FFCP PHASE1:Hg19::chr1:153919349..153919375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9909 | |EntrezGene=9909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29044 | |HGNC=29044 | ||
|TSSclassifier=strong | |||
|UniProt=O75064 | |UniProt=O75064 | ||
|association_with_transcript=-177bp_to_ENST00000361217_5end | |association_with_transcript=-177bp_to_ENST00000361217_5end | ||
|cluster_id=chr1:153919349..153919375,- | |||
|coexpression_cluster_id=C3365 | |||
|description=CAGE_peak_7_at_DENND4B_5end | |description=CAGE_peak_7_at_DENND4B_5end | ||
|id=chr1:153919349..153919375,- | |id=chr1:153919349..153919375,- | ||
|ontology_enrichment_celltype=CL:0000738!4.84e-62!140;CL:0000037!2.82e-52!172;CL:0000566!2.82e-52!172;CL:0002087!3.25e-49!119;CL:0000988!1.14e-48!182;CL:0002032!7.11e-47!165;CL:0000837!7.11e-47!165;CL:0002031!5.40e-46!124;CL:0000766!3.09e-38!76;CL:0002057!1.39e-37!42;CL:0000557!1.42e-36!71;CL:0002009!2.07e-36!65;CL:0000860!4.14e-34!45;CL:0002194!6.17e-34!63;CL:0000576!6.17e-34!63;CL:0000040!6.17e-34!63;CL:0000559!6.17e-34!63;CL:0000763!6.62e-32!112;CL:0000049!6.62e-32!112;CL:0000839!1.26e-31!70;CL:0000945!8.93e-18!24;CL:0000826!8.93e-18!24;CL:0000451!1.02e-15!10;CL:0000990!5.02e-13!8;CL:0000542!5.05e-13!53;CL:0000051!5.05e-13!53;CL:0000838!3.33e-12!52;CL:0000134!8.29e-11!358;CL:0002320!4.30e-10!365;CL:0000840!1.15e-09!5;CL:0001029!1.15e-09!5;CL:0000219!8.09e-09!390;CL:0000236!2.48e-08!14;CL:0002393!5.86e-08!9;CL:0002397!5.86e-08!9;CL:0000453!9.55e-08!5 | |ontology_enrichment_celltype=CL:0000738!4.84e-62!140;CL:0000037!2.82e-52!172;CL:0000566!2.82e-52!172;CL:0002087!3.25e-49!119;CL:0000988!1.14e-48!182;CL:0002032!7.11e-47!165;CL:0000837!7.11e-47!165;CL:0002031!5.40e-46!124;CL:0000766!3.09e-38!76;CL:0002057!1.39e-37!42;CL:0000557!1.42e-36!71;CL:0002009!2.07e-36!65;CL:0000860!4.14e-34!45;CL:0002194!6.17e-34!63;CL:0000576!6.17e-34!63;CL:0000040!6.17e-34!63;CL:0000559!6.17e-34!63;CL:0000763!6.62e-32!112;CL:0000049!6.62e-32!112;CL:0000839!1.26e-31!70;CL:0000945!8.93e-18!24;CL:0000826!8.93e-18!24;CL:0000451!1.02e-15!10;CL:0000990!5.02e-13!8;CL:0000542!5.05e-13!53;CL:0000051!5.05e-13!53;CL:0000838!3.33e-12!52;CL:0000134!8.29e-11!358;CL:0002320!4.30e-10!365;CL:0000840!1.15e-09!5;CL:0001029!1.15e-09!5;CL:0000219!8.09e-09!390;CL:0000236!2.48e-08!14;CL:0002393!5.86e-08!9;CL:0002397!5.86e-08!9;CL:0000453!9.55e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000451;3.25e-41;10!CL:0000990;2.72e-32;8!CL:0000840;1.48e-28;5!CL:0000945;2.63e-20;24!CL:0000236;6.92e-16;13!CL:0000784;2.38e-15;3!CL:0000453;4.34e-15;5!CL:0001014;6.82e-11;2!CL:0001016;6.82e-11;2!CL:0000771;8.45e-11;2!CL:0000738;9.08e-11;136!CL:0000094;1.37e-09;8!CL:0000860;2.73e-09;33!CL:0002057;2.73e-09;33!CL:0002087;7.96e-08;104!CL:0002393;4.51e-07;6!CL:0002397;4.51e-07;6!CL:0000081;5.58e-07;11!CL:0000775;5.80e-07;3!CL:0000542;6.99e-07;53!CL:0000766;9.53e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,3.59e-41,10;CL:0000738,2.80e-40,136;CL:0000037,4.33e-33,168;CL:0000990,2.99e-32,8;CL:0000988,5.23e-31,177;CL:0002032,1.33e-30,161;CL:0000837,1.33e-30,161;CL:0000840,1.57e-28,5;CL:0001029,1.57e-28,5;CL:0002031,7.31e-25,120;CL:0002087,5.99e-24,115;CL:0000945,2.33e-20,24;CL:0000826,2.33e-20,24;CL:0000766,2.59e-20,72;CL:0000763,2.62e-20,108;CL:0000049,2.62e-20,108;CL:0000557,1.04e-19,67;CL:0002009,1.15e-19,61;CL:0002194,1.16e-15,59;CL:0000576,1.16e-15,59;CL:0000040,1.16e-15,59;CL:0000559,1.16e-15,59;CL:0000784,2.34e-15,3;CL:0000453,4.53e-15,5;CL:0000236,1.02e-14,14;CL:0000839,1.20e-13,66;CL:0000860,8.30e-13,42;CL:0002057,8.30e-13,42;CL:0000134,1.84e-11,354;CL:0002320,4.42e-11,361;CL:0000473,6.70e-11,48;CL:0000234,6.70e-11,48;CL:0001014,6.85e-11,2;CL:0001016,6.85e-11,2;CL:0000771,8.68e-11,2;CL:0000219,1.50e-10,386;CL:0000094,1.04e-09,8;CL:0000542,1.24e-09,53;CL:0000051,1.24e-09,53;CL:0000838,3.13e-08,52;CL:0000048,4.27e-08,427;CL:0000723,7.19e-08,433;CL:0000034,1.41e-07,441;CL:0000775,3.93e-07,3;CL:0000081,4.59e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.60e-10;42!CL:0000051;6.99e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.22e-43!102;UBERON:0003061!1.22e-43!102;UBERON:0002193!1.23e-40!112;UBERON:0002371!3.68e-33!80;UBERON:0001474!1.06e-30!86;UBERON:0002405!5.75e-26!115;UBERON:0004765!2.13e-23!101;UBERON:0001434!2.13e-23!101;UBERON:0003081!1.90e-11!216;UBERON:0002384!3.91e-09!375;UBERON:0002204!9.68e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.94e-17,76;UBERON:0002405,3.04e-16,93;UBERON:0001474,2.41e-15,82;UBERON:0002390,3.45e-15,98;UBERON:0003061,3.45e-15,98;UBERON:0002193,8.28e-15,108;UBERON:0004765,1.31e-13,90;UBERON:0001434,7.86e-12,100;UBERON:0002384,1.46e-10,371 | |||
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|short_description=p7@DENND4B | |short_description=p7@DENND4B | ||
}} | }} |
Latest revision as of 07:45, 17 September 2015
Short description: | p7@DENND4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DENND4B_5end |
Coexpression cluster: | C3365_Dendritic_immature_chronic_CD19_migratory_CD14_blood |
Association with transcript: | -177bp_to_ENST00000361217_5end |
EntrezGene: | DENND4B |
HGNC: | 29044 |
UniProt: | O75064 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.94e-17 | 76 |
immune system | 3.04e-16 | 93 |
bone element | 2.41e-15 | 82 |
hematopoietic system | 3.45e-15 | 98 |
blood island | 3.45e-15 | 98 |
hemolymphoid system | 8.28e-15 | 108 |
skeletal element | 1.31e-13 | 90 |
skeletal system | 7.86e-12 | 100 |
connective tissue | 1.46e-10 | 371 |