FFCP PHASE1:Hg19::chr10:73588965..73588974,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:73588965..73588974,-
|short_description=p@chr10:73588965..73588974,-
|description=CAGE_peak_at_chr10:73588965..73588974,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:73588965..73588974,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:73588965..73588974,- | |||
|id=chr10:73588965..73588974,- | |||
|ontology_enrichment_celltype=CL:0002057!3.52e-89!42;CL:0000860!1.18e-82!45;CL:0000766!5.10e-76!76;CL:0002194!6.27e-63!63;CL:0000576!6.27e-63!63;CL:0000040!6.27e-63!63;CL:0000559!6.27e-63!63;CL:0002009!9.54e-61!65;CL:0000839!7.91e-56!70;CL:0000557!6.31e-55!71;CL:0000763!5.04e-51!112;CL:0000049!5.04e-51!112;CL:0000738!7.46e-39!140;CL:0002032!3.88e-33!165;CL:0000837!3.88e-33!165;CL:0002393!9.78e-32!9;CL:0002397!9.78e-32!9;CL:0000037!2.27e-31!172;CL:0000566!2.27e-31!172;CL:0002087!3.05e-31!119;CL:0002031!1.26e-29!124;CL:0000988!4.42e-29!182;CL:0000094!4.20e-22!8;CL:0000081!8.85e-16!11;CL:0000775!1.37e-12!3;CL:0000875!2.69e-12!3;CL:0002396!2.69e-12!3;CL:0000767!4.93e-11!3;CL:0000134!9.97e-10!358;CL:0002320!2.39e-09!365;CL:0000219!5.18e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.85e-25;3!CL:0000094;9.92e-25;8!CL:0000875;2.74e-24;3!CL:0002396;2.74e-24;3!CL:0000766;1.25e-22;69!CL:0002393;1.91e-20;6!CL:0002397;1.91e-20;6!CL:0000081;5.87e-18;11!CL:0000576;9.93e-15;48!CL:0000763;9.74e-11;100!CL:0000860;6.98e-10;33!CL:0002057;6.98e-10;33!CL:0000473;8.72e-10;39!CL:0000234;8.72e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.66e-41,9;CL:0002397,4.66e-41,9;CL:0000766,1.67e-38,72;CL:0000860,6.14e-33,42;CL:0002057,6.14e-33,42;CL:0000473,7.80e-33,48;CL:0000234,7.80e-33,48;CL:0002194,9.90e-26,59;CL:0000576,9.90e-26,59;CL:0000040,9.90e-26,59;CL:0000559,9.90e-26,59;CL:0000775,5.86e-25,3;CL:0002009,8.18e-25,61;CL:0000094,1.10e-24,8;CL:0000763,1.24e-24,108;CL:0000049,1.24e-24,108;CL:0000875,2.44e-24,3;CL:0002396,2.44e-24,3;CL:0000839,9.26e-23,66;CL:0000557,2.19e-22,67;CL:0000738,7.13e-19,136;CL:0000081,6.30e-18,11;CL:0002032,2.09e-15,161;CL:0000837,2.09e-15,161;CL:0000037,1.28e-14,168;CL:0000988,1.07e-13,177;CL:0002087,5.43e-12,115;CL:0002031,2.21e-11,120 | |||
|ontology_enrichment_development_v019=CL:0002057;5.98e-23;42!CL:0000049;6.85e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.57e-57!102;UBERON:0003061!5.57e-57!102;UBERON:0002193!5.11e-51!112;UBERON:0002371!8.17e-48!80;UBERON:0001474!6.85e-44!86;UBERON:0004765!4.18e-36!101;UBERON:0001434!4.18e-36!101;UBERON:0002405!1.36e-32!115;UBERON:0003081!3.79e-24!216;UBERON:0002204!2.03e-18!167;UBERON:0000178!2.71e-11!15;UBERON:0000179!2.71e-11!15;UBERON:0000463!2.71e-11!15;UBERON:0002384!7.88e-09!375;UBERON:0000926!2.11e-07!448;UBERON:0004120!2.11e-07!448;UBERON:0006603!2.11e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.95e-18;15!UBERON:0000179;3.95e-18;15!UBERON:0000463;3.95e-18;15!UBERON:0002390;4.50e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.08e-30,98;UBERON:0003061,2.08e-30,98;UBERON:0002193,2.74e-27,108;UBERON:0002371,1.88e-19,76;UBERON:0000178,3.10e-18,15;UBERON:0000179,3.10e-18,15;UBERON:0000463,3.10e-18,15;UBERON:0001474,7.56e-18,82;UBERON:0004765,4.87e-16,90;UBERON:0002405,1.94e-15,93;UBERON:0001434,3.52e-14,100;UBERON:0003081,7.40e-13,203;UBERON:0002204,1.95e-07,167;UBERON:0000926,6.01e-07,315;UBERON:0004120,6.01e-07,315;UBERON:0006603,6.01e-07,315 | |||
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| ||
|short_description=p@chr10:73588965..73588974,- | |||
}} | }} |
Latest revision as of 15:20, 23 July 2015
Short description: | p@chr10:73588965..73588974, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73588965..73588974, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.66e-41 | 9 |
CD14-positive, CD16-positive monocyte | 4.66e-41 | 9 |
myeloid leukocyte | 1.67e-38 | 72 |
classical monocyte | 6.14e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.14e-33 | 42 |
defensive cell | 7.80e-33 | 48 |
phagocyte | 7.80e-33 | 48 |
monopoietic cell | 9.90e-26 | 59 |
monocyte | 9.90e-26 | 59 |
monoblast | 9.90e-26 | 59 |
promonocyte | 9.90e-26 | 59 |
neutrophil | 5.86e-25 | 3 |
macrophage dendritic cell progenitor | 8.18e-25 | 61 |
granulocyte | 1.10e-24 | 8 |
myeloid cell | 1.24e-24 | 108 |
common myeloid progenitor | 1.24e-24 | 108 |
non-classical monocyte | 2.44e-24 | 3 |
CD14-low, CD16-positive monocyte | 2.44e-24 | 3 |
myeloid lineage restricted progenitor cell | 9.26e-23 | 66 |
granulocyte monocyte progenitor cell | 2.19e-22 | 67 |
leukocyte | 7.13e-19 | 136 |
blood cell | 6.30e-18 | 11 |
hematopoietic oligopotent progenitor cell | 2.09e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-15 | 161 |
hematopoietic stem cell | 1.28e-14 | 168 |
hematopoietic cell | 1.07e-13 | 177 |
nongranular leukocyte | 5.43e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 2.21e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.08e-30 | 98 |
blood island | 2.08e-30 | 98 |
hemolymphoid system | 2.74e-27 | 108 |
bone marrow | 1.88e-19 | 76 |
blood | 3.10e-18 | 15 |
haemolymphatic fluid | 3.10e-18 | 15 |
organism substance | 3.10e-18 | 15 |
bone element | 7.56e-18 | 82 |
skeletal element | 4.87e-16 | 90 |
immune system | 1.94e-15 | 93 |
skeletal system | 3.52e-14 | 100 |
lateral plate mesoderm | 7.40e-13 | 203 |
musculoskeletal system | 1.95e-07 | 167 |
mesoderm | 6.01e-07 | 315 |
mesoderm-derived structure | 6.01e-07 | 315 |
presumptive mesoderm | 6.01e-07 | 315 |