FFCP PHASE1:Hg19::chr1:179057056..179057064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:179057056..179057064,+ | |||
|description=CAGE_peak_at_chr1:179057056..179057064,+ | |description=CAGE_peak_at_chr1:179057056..179057064,+ | ||
|id=chr1:179057056..179057064,+ | |id=chr1:179057056..179057064,+ | ||
|ontology_enrichment_celltype=CL:0000115!2.44e-22!35;CL:0002078!2.48e-20!44;CL:0002139!2.35e-16!24;CL:0000222!5.66e-13!119;CL:0000213!2.38e-12!57;CL:0000215!2.38e-12!57;CL:0005020!5.69e-10!6;CL:0002138!5.69e-10!6;CL:0005022!5.69e-10!6;CL:0000071!3.26e-09!18;CL:0002546!3.26e-09!18;CL:0002322!3.39e-08!5;CL:0000039!1.39e-07!7;CL:0000586!1.39e-07!7;CL:0000990!4.86e-07!8 | |ontology_enrichment_celltype=CL:0000115!2.44e-22!35;CL:0002078!2.48e-20!44;CL:0002139!2.35e-16!24;CL:0000222!5.66e-13!119;CL:0000213!2.38e-12!57;CL:0000215!2.38e-12!57;CL:0005020!5.69e-10!6;CL:0002138!5.69e-10!6;CL:0005022!5.69e-10!6;CL:0000071!3.26e-09!18;CL:0002546!3.26e-09!18;CL:0002322!3.39e-08!5;CL:0000039!1.39e-07!7;CL:0000586!1.39e-07!7;CL:0000990!4.86e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002138;5.20e-29;6!CL:0000115;1.27e-27;36!CL:0002322;3.05e-23;5!CL:0002139;5.45e-22;24!CL:0002078;1.89e-19;45!CL:0000039;2.79e-17;7!CL:0000586;2.79e-17;7!CL:0002188;2.68e-15;5!CL:0000840;1.64e-12;5!CL:0000213;2.05e-11;58!CL:0000215;2.05e-11;58!CL:1000746;5.82e-11;7!CL:1000612;5.82e-11;7!CL:0000990;2.25e-08;8!CL:0000235;4.52e-08;6!CL:0002321;1.38e-07;15!CL:0002144;1.71e-07;3!CL:0000540;3.07e-07;6!CL:0000404;3.07e-07;6!CL:0000451;7.29e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.72e-34,36;CL:0005020,4.30e-29,6;CL:0002138,4.30e-29,6;CL:0005022,4.30e-29,6;CL:0002078,8.48e-27,45;CL:0002322,2.85e-23,5;CL:0002139,5.76e-22,24;CL:0000213,6.61e-20,58;CL:0000215,6.61e-20,58;CL:0000039,2.06e-17,7;CL:0000586,2.06e-17,7;CL:0002188,3.36e-15,5;CL:0000840,1.67e-12,5;CL:0001029,1.67e-12,5;CL:1000746,6.82e-11,7;CL:1000612,6.82e-11,7;CL:0000222,1.17e-08,121;CL:0000990,2.27e-08,8;CL:0000235,4.80e-08,6;CL:0002144,1.86e-07,3;CL:0000540,3.84e-07,6;CL:0000031,3.84e-07,6;CL:0000404,3.84e-07,6;CL:0000451,7.36e-07,10;CL:0002321,9.04e-07,250 | |||
|ontology_enrichment_development_v019=CL:0005022;5.20e-29;6!UBERON:0009117;4.94e-08;10!UBERON:0005564;4.94e-08;10!CL:0000031;3.07e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.26e-09!18;UBERON:0004638!3.26e-09!18;UBERON:0004852!3.26e-09!18;UBERON:0002465!4.44e-09!10;UBERON:0002405!9.04e-08!115;UBERON:0001473!3.88e-07!8;UBERON:0004536!3.88e-07!8;UBERON:0006558!3.88e-07!8;UBERON:0000487!6.17e-07!22;UBERON:0002193!6.84e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.29e-21;8!UBERON:0004536;1.29e-21;8!UBERON:0006558;1.29e-21;8!UBERON:0002465;3.59e-17;10!UBERON:0000074;5.82e-11;7!UBERON:0001229;5.82e-11;7!UBERON:0000473;4.95e-10;8!UBERON:0002405;7.17e-08;27!UBERON:0000353;8.81e-08;15!UBERON:0010523;1.71e-07;3!UBERON:0001915;1.71e-07;3!UBERON:0001982;1.71e-07;3!UBERON:0003135;2.64e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.12e-21,8;UBERON:0004536,1.12e-21,8;UBERON:0006558,1.12e-21,8;UBERON:0002465,3.21e-17,10;UBERON:0010532,6.82e-11,7;UBERON:0000074,6.82e-11,7;UBERON:0001229,6.82e-11,7;UBERON:0001230,6.82e-11,7;UBERON:0003220,6.82e-11,7;UBERON:0005749,6.82e-11,7;UBERON:0004199,6.82e-11,7;UBERON:0004209,6.82e-11,7;UBERON:0004198,6.82e-11,7;UBERON:0000473,4.30e-10,8;UBERON:0005103,1.53e-09,8;UBERON:0000083,1.53e-09,8;UBERON:0009201,1.53e-09,8;UBERON:0006553,1.53e-09,8;UBERON:0003074,1.53e-09,8;UBERON:0003060,1.53e-09,8;UBERON:0003887,1.78e-09,12;UBERON:0000080,1.72e-08,9;UBERON:0002120,1.72e-08,9;UBERON:0004875,1.72e-08,9;UBERON:0005721,1.72e-08,9;UBERON:0005754,1.72e-08,9;UBERON:0007297,1.72e-08,9;UBERON:0002405,3.60e-08,93;UBERON:0000353,9.63e-08,15;UBERON:0000055,1.02e-07,68;UBERON:0010523,1.86e-07,3;UBERON:0001915,1.86e-07,3;UBERON:0001982,1.86e-07,3;UBERON:0003135,2.40e-07,11;UBERON:0004876,5.88e-07,11 | |||
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|short_description=p@chr1:179057056..179057064,+ | |short_description=p@chr1:179057056..179057064,+ | ||
}} | }} |
Latest revision as of 00:50, 28 July 2015
Short description: | p@chr1:179057056..179057064, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:179057056..179057064, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.72e-34 | 36 |
lymphangioblast | 4.30e-29 | 6 |
endothelial cell of lymphatic vessel | 4.30e-29 | 6 |
vascular lymphangioblast | 4.30e-29 | 6 |
meso-epithelial cell | 8.48e-27 | 45 |
embryonic stem cell | 2.85e-23 | 5 |
endothelial cell of vascular tree | 5.76e-22 | 24 |
lining cell | 6.61e-20 | 58 |
barrier cell | 6.61e-20 | 58 |
germ line cell | 2.06e-17 | 7 |
germ cell | 2.06e-17 | 7 |
glomerular endothelial cell | 3.36e-15 | 5 |
immature conventional dendritic cell | 1.67e-12 | 5 |
common dendritic progenitor | 1.67e-12 | 5 |
glomerular cell | 6.82e-11 | 7 |
kidney corpuscule cell | 6.82e-11 | 7 |
mesodermal cell | 1.17e-08 | 121 |
conventional dendritic cell | 2.27e-08 | 8 |
macrophage | 4.80e-08 | 6 |
capillary endothelial cell | 1.86e-07 | 3 |
neuron | 3.84e-07 | 6 |
neuroblast | 3.84e-07 | 6 |
electrically signaling cell | 3.84e-07 | 6 |
dendritic cell | 7.36e-07 | 10 |
embryonic cell | 9.04e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.12e-21 | 8 |
lymph vasculature | 1.12e-21 | 8 |
lymphatic part of lymphoid system | 1.12e-21 | 8 |
lymphoid system | 3.21e-17 | 10 |
primitive nephron | 6.82e-11 | 7 |
renal glomerulus | 6.82e-11 | 7 |
renal corpuscle | 6.82e-11 | 7 |
glomerular capsule | 6.82e-11 | 7 |
metanephric mesenchyme | 6.82e-11 | 7 |
glomerular tuft | 6.82e-11 | 7 |
S-shaped body | 6.82e-11 | 7 |
renal vesicle | 6.82e-11 | 7 |
comma-shaped body | 6.82e-11 | 7 |
testis | 4.30e-10 | 8 |
mesonephric epithelium | 1.53e-09 | 8 |
mesonephric tubule | 1.53e-09 | 8 |
nephric duct | 1.53e-09 | 8 |
renal duct | 1.53e-09 | 8 |
mesonephric duct | 1.53e-09 | 8 |
pronephric duct | 1.53e-09 | 8 |
intraembryonic coelom | 1.78e-09 | 12 |
mesonephros | 1.72e-08 | 9 |
pronephros | 1.72e-08 | 9 |
nephrogenic cord | 1.72e-08 | 9 |
pronephric mesoderm | 1.72e-08 | 9 |
rostral part of nephrogenic cord | 1.72e-08 | 9 |
presumptive pronephric mesoderm | 1.72e-08 | 9 |
immune system | 3.60e-08 | 93 |
parenchyma | 9.63e-08 | 15 |
vessel | 1.02e-07 | 68 |
microcirculatory vessel | 1.86e-07 | 3 |
endothelium of capillary | 1.86e-07 | 3 |
capillary | 1.86e-07 | 3 |
male reproductive organ | 2.40e-07 | 11 |
urogenital ridge | 5.88e-07 | 11 |