3.46e-08!53;CL:0000134!1.64e-07!358;CL:0002320!3.18e-07!365;CL:0000048!4.34e-07!430;CL:0000723!5.14e-07!436;CL:0000034!6.34e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.01e-19;33!CL:0002057;2.01e-19;33!CL:0000473;4.54e-17;39!CL:0000234;4.54e-17;39!CL:0000576;5.93e-13;48!CL:0000766;7.17e-12;69!CL:0002087;3.98e-09;104!CL:0000945;1.03e-08;24!CL:0000738;1.45e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.73e-37,136;CL:0002087,6.29e-29,115;CL:0002031,1.38e-27,120;CL:0000473,1.32e-26,48;CL:0000234,1.32e-26,48;CL:0000860,7.51e-26,42;CL:0002057,7.51e-26,42;CL:0000766,1.16e-25,72;CL:0002009,6.94e-22,61;CL:0000557,1.94e-21,67;CL:0002194,1.10e-20,59;CL:0000576,1.10e-20,59;CL:0000040,1.10e-20,59;CL:0000559,1.10e-20,59;CL:0000988,9.35e-20,177;CL:0000839,6.40e-19,66;CL:0000037,2.03e-18,168;CL:0002032,5.06e-17,161;CL:0000837,5.06e-17,161;CL:0000763,2.11e-09,108;CL:0000049,2.11e-09,108;CL:0000945,1.07e-08,24;CL:0000826,1.07e-08,24;CL:0000838,2.72e-08,52;CL:0000542,3.36e-08,53;CL:0000051,3.36e-08,53;CL:0000134,2.54e-07,354;CL:0002320,5.08e-07,361;CL:0000048,7.32e-07,427;CL:0000723,7.59e-07,433;CL:0000034,9.82e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.01e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.26e-25!112;UBERON:0002390!2.66e-23!102;UBERON:0003061!2.66e-23!102;UBERON:0003081!2.48e-21!216;UBERON:0002371!2.78e-18!80;UBERON:0002405!7.87e-17!115;UBERON:0001474!1.91e-15!86;UBERON:0004765!1.11e-12!101;UBERON:0001434!1.11e-12!101;UBERON:0000926!9.83e-11!448;UBERON:0004120!9.83e-11!448;UBERON:0006603!9.83e-11!448;UBERON:0002204!5.25e-09!167 | |ontology_enrichment_uberon=UBERON:0002193!1.26e-25!112;UBERON:0002390!2.66e-23!102;UBERON:0003061!2.66e-23!102;UBERON:0003081!2.48e-21!216;UBERON:0002371!2.78e-18!80;UBERON:0002405!7.87e-17!115;UBERON:0001474!1.91e-15!86;UBERON:0004765!1.11e-12!101;UBERON:0001434!1.11e-12!101;UBERON:0000926!9.83e-11!448;UBERON:0004120!9.83e-11!448;UBERON:0006603!9.83e-11!448;UBERON:0002204!5.25e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.03e-26,108;UBERON:0002390,1.46e-23,98;UBERON:0003061,1.46e-23,98;UBERON:0002405,1.36e-21,93;UBERON:0003081,5.47e-19,203;UBERON:0002371,1.49e-18,76;UBERON:0001474,1.39e-15,82;UBERON:0004765,1.12e-14,90;UBERON:0001434,2.86e-12,100;UBERON:0000926,4.78e-10,315;UBERON:0004120,4.78e-10,315;UBERON:0006603,4.78e-10,315;UBERON:0002204,1.28e-08,167 | |||
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| ||
|short_description=p2@NFKB2 | |short_description=p2@NFKB2 | ||
}} | }} |
Latest revision as of 00:53, 16 September 2015
Short description: | p2@NFKB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFKB2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_uc009xxc.2_5end |
EntrezGene: | NFKB2 |
HGNC: | 7795 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.03e-26 | 108 |
hematopoietic system | 1.46e-23 | 98 |
blood island | 1.46e-23 | 98 |
immune system | 1.36e-21 | 93 |
lateral plate mesoderm | 5.47e-19 | 203 |
bone marrow | 1.49e-18 | 76 |
bone element | 1.39e-15 | 82 |
skeletal element | 1.12e-14 | 90 |
skeletal system | 2.86e-12 | 100 |
mesoderm | 4.78e-10 | 315 |
mesoderm-derived structure | 4.78e-10 | 315 |
presumptive mesoderm | 4.78e-10 | 315 |
musculoskeletal system | 1.28e-08 | 167 |