FFCP PHASE1:Hg19::chr10:17242530..17242542,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1787 | |EntrezGene=1787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2977 | |HGNC=2977 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000451253_5end | |association_with_transcript=23bp_to_ENST00000451253_5end | ||
|cluster_id=chr10:17242530..17242542,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_4_at_TRDMT1_5end | |description=CAGE_peak_4_at_TRDMT1_5end | ||
|id=chr10:17242530..17242542,- | |id=chr10:17242530..17242542,- | ||
|ontology_enrichment_celltype=CL:0000738!6.59e-28!140;CL:0000037!1.88e-24!172;CL:0000566!1.88e-24!172;CL:0000988!3.12e-22!182;CL:0002393!3.34e-19!9;CL:0002397!3.34e-19!9;CL:0002032!4.00e-19!165;CL:0000837!4.00e-19!165;CL:0000557!1.21e-18!71;CL:0000766!1.84e-18!76;CL:0000763!5.40e-17!112;CL:0000049!5.40e-17!112;CL:0002057!6.15e-17!42;CL:0002031!8.76e-17!124;CL:0000134!4.26e-16!358;CL:0002320!2.09e-15!365;CL:0000860!2.13e-15!45;CL:0002087!2.55e-15!119;CL:0000839!1.60e-14!70;CL:0000219!1.08e-13!390;CL:0002009!1.54e-13!65;CL:0000034!2.98e-12!444;CL:0002194!1.92e-11!63;CL:0000576!1.92e-11!63;CL:0000040!1.92e-11!63;CL:0000559!1.92e-11!63;CL:0000048!2.71e-11!430;CL:0000723!7.24e-11!436;CL:0000451!3.12e-09!10;CL:0000767!4.14e-08!3;CL:0000453!1.20e-07!5;CL:0000784!2.30e-07!3;CL:0002274!3.02e-07!5;CL:0000457!3.02e-07!5;CL:0002191!3.02e-07!5;CL:0000097!3.02e-07!5;CL:0000831!3.02e-07!5;CL:0002028!3.02e-07!5;CL:0000875!3.15e-07!3;CL:0002396!3.15e-07!3 | |ontology_enrichment_celltype=CL:0000738!6.59e-28!140;CL:0000037!1.88e-24!172;CL:0000566!1.88e-24!172;CL:0000988!3.12e-22!182;CL:0002393!3.34e-19!9;CL:0002397!3.34e-19!9;CL:0002032!4.00e-19!165;CL:0000837!4.00e-19!165;CL:0000557!1.21e-18!71;CL:0000766!1.84e-18!76;CL:0000763!5.40e-17!112;CL:0000049!5.40e-17!112;CL:0002057!6.15e-17!42;CL:0002031!8.76e-17!124;CL:0000134!4.26e-16!358;CL:0002320!2.09e-15!365;CL:0000860!2.13e-15!45;CL:0002087!2.55e-15!119;CL:0000839!1.60e-14!70;CL:0000219!1.08e-13!390;CL:0002009!1.54e-13!65;CL:0000034!2.98e-12!444;CL:0002194!1.92e-11!63;CL:0000576!1.92e-11!63;CL:0000040!1.92e-11!63;CL:0000559!1.92e-11!63;CL:0000048!2.71e-11!430;CL:0000723!7.24e-11!436;CL:0000451!3.12e-09!10;CL:0000767!4.14e-08!3;CL:0000453!1.20e-07!5;CL:0000784!2.30e-07!3;CL:0002274!3.02e-07!5;CL:0000457!3.02e-07!5;CL:0002191!3.02e-07!5;CL:0000097!3.02e-07!5;CL:0000831!3.02e-07!5;CL:0002028!3.02e-07!5;CL:0000875!3.15e-07!3;CL:0002396!3.15e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002393;6.81e-30;6!CL:0002397;6.81e-30;6!CL:0000767;2.31e-23;3!CL:0000451;6.03e-16;10!CL:0001014;1.67e-15;2!CL:0001016;1.67e-15;2!CL:0000094;4.56e-15;8!CL:0000097;8.99e-14;5!CL:0000453;1.79e-13;5!CL:0000990;7.49e-13;8!CL:0000766;2.19e-11;69!CL:0000840;2.56e-11;5!CL:0000081;5.33e-11;11!CL:0000784;3.01e-10;3!CL:0000037;7.55e-09;1!CL:0001024;7.55e-09;1!CL:0000576;2.16e-08;48!CL:0002032;2.64e-08;1!CL:0000557;2.64e-08;1!CL:0000163;7.24e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.96e-28,9;CL:0002397,3.96e-28,9;CL:0000766,3.08e-25,72;CL:0000763,3.67e-25,108;CL:0000049,3.67e-25,108;CL:0000557,8.85e-24,67;CL:0000767,2.32e-23,3;CL:0000738,2.20e-21,136;CL:0000037,2.71e-20,168;CL:0000988,4.73e-19,177;CL:0000451,5.15e-16,10;CL:0002032,1.21e-15,161;CL:0000837,1.21e-15,161;CL:0000839,1.38e-15,66;CL:0001014,1.45e-15,2;CL:0001016,1.45e-15,2;CL:0000094,4.10e-15,8;CL:0002009,2.21e-14,61;CL:0000097,1.02e-13,5;CL:0002028,1.02e-13,5;CL:0000453,1.57e-13,5;CL:0000990,7.50e-13,8;CL:0000860,2.14e-12,42;CL:0002057,2.14e-12,42;CL:0000840,2.66e-11,5;CL:0001029,2.66e-11,5;CL:0000081,4.94e-11,11;CL:0000473,1.13e-10,48;CL:0000234,1.13e-10,48;CL:0002031,1.95e-10,120;CL:0000784,2.74e-10,3;CL:0002194,3.38e-10,59;CL:0000576,3.38e-10,59;CL:0000040,3.38e-10,59;CL:0000559,3.38e-10,59;CL:0001024,7.56e-09,1;CL:0000163,7.77e-08,9;CL:0000134,2.33e-07,354;CL:0000034,2.47e-07,441;CL:0000219,3.95e-07,386;CL:0002320,3.95e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.13e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.55e-18!102;UBERON:0003061!5.55e-18!102;UBERON:0002371!5.16e-17!80;UBERON:0002193!2.00e-16!112;UBERON:0001474!3.25e-15!86;UBERON:0002384!3.98e-15!375;UBERON:0004765!1.28e-12!101;UBERON:0001434!1.28e-12!101;UBERON:0002405!1.37e-12!115 | |ontology_enrichment_uberon=UBERON:0002390!5.55e-18!102;UBERON:0003061!5.55e-18!102;UBERON:0002371!5.16e-17!80;UBERON:0002193!2.00e-16!112;UBERON:0001474!3.25e-15!86;UBERON:0002384!3.98e-15!375;UBERON:0004765!1.28e-12!101;UBERON:0001434!1.28e-12!101;UBERON:0002405!1.37e-12!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-23,76;UBERON:0001474,1.23e-21,82;UBERON:0002390,5.86e-20,98;UBERON:0003061,5.86e-20,98;UBERON:0004765,1.89e-19,90;UBERON:0002405,1.00e-18,93;UBERON:0002193,8.23e-18,108;UBERON:0001434,3.36e-17,100;UBERON:0002204,2.63e-10,167;UBERON:0003081,5.33e-09,203;UBERON:0002384,8.13e-07,371 | |||
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|short_description=p4@TRDMT1 | |short_description=p4@TRDMT1 | ||
}} | }} |
Latest revision as of 09:58, 17 September 2015
Short description: | p4@TRDMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRDMT1_5end |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | 23bp_to_ENST00000451253_5end |
EntrezGene: | TRDMT1 |
HGNC: | 2977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.41e-23 | 76 |
bone element | 1.23e-21 | 82 |
hematopoietic system | 5.86e-20 | 98 |
blood island | 5.86e-20 | 98 |
skeletal element | 1.89e-19 | 90 |
immune system | 1.00e-18 | 93 |
hemolymphoid system | 8.23e-18 | 108 |
skeletal system | 3.36e-17 | 100 |
musculoskeletal system | 2.63e-10 | 167 |
lateral plate mesoderm | 5.33e-09 | 203 |
connective tissue | 8.13e-07 | 371 |