FFCP PHASE1:Hg19::chr10:104001259..104001274,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:104001259..104001274,-
|short_description=p1@PITX3
|description=CAGE_peak_1_at_PITX3_5end
|association_with_transcript=-28bp_to_ENST00000370002,NM_005029,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5309 | |EntrezGene=5309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9006 | |HGNC=9006 | ||
|TSSclassifier=strong | |||
|UniProt=O75364 | |UniProt=O75364 | ||
|association_with_transcript=-28bp_to_ENST00000370002,NM_005029,uc001kuu.1_5end | |||
|cluster_id=chr10:104001259..104001274,- | |||
|description=CAGE_peak_1_at_PITX3_5end | |||
|id=chr10:104001259..104001274,- | |||
|ontology_enrichment_celltype=CL:0000860!9.61e-08!45;CL:0000064!7.93e-07!3;CL:0005012!7.93e-07!3;CL:0000067!7.93e-07!3;CL:0002304!7.93e-07!3;CL:0002057!8.59e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.72e-21;3!CL:0000067;1.72e-21;3!CL:0005012;1.72e-21;3!CL:0002304;1.72e-21;3!CL:0000515;4.11e-10;3!CL:0000306;6.15e-08;4!CL:0002222;6.15e-08;4!CL:0002224;6.15e-08;4!CL:0000056;8.53e-08;4!CL:0000188;1.13e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.55e-21,3;CL:0000067,1.55e-21,3;CL:0005012,1.55e-21,3;CL:0002304,1.55e-21,3;CL:0000306,6.04e-08,4;CL:0002222,6.04e-08,4;CL:0002224,6.04e-08,4;CL:0000515,8.25e-08,4;CL:0000188,1.28e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;8.53e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!4.12e-10!11;UBERON:0000488!2.14e-08!4;UBERON:0000020!7.23e-08!23;UBERON:0001032!2.01e-07!24;UBERON:0004456!2.01e-07!24;UBERON:0001778!7.93e-07!3;UBERON:0001775!7.93e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.06e-34;16!UBERON:0002036;3.06e-34;16!UBERON:0001778;1.72e-21;3!UBERON:0001775;1.72e-21;3!UBERON:0000020;3.32e-18;23!UBERON:0001032;2.12e-17;24!UBERON:0004456;2.12e-17;24!UBERON:0002385;1.64e-16;31!UBERON:0001015;1.64e-16;31!UBERON:0000383;1.64e-16;31!UBERON:0000488;2.86e-16;4!UBERON:0007625;1.03e-15;11!UBERON:0005090;3.36e-15;2!UBERON:0001630;3.36e-15;2!UBERON:0000341;6.35e-15;2!UBERON:0001801;2.60e-12;14!UBERON:0000970;5.54e-12;20!UBERON:0002104;2.18e-11;21!UBERON:0002203;5.00e-11;6!UBERON:0001768;5.00e-11;6!UBERON:0002200;5.00e-11;6!UBERON:0001723;2.36e-10;3!UBERON:0001033;2.36e-10;3!UBERON:0000019;5.10e-09;19!UBERON:0000047;5.10e-09;19!UBERON:0004088;5.10e-09;19!UBERON:0010230;5.10e-09;19!UBERON:0002426;1.57e-08;1!UBERON:0003831;1.57e-08;1!UBERON:0003898;1.57e-08;1!UBERON:0004830;1.57e-08;1!UBERON:0003830;1.57e-08;1!UBERON:0005175;1.57e-08;1!UBERON:0001774;1.57e-08;1!UBERON:0001103;1.57e-08;1!UBERON:0001389;2.25e-08;1!UBERON:0000026;2.25e-08;1!UBERON:0008784;2.25e-08;1!UBERON:0006058;2.25e-08;1!UBERON:0003663;2.25e-08;1!UBERON:0004256;2.25e-08;1!UBERON:0004708;2.25e-08;1!UBERON:0002101;2.25e-08;1!UBERON:0004709;2.25e-08;1!UBERON:0002529;2.25e-08;1!UBERON:0010538;2.25e-08;1!UBERON:0003661;2.25e-08;1!UBERON:0010890;2.25e-08;1!UBERON:0002471;2.25e-08;1!UBERON:0001383;2.25e-08;1!UBERON:0010758;2.25e-08;1!UBERON:0010707;2.25e-08;1!UBERON:0000978;2.25e-08;1!UBERON:0002103;2.25e-08;1!UBERON:0001665;2.25e-08;1!UBERON:0003823;2.25e-08;1!UBERON:0000154;2.25e-08;1!UBERON:0010709;2.25e-08;1!UBERON:0001456;3.87e-08;21!UBERON:0007029;4.89e-08;1!UBERON:0010077;6.15e-08;4!UBERON:0005389;6.15e-08;4!UBERON:0000484;6.15e-08;4!UBERON:0000965;6.15e-08;4!UBERON:0001803;6.15e-08;4!UBERON:0010371;2.24e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.55e-21,3;UBERON:0001775,1.55e-21,3;UBERON:0000020,1.83e-17,24;UBERON:0001032,1.83e-17,24;UBERON:0004456,1.83e-17,24;UBERON:0000488,2.64e-16,4;UBERON:0007625,9.66e-16,11;UBERON:0005090,3.14e-15,2;UBERON:0001630,3.14e-15,2;UBERON:0000341,6.82e-15,2;UBERON:0001801,2.48e-12,14;UBERON:0000970,1.93e-11,21;UBERON:0002104,1.93e-11,21;UBERON:0002203,4.75e-11,6;UBERON:0001768,4.75e-11,6;UBERON:0002200,4.75e-11,6;UBERON:0001723,2.36e-10,3;UBERON:0001033,2.36e-10,3;UBERON:0010056,2.36e-10,3;UBERON:0001134,1.32e-09,62;UBERON:0002036,1.32e-09,62;UBERON:0003082,1.32e-09,62;UBERON:0002385,2.97e-09,64;UBERON:0001015,2.97e-09,64;UBERON:0000383,2.97e-09,64;UBERON:0000019,1.43e-08,20;UBERON:0000047,1.43e-08,20;UBERON:0010312,1.43e-08,20;UBERON:0004088,1.43e-08,20;UBERON:0010230,1.43e-08,20;UBERON:0003072,1.43e-08,20;UBERON:0004128,1.43e-08,20;UBERON:0003071,1.43e-08,20;UBERON:0002426,1.75e-08,1;UBERON:0003831,1.75e-08,1;UBERON:0003898,1.75e-08,1;UBERON:0004830,1.75e-08,1;UBERON:0003830,1.75e-08,1;UBERON:0005175,1.75e-08,1;UBERON:0001774,1.75e-08,1;UBERON:0001103,1.75e-08,1;UBERON:0010084,1.75e-08,1;UBERON:0005418,1.88e-08,1;UBERON:0001389,1.88e-08,1;UBERON:0000026,1.88e-08,1;UBERON:0008784,1.88e-08,1;UBERON:0006058,1.88e-08,1;UBERON:0003663,1.88e-08,1;UBERON:0004256,1.88e-08,1;UBERON:0004708,1.88e-08,1;UBERON:0002101,1.88e-08,1;UBERON:0004709,1.88e-08,1;UBERON:0002529,1.88e-08,1;UBERON:0010538,1.88e-08,1;UBERON:0003661,1.88e-08,1;UBERON:0010890,1.88e-08,1;UBERON:0002471,1.88e-08,1;UBERON:0001383,1.88e-08,1;UBERON:0004357,1.88e-08,1;UBERON:0004347,1.88e-08,1;UBERON:0005420,1.88e-08,1;UBERON:0005732,1.88e-08,1;UBERON:0010758,1.88e-08,1;UBERON:0010707,1.88e-08,1;UBERON:0000978,1.88e-08,1;UBERON:0002103,1.88e-08,1;UBERON:0001665,1.88e-08,1;UBERON:0003823,1.88e-08,1;UBERON:0000154,1.88e-08,1;UBERON:0010709,1.88e-08,1;UBERON:0005733,1.88e-08,1;UBERON:0005730,1.88e-08,1;UBERON:0002329,3.54e-08,71;UBERON:0003059,3.54e-08,71;UBERON:0007282,3.54e-08,71;UBERON:0004290,3.54e-08,71;UBERON:0009618,3.54e-08,71;UBERON:0007029,4.41e-08,1;UBERON:0003077,4.85e-08,72;UBERON:0007285,4.85e-08,72;UBERON:0010077,6.04e-08,4;UBERON:0005389,6.04e-08,4;UBERON:0000484,6.04e-08,4;UBERON:0002546,6.04e-08,4;UBERON:0000965,6.04e-08,4;UBERON:0001803,6.04e-08,4;UBERON:0003073,6.04e-08,4;UBERON:0005426,6.04e-08,4;UBERON:0007524,6.59e-08,73;UBERON:0001456,9.03e-08,22;UBERON:0000153,1.06e-07,62;UBERON:0007811,1.06e-07,62;UBERON:0007503,2.70e-07,78;UBERON:0000486,9.33e-07,83 | |||
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| ||
|short_description=p1@PITX3 | |||
}} | }} |
Latest revision as of 00:35, 16 September 2015
Short description: | p1@PITX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PITX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000370002, NM_005029, uc001kuu.1_5end |
EntrezGene: | PITX3 |
HGNC: | 9006 |
UniProt: | O75364 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.55e-21 | 3 |
ciliated epithelial cell | 1.55e-21 | 3 |
multi-ciliated epithelial cell | 1.55e-21 | 3 |
non-pigmented ciliary epithelial cell | 1.55e-21 | 3 |
crystallin accumulating cell | 6.04e-08 | 4 |
vertebrate lens cell | 6.04e-08 | 4 |
lens epithelial cell | 6.04e-08 | 4 |
skeletal muscle myoblast | 8.25e-08 | 4 |
cell of skeletal muscle | 1.28e-07 | 9 |