FFCP PHASE1:Hg19::chr18:47088247..47088268,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:47088247..47088268,- | |||
|description=CAGE_peak_at_chr18:47088247..47088268,- | |description=CAGE_peak_at_chr18:47088247..47088268,- | ||
|id=chr18:47088247..47088268,- | |id=chr18:47088247..47088268,- | ||
|ontology_enrichment_celltype=CL:0002321!3.62e-18!248;CL:0000220!1.99e-17!246;CL:0000066!3.18e-17!254;CL:0000071!1.58e-14!18;CL:0002546!1.58e-14!18;CL:0002139!4.54e-14!24;CL:0000115!2.44e-13!35;CL:1000449!8.47e-12!16;CL:0002078!1.96e-11!44;CL:1000497!3.19e-11!18;CL:0002518!3.19e-11!18;CL:0000222!1.59e-10!119;CL:0002681!1.09e-09!13;CL:0002584!1.09e-09!13;CL:1000413!1.89e-08!9;CL:1000507!2.08e-08!12;CL:1000494!2.08e-08!12;CL:0002494!9.69e-08!16;CL:0000213!1.33e-07!57;CL:0000215!1.33e-07!57;CL:1000612!1.34e-07!7;CL:1000746!1.34e-07!7 | |ontology_enrichment_celltype=CL:0002321!3.62e-18!248;CL:0000220!1.99e-17!246;CL:0000066!3.18e-17!254;CL:0000071!1.58e-14!18;CL:0002546!1.58e-14!18;CL:0002139!4.54e-14!24;CL:0000115!2.44e-13!35;CL:1000449!8.47e-12!16;CL:0002078!1.96e-11!44;CL:1000497!3.19e-11!18;CL:0002518!3.19e-11!18;CL:0000222!1.59e-10!119;CL:0002681!1.09e-09!13;CL:0002584!1.09e-09!13;CL:1000413!1.89e-08!9;CL:1000507!2.08e-08!12;CL:1000494!2.08e-08!12;CL:0002494!9.69e-08!16;CL:0000213!1.33e-07!57;CL:0000215!1.33e-07!57;CL:1000612!1.34e-07!7;CL:1000746!1.34e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.03e-17;15!CL:1000497;1.26e-14;17!CL:0002518;1.26e-14;17!CL:1000746;2.64e-14;7!CL:1000612;2.64e-14;7!CL:0002681;7.19e-14;12!CL:0002584;7.19e-14;12!CL:0000071;3.59e-13;18!CL:0000115;2.32e-12;36!CL:0002544;7.23e-11;6!CL:0000244;2.68e-10;4!CL:0000731;2.68e-10;4!CL:0002188;4.84e-10;5!CL:1000413;6.19e-10;9!CL:0002139;2.40e-09;24!CL:1000507;4.32e-09;10!CL:1000494;4.32e-09;10!CL:0002605;5.96e-09;3!CL:0002328;9.55e-09;3!CL:0002078;1.82e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,5.08e-17,15;CL:1000497,9.47e-15,17;CL:0002518,9.47e-15,17;CL:1000746,2.46e-14,7;CL:1000612,2.46e-14,7;CL:0000115,4.96e-14,36;CL:0002681,5.70e-14,12;CL:0002584,5.70e-14,12;CL:0000071,2.55e-13,18;CL:0002546,2.55e-13,18;CL:0002078,5.21e-12,45;CL:0000066,1.77e-11,253;CL:0002321,6.55e-11,250;CL:0002544,7.62e-11,6;CL:0000244,1.39e-10,4;CL:0000731,1.39e-10,4;CL:0002188,4.83e-10,5;CL:1000413,5.19e-10,9;CL:0002139,1.87e-09,24;CL:0002605,3.21e-09,3;CL:1000507,3.27e-09,10;CL:1000494,3.27e-09,10;CL:0002328,1.79e-08,3;CL:0000213,1.95e-08,58;CL:0000215,1.95e-08,58;CL:0000222,1.18e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;3.59e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!4.63e-26!118;UBERON:0000483!4.08e-22!309;UBERON:0000119!1.91e-21!312;UBERON:0004111!1.53e-18!241;UBERON:0000025!2.11e-18!194;UBERON:0006554!3.28e-17!44;UBERON:0001008!1.61e-16!45;UBERON:0004872!5.29e-16!84;UBERON:0003103!2.30e-15!69;UBERON:0001986!1.58e-14!18;UBERON:0004638!1.58e-14!18;UBERON:0004852!1.58e-14!18;UBERON:0002113!1.79e-14!27;UBERON:0003918!1.79e-14!27;UBERON:0005095!1.79e-14!27;UBERON:0007687!1.79e-14!27;UBERON:0000487!2.00e-13!22;UBERON:0000490!2.09e-13!138;UBERON:0000080!2.61e-13!18;UBERON:0002120!2.61e-13!18;UBERON:0004875!2.61e-13!18;UBERON:0005721!2.61e-13!18;UBERON:0005754!2.61e-13!18;UBERON:0007297!2.61e-13!18;UBERON:0004876!4.90e-13!20;UBERON:0000477!4.90e-13!286;UBERON:0000489!5.50e-13!32;UBERON:0001981!1.03e-12!60;UBERON:0007500!1.03e-12!60;UBERON:0004537!1.03e-12!60;UBERON:0006965!1.03e-12!60;UBERON:0000058!1.56e-12!26;UBERON:0006555!2.37e-12!17;UBERON:0005103!2.37e-12!17;UBERON:0000083!2.37e-12!17;UBERON:0009201!2.37e-12!17;UBERON:0004819!2.37e-12!17;UBERON:0006553!2.37e-12!17;UBERON:0003074!2.37e-12!17;UBERON:0003060!2.37e-12!17;UBERON:0000055!3.39e-12!69;UBERON:0004211!8.47e-12!16;UBERON:0001285!8.47e-12!16;UBERON:0007684!8.47e-12!16;UBERON:0003220!8.47e-12!16;UBERON:0004208!8.47e-12!16;UBERON:0003887!2.38e-11!21;UBERON:0006914!6.97e-11!25;UBERON:0000922!1.28e-10!612;UBERON:0002049!1.36e-10!79;UBERON:0007798!1.36e-10!79;UBERON:0004535!3.31e-10!110;UBERON:0003064!3.58e-10!37;UBERON:0000468!4.70e-10!659;UBERON:0001009!6.05e-10!113;UBERON:0001637!6.16e-10!42;UBERON:0003509!6.16e-10!42;UBERON:0004572!6.16e-10!42;UBERON:0001225!1.09e-09!13;UBERON:0008987!1.09e-09!13;UBERON:0005172!1.36e-09!55;UBERON:0005173!1.36e-09!55;UBERON:0000467!1.66e-09!625;UBERON:0000480!2.14e-09!626;UBERON:0002100!9.38e-09!216;UBERON:0005256!1.19e-08!143;UBERON:0000923!1.37e-08!604;UBERON:0005291!1.37e-08!604;UBERON:0006598!1.37e-08!604;UBERON:0002532!1.37e-08!604;UBERON:0002050!1.75e-08!605;UBERON:0005423!1.75e-08!605;UBERON:0003915!1.89e-08!9;UBERON:0004700!1.89e-08!9;UBERON:0001917!1.89e-08!9;UBERON:0009773!2.08e-08!12;UBERON:0001231!2.08e-08!12;UBERON:0004810!2.08e-08!12;UBERON:0000353!7.13e-08!17;UBERON:0000074!1.34e-07!7;UBERON:0001229!1.34e-07!7;UBERON:0001230!1.34e-07!7;UBERON:0005749!1.34e-07!7;UBERON:0004199!1.34e-07!7;UBERON:0004209!1.34e-07!7;UBERON:0004198!1.34e-07!7;UBERON:0002417!1.36e-07!61;UBERON:0000916!1.36e-07!61;UBERON:0004573!1.64e-07!33;UBERON:0004571!1.64e-07!33;UBERON:0000481!4.25e-07!347;UBERON:0009569!4.65e-07!113;UBERON:0001851!4.70e-07!16 | |||
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| ||
|short_description=p@chr18:47088247..47088268,- | |short_description=p@chr18:47088247..47088268,- | ||
}} | }} |
Latest revision as of 01:12, 26 July 2015
Short description: | p@chr18:47088247..47088268, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:47088247..47088268, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 5.08e-17 | 15 |
kidney cell | 9.47e-15 | 17 |
kidney epithelial cell | 9.47e-15 | 17 |
glomerular cell | 2.46e-14 | 7 |
kidney corpuscule cell | 2.46e-14 | 7 |
endothelial cell | 4.96e-14 | 36 |
kidney cortical cell | 5.70e-14 | 12 |
renal cortical epithelial cell | 5.70e-14 | 12 |
blood vessel endothelial cell | 2.55e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.55e-13 | 18 |
meso-epithelial cell | 5.21e-12 | 45 |
epithelial cell | 1.77e-11 | 253 |
embryonic cell | 6.55e-11 | 250 |
aortic endothelial cell | 7.62e-11 | 6 |
transitional epithelial cell | 1.39e-10 | 4 |
urothelial cell | 1.39e-10 | 4 |
glomerular endothelial cell | 4.83e-10 | 5 |
endothelial cell of artery | 5.19e-10 | 9 |
endothelial cell of vascular tree | 1.87e-09 | 24 |
astrocyte of the cerebral cortex | 3.21e-09 | 3 |
kidney tubule cell | 3.27e-09 | 10 |
nephron tubule epithelial cell | 3.27e-09 | 10 |
bronchial epithelial cell | 1.79e-08 | 3 |
lining cell | 1.95e-08 | 58 |
barrier cell | 1.95e-08 | 58 |
mesodermal cell | 1.18e-07 | 121 |