FFCP PHASE1:Hg19::chr10:114885446..114885465,+: Difference between revisions
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|id=chr10:114885446..114885465,+
|short_description=p@chr10:114885446..114885465,+
|description=CAGE_peak_at_chr10:114885446..114885465,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:114885446..114885465,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr10:114885446..114885465,+ | |||
|id=chr10:114885446..114885465,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.71e-27!42;CL:0000860!3.51e-25!45;CL:0002194!1.23e-15!63;CL:0000576!1.23e-15!63;CL:0000040!1.23e-15!63;CL:0000559!1.23e-15!63;CL:0002009!5.86e-15!65;CL:0000766!1.75e-14!76;CL:0000839!1.95e-13!70;CL:0000557!3.69e-13!71;CL:0002393!4.68e-10!9;CL:0002397!4.68e-10!9;CL:0000875!5.64e-09!3;CL:0002396!5.64e-09!3;CL:0000842!6.09e-08!3;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002087!1.27e-07!119;CL:0000738!7.47e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.73e-38;3!CL:0002396;1.73e-38;3!CL:0000576;6.56e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,1.84e-38,3;CL:0002396,1.84e-38,3;CL:0002393,1.24e-22,9;CL:0002397,1.24e-22,9;CL:0000860,6.33e-14,42;CL:0002057,6.33e-14,42;CL:0000473,4.09e-12,48;CL:0000234,4.09e-12,48;CL:0002194,1.42e-09,59;CL:0000576,1.42e-09,59;CL:0000040,1.42e-09,59;CL:0000559,1.42e-09,59;CL:0002009,3.02e-09,61;CL:0000839,1.64e-08,66;CL:0000557,2.24e-08,67;CL:0000766,9.26e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.24e-14;1!CL:0002057;1.34e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;2.61e-26;2!DOID:3493;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.45e-26,2;DOID:3493,1.87e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.13e-13!102;UBERON:0003061!3.13e-13!102;UBERON:0002193!2.39e-11!112;UBERON:0002780!4.48e-11!41;UBERON:0001890!4.48e-11!41;UBERON:0006240!4.48e-11!41;UBERON:0002371!5.57e-11!80;UBERON:0003080!1.01e-10!42;UBERON:0000955!1.56e-10!69;UBERON:0006238!1.56e-10!69;UBERON:0001017!4.56e-10!82;UBERON:0001474!8.61e-10!86;UBERON:0002616!1.12e-09!59;UBERON:0005743!2.48e-09!86;UBERON:0004765!3.91e-09!101;UBERON:0001434!3.91e-09!101;UBERON:0001049!4.86e-09!57;UBERON:0005068!4.86e-09!57;UBERON:0006241!4.86e-09!57;UBERON:0007135!4.86e-09!57;UBERON:0002405!4.64e-08!115;UBERON:0000073!6.45e-08!94;UBERON:0001016!6.45e-08!94;UBERON:0001893!1.62e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;6.24e-14;1!UBERON:0003703;6.24e-14;1!UBERON:0001174;6.24e-14;1!UBERON:0004914;6.24e-14;1!UBERON:0001894;3.70e-08;7!UBERON:0001897;1.16e-07;2!UBERON:0010225;1.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.85e-14,1;UBERON:0003703,5.85e-14,1;UBERON:0001174,5.85e-14,1;UBERON:0004914,5.85e-14,1;UBERON:0001894,3.70e-08,7;UBERON:0006222,3.70e-08,7;UBERON:0001897,1.12e-07,2;UBERON:0010225,1.12e-07,2;UBERON:0002371,2.53e-07,76;UBERON:0002390,3.47e-07,98;UBERON:0003061,3.47e-07,98;UBERON:0001474,9.50e-07,82 | |||
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| ||
|short_description=p@chr10:114885446..114885465,+ | |||
}} | }} |
Latest revision as of 10:33, 23 July 2015
Short description: | p@chr10:114885446..114885465, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:114885446..114885465, + |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.84e-38 | 3 |
CD14-low, CD16-positive monocyte | 1.84e-38 | 3 |
intermediate monocyte | 1.24e-22 | 9 |
CD14-positive, CD16-positive monocyte | 1.24e-22 | 9 |
classical monocyte | 6.33e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.33e-14 | 42 |
defensive cell | 4.09e-12 | 48 |
phagocyte | 4.09e-12 | 48 |
monopoietic cell | 1.42e-09 | 59 |
monocyte | 1.42e-09 | 59 |
monoblast | 1.42e-09 | 59 |
promonocyte | 1.42e-09 | 59 |
macrophage dendritic cell progenitor | 3.02e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.64e-08 | 66 |
granulocyte monocyte progenitor cell | 2.24e-08 | 67 |
myeloid leukocyte | 9.26e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.85e-14 | 1 |
extrahepatic bile duct | 5.85e-14 | 1 |
common bile duct | 5.85e-14 | 1 |
duodenal papilla | 5.85e-14 | 1 |
diencephalon | 3.70e-08 | 7 |
future diencephalon | 3.70e-08 | 7 |
dorsal plus ventral thalamus | 1.12e-07 | 2 |
thalamic complex | 1.12e-07 | 2 |
bone marrow | 2.53e-07 | 76 |
hematopoietic system | 3.47e-07 | 98 |
blood island | 3.47e-07 | 98 |
bone element | 9.50e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.45e-26 | 2 |
signet ring cell adenocarcinoma | 1.87e-07 | 2 |