FFCP PHASE1:Hg19::chr11:58977674..58977688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=440bp_to_AK024358_5end | |association_with_transcript=440bp_to_AK024358_5end | ||
|cluster_id=chr11:58977674..58977688,- | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_1_at_AK024358_5end | |description=CAGE_peak_1_at_AK024358_5end | ||
|id=chr11:58977674..58977688,- | |id=chr11:58977674..58977688,- | ||
|ontology_enrichment_celltype=CL:0002009!2.24e-60!65;CL:0000766!4.84e-60!76;CL:0002057!1.45e-59!42;CL:0002194!6.01e-58!63;CL:0000576!6.01e-58!63;CL:0000040!6.01e-58!63;CL:0000559!6.01e-58!63;CL:0000860!1.71e-54!45;CL:0000557!1.27e-53!71;CL:0000839!2.89e-50!70;CL:0000763!5.05e-46!112;CL:0000049!5.05e-46!112;CL:0000738!6.27e-45!140;CL:0002087!1.80e-40!119;CL:0000037!6.67e-39!172;CL:0000566!6.67e-39!172;CL:0002032!1.76e-36!165;CL:0000837!1.76e-36!165;CL:0000988!2.68e-35!182;CL:0002031!4.25e-35!124;CL:0002393!1.18e-12!9;CL:0002397!1.18e-12!9;CL:0000094!1.34e-08!8;CL:0000134!1.16e-07!358;CL:0002320!3.95e-07!365 | |ontology_enrichment_celltype=CL:0002009!2.24e-60!65;CL:0000766!4.84e-60!76;CL:0002057!1.45e-59!42;CL:0002194!6.01e-58!63;CL:0000576!6.01e-58!63;CL:0000040!6.01e-58!63;CL:0000559!6.01e-58!63;CL:0000860!1.71e-54!45;CL:0000557!1.27e-53!71;CL:0000839!2.89e-50!70;CL:0000763!5.05e-46!112;CL:0000049!5.05e-46!112;CL:0000738!6.27e-45!140;CL:0002087!1.80e-40!119;CL:0000037!6.67e-39!172;CL:0000566!6.67e-39!172;CL:0002032!1.76e-36!165;CL:0000837!1.76e-36!165;CL:0000988!2.68e-35!182;CL:0002031!4.25e-35!124;CL:0002393!1.18e-12!9;CL:0002397!1.18e-12!9;CL:0000094!1.34e-08!8;CL:0000134!1.16e-07!358;CL:0002320!3.95e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-68;33!CL:0002057;1.04e-68;33!CL:0000473;2.98e-68;39!CL:0000234;2.98e-68;39!CL:0000576;1.95e-59;48!CL:0000766;8.88e-47;69!CL:0000763;2.48e-23;100!CL:0002087;1.08e-16;104!CL:0000738;8.88e-16;136!CL:0000235;2.29e-14;6!CL:0002393;6.66e-14;6!CL:0002397;6.66e-14;6!CL:0000094;4.80e-10;8!CL:0000988;3.10e-09;177!CL:0000775;2.52e-08;3!CL:0002619;1.13e-07;3!CL:0000226;3.03e-07;3!CL:0000842;3.03e-07;3!CL:0000081;4.33e-07;11!CL:0000875;4.46e-07;3!CL:0002396;4.46e-07;3!CL:0000219;5.42e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.77e-108,48;CL:0000234,8.77e-108,48;CL:0002009,1.50e-102,61;CL:0000766,1.94e-99,72;CL:0002194,1.30e-98,59;CL:0000576,1.30e-98,59;CL:0000040,1.30e-98,59;CL:0000559,1.30e-98,59;CL:0000860,3.19e-94,42;CL:0002057,3.19e-94,42;CL:0000557,4.13e-92,67;CL:0000839,1.05e-86,66;CL:0000763,8.61e-76,108;CL:0000049,8.61e-76,108;CL:0000738,5.37e-61,136;CL:0002087,7.21e-56,115;CL:0000037,5.27e-53,168;CL:0002031,1.05e-50,120;CL:0002032,1.86e-50,161;CL:0000837,1.86e-50,161;CL:0000988,2.09e-49,177;CL:0002393,3.34e-19,9;CL:0002397,3.34e-19,9;CL:0000134,1.38e-16,354;CL:0002320,6.33e-16,361;CL:0000235,2.87e-14,6;CL:0000219,1.34e-13,386;CL:0000048,8.79e-11,427;CL:0000723,2.14e-10,433;CL:0000094,4.43e-10,8;CL:0000034,6.71e-10,441;CL:0000775,2.29e-08,3;CL:0002619,1.09e-07,3;CL:0000226,2.54e-07,3;CL:0000842,2.54e-07,3;CL:0000081,4.09e-07,11;CL:0000875,4.62e-07,3;CL:0002396,4.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.00e-67;42!CL:0000049;5.40e-21;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.09e-60!102;UBERON:0003061!4.09e-60!102;UBERON:0002193!5.91e-56!112;UBERON:0002371!2.11e-45!80;UBERON:0001474!6.94e-41!86;UBERON:0002405!4.84e-40!115;UBERON:0004765!5.53e-32!101;UBERON:0001434!5.53e-32!101;UBERON:0003081!3.77e-22!216;UBERON:0002204!2.26e-14!167;UBERON:0007023!2.89e-14!115;UBERON:0000178!1.57e-11!15;UBERON:0000179!1.57e-11!15;UBERON:0000463!1.57e-11!15;UBERON:0000926!3.76e-07!448;UBERON:0004120!3.76e-07!448;UBERON:0006603!3.76e-07!448;UBERON:0000479!8.72e-07!787;UBERON:0002384!9.28e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-15;15!UBERON:0000179;3.28e-15;15!UBERON:0000463;3.28e-15;15!UBERON:0002390;2.76e-09;32!UBERON:0002106;8.02e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.06e-96,98;UBERON:0003061,2.06e-96,98;UBERON:0002193,6.43e-86,108;UBERON:0002371,1.66e-79,76;UBERON:0001474,1.27e-72,82;UBERON:0002405,6.80e-70,93;UBERON:0004765,7.30e-65,90;UBERON:0001434,6.76e-57,100;UBERON:0003081,2.35e-40,203;UBERON:0002204,4.23e-28,167;UBERON:0000926,1.03e-19,315;UBERON:0004120,1.03e-19,315;UBERON:0006603,1.03e-19,315;UBERON:0000178,2.33e-15,15;UBERON:0000179,2.33e-15,15;UBERON:0000463,2.33e-15,15;UBERON:0002384,5.05e-15,371;UBERON:0002106,7.29e-07,3;UBERON:0004854,7.29e-07,3;UBERON:0009034,7.29e-07,3;UBERON:0002095,7.29e-07,3;UBERON:0004782,7.29e-07,3;UBERON:0003281,7.29e-07,3;UBERON:0009664,7.29e-07,3;UBERON:0002296,7.29e-07,3;UBERON:0005602,7.29e-07,3;UBERON:0001179,7.29e-07,3;UBERON:0006293,7.29e-07,3 | |||
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|short_description=p1@AK024358 | |short_description=p1@AK024358 | ||
}} | }} |
Latest revision as of 23:08, 23 July 2015
Short description: | p1@AK024358 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK024358_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 440bp_to_AK024358_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.06e-96 | 98 |
blood island | 2.06e-96 | 98 |
hemolymphoid system | 6.43e-86 | 108 |
bone marrow | 1.66e-79 | 76 |
bone element | 1.27e-72 | 82 |
immune system | 6.80e-70 | 93 |
skeletal element | 7.30e-65 | 90 |
skeletal system | 6.76e-57 | 100 |
lateral plate mesoderm | 2.35e-40 | 203 |
musculoskeletal system | 4.23e-28 | 167 |
mesoderm | 1.03e-19 | 315 |
mesoderm-derived structure | 1.03e-19 | 315 |
presumptive mesoderm | 1.03e-19 | 315 |
blood | 2.33e-15 | 15 |
haemolymphatic fluid | 2.33e-15 | 15 |
organism substance | 2.33e-15 | 15 |
connective tissue | 5.05e-15 | 371 |
spleen | 7.29e-07 | 3 |
gastrointestinal system mesentery | 7.29e-07 | 3 |
stomach region | 7.29e-07 | 3 |
mesentery | 7.29e-07 | 3 |
gastrointestinal system serosa | 7.29e-07 | 3 |
mesentery of stomach | 7.29e-07 | 3 |
gut mesentery | 7.29e-07 | 3 |
dorsal mesentery | 7.29e-07 | 3 |
dorsal mesogastrium | 7.29e-07 | 3 |
peritoneal cavity | 7.29e-07 | 3 |
spleen primordium | 7.29e-07 | 3 |