FFCP PHASE1:Hg19::chr1:236150288..236150323,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:236150288..236150323,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr1:236150288..236150323,- | |description=CAGE_peak_at_chr1:236150288..236150323,- | ||
|id=chr1:236150288..236150323,- | |id=chr1:236150288..236150323,- | ||
|ontology_enrichment_celltype=CL:0002057!6.12e-47!42;CL:0000860!2.74e-43!45;CL:0002194!1.97e-30!63;CL:0000576!1.97e-30!63;CL:0000040!1.97e-30!63;CL:0000559!1.97e-30!63;CL:0002009!2.86e-29!65;CL:0000839!1.18e-26!70;CL:0000557!3.55e-26!71;CL:0000766!5.72e-24!76;CL:0000763!3.23e-15!112;CL:0000049!3.23e-15!112;CL:0002087!6.39e-15!119;CL:0002031!5.18e-14!124;CL:0002139!1.25e-12!24;CL:0000738!1.49e-11!140;CL:0002032!1.50e-09!165;CL:0000837!1.50e-09!165;CL:0000115!1.60e-09!35;CL:0002618!2.10e-09!3;CL:0000037!7.31e-09!172;CL:0000566!7.31e-09!172;CL:0000988!1.07e-08!182;CL:0002078!2.43e-08!44;CL:0005020!4.72e-08!6;CL:0002138!4.72e-08!6;CL:0005022!4.72e-08!6;CL:0000048!2.11e-07!430;CL:0000071!3.61e-07!18;CL:0002546!3.61e-07!18;CL:0000723!3.92e-07!436;CL:0002371!5.58e-07!591;CL:0000034!8.67e-07!444 | |ontology_enrichment_celltype=CL:0002057!6.12e-47!42;CL:0000860!2.74e-43!45;CL:0002194!1.97e-30!63;CL:0000576!1.97e-30!63;CL:0000040!1.97e-30!63;CL:0000559!1.97e-30!63;CL:0002009!2.86e-29!65;CL:0000839!1.18e-26!70;CL:0000557!3.55e-26!71;CL:0000766!5.72e-24!76;CL:0000763!3.23e-15!112;CL:0000049!3.23e-15!112;CL:0002087!6.39e-15!119;CL:0002031!5.18e-14!124;CL:0002139!1.25e-12!24;CL:0000738!1.49e-11!140;CL:0002032!1.50e-09!165;CL:0000837!1.50e-09!165;CL:0000115!1.60e-09!35;CL:0002618!2.10e-09!3;CL:0000037!7.31e-09!172;CL:0000566!7.31e-09!172;CL:0000988!1.07e-08!182;CL:0002078!2.43e-08!44;CL:0005020!4.72e-08!6;CL:0002138!4.72e-08!6;CL:0005022!4.72e-08!6;CL:0000048!2.11e-07!430;CL:0000071!3.61e-07!18;CL:0002546!3.61e-07!18;CL:0000723!3.92e-07!436;CL:0002371!5.58e-07!591;CL:0000034!8.67e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.19e-57;33!CL:0002057;9.19e-57;33!CL:0000473;3.53e-40;39!CL:0000234;3.53e-40;39!CL:0000576;2.38e-23;48!CL:0000766;7.49e-19;69!CL:0002591;1.83e-13;1!CL:0002087;7.97e-11;104!CL:0000763;1.31e-09;100!CL:0002593;2.25e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-48,42;CL:0002057,1.38e-48,42;CL:0000473,2.41e-42,48;CL:0000234,2.41e-42,48;CL:0002194,1.35e-33,59;CL:0000576,1.35e-33,59;CL:0000040,1.35e-33,59;CL:0000559,1.35e-33,59;CL:0002009,1.82e-32,61;CL:0000839,6.18e-30,66;CL:0000557,1.79e-29,67;CL:0000766,2.35e-27,72;CL:0000763,8.12e-18,108;CL:0000049,8.12e-18,108;CL:0002087,1.20e-16,115;CL:0002031,6.82e-16,120;CL:0000738,7.56e-14,136;CL:0002591,2.07e-13,1;CL:0002032,1.87e-11,161;CL:0000837,1.87e-11,161;CL:0000037,6.54e-11,168;CL:0000988,2.84e-10,177;CL:0002593,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.54e-33;42!CL:0000049;6.54e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.37e-24!80;UBERON:0001474!4.05e-22!86;UBERON:0002193!7.95e-21!112;UBERON:0004765!1.38e-20!101;UBERON:0001434!1.38e-20!101;UBERON:0002405!4.67e-20!115;UBERON:0002390!1.86e-17!102;UBERON:0003061!1.86e-17!102;UBERON:0003081!5.70e-16!216;UBERON:0002204!4.79e-14!167;UBERON:0001986!3.61e-07!18;UBERON:0004638!3.61e-07!18;UBERON:0004852!3.61e-07!18;UBERON:0000055!4.55e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.25e-07;2!UBERON:0002012;2.25e-07;2!UBERON:0002456;2.25e-07;2!UBERON:0008886;2.25e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.40e-26,76;UBERON:0001474,7.02e-24,82;UBERON:0004765,1.20e-21,90;UBERON:0002405,6.58e-21,93;UBERON:0002390,8.96e-20,98;UBERON:0003061,8.96e-20,98;UBERON:0001434,2.37e-19,100;UBERON:0002193,8.12e-18,108;UBERON:0002204,5.81e-15,167;UBERON:0003081,7.27e-14,203;UBERON:0000926,2.79e-08,315;UBERON:0004120,2.79e-08,315;UBERON:0006603,2.79e-08,315;UBERON:0002456,2.25e-07,2;UBERON:0000078,2.40e-07,2;UBERON:0007497,2.40e-07,2;UBERON:0003643,2.40e-07,2;UBERON:0003504,2.40e-07,2;UBERON:0003469,2.40e-07,2;UBERON:0003496,2.40e-07,2;UBERON:0002012,2.40e-07,2;UBERON:0008886,2.40e-07,2;UBERON:0007303,2.40e-07,2;UBERON:0002061,2.40e-07,2;UBERON:0005432,2.40e-07,2;UBERON:0004363,2.40e-07,2 | |||
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| ||
|short_description=p@chr1:236150288..236150323,- | |short_description=p@chr1:236150288..236150323,- | ||
}} | }} |
Latest revision as of 05:25, 28 July 2015
Short description: | p@chr1:236150288..236150323, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236150288..236150323, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-48 | 42 |
defensive cell | 2.41e-42 | 48 |
phagocyte | 2.41e-42 | 48 |
monopoietic cell | 1.35e-33 | 59 |
monocyte | 1.35e-33 | 59 |
monoblast | 1.35e-33 | 59 |
promonocyte | 1.35e-33 | 59 |
macrophage dendritic cell progenitor | 1.82e-32 | 61 |
myeloid lineage restricted progenitor cell | 6.18e-30 | 66 |
granulocyte monocyte progenitor cell | 1.79e-29 | 67 |
myeloid leukocyte | 2.35e-27 | 72 |
myeloid cell | 8.12e-18 | 108 |
common myeloid progenitor | 8.12e-18 | 108 |
nongranular leukocyte | 1.20e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 6.82e-16 | 120 |
leukocyte | 7.56e-14 | 136 |
smooth muscle cell of the pulmonary artery | 2.07e-13 | 1 |
hematopoietic oligopotent progenitor cell | 1.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-11 | 161 |
hematopoietic stem cell | 6.54e-11 | 168 |
hematopoietic cell | 2.84e-10 | 177 |
smooth muscle cell of the internal thoracic artery | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.40e-26 | 76 |
bone element | 7.02e-24 | 82 |
skeletal element | 1.20e-21 | 90 |
immune system | 6.58e-21 | 93 |
hematopoietic system | 8.96e-20 | 98 |
blood island | 8.96e-20 | 98 |
skeletal system | 2.37e-19 | 100 |
hemolymphoid system | 8.12e-18 | 108 |
musculoskeletal system | 5.81e-15 | 167 |
lateral plate mesoderm | 7.27e-14 | 203 |
mesoderm | 2.79e-08 | 315 |
mesoderm-derived structure | 2.79e-08 | 315 |
presumptive mesoderm | 2.79e-08 | 315 |
internal thoracic artery | 2.25e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.40e-07 | 2 |
developing epithelial placode | 2.40e-07 | 2 |
respiratory system arterial blood vessel | 2.40e-07 | 2 |
respiratory system blood vessel | 2.40e-07 | 2 |
respiratory system artery | 2.40e-07 | 2 |
head blood vessel | 2.40e-07 | 2 |
pulmonary artery | 2.40e-07 | 2 |
pulmonary vascular system | 2.40e-07 | 2 |
pharyngeal vasculature | 2.40e-07 | 2 |
truncus arteriosus | 2.40e-07 | 2 |
aortic sac | 2.40e-07 | 2 |
pharyngeal arch artery | 2.40e-07 | 2 |