FFCP PHASE1:Hg19::chr20:43727168..43727209,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:43727168..43727209,- | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_at_chr20:43727168..43727209,- | |description=CAGE_peak_at_chr20:43727168..43727209,- | ||
|id=chr20:43727168..43727209,- | |id=chr20:43727168..43727209,- | ||
|ontology_enrichment_celltype=CL:1000507!9.34e-11!12;CL:1000494!9.34e-11!12;CL:1000449!7.45e-09!16;CL:1000497!1.95e-07!18;CL:0002518!1.95e-07!18 | |ontology_enrichment_celltype=CL:1000507!9.34e-11!12;CL:1000494!9.34e-11!12;CL:1000449!7.45e-09!16;CL:1000497!1.95e-07!18;CL:0002518!1.95e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.95e-17;10!CL:1000494;1.95e-17;10!CL:1000449;2.59e-16;15!CL:0002535;1.07e-15;2!CL:0002536;1.03e-14;2!CL:1000497;2.45e-14;17!CL:0002518;2.45e-14;17!CL:0000239;4.10e-10;3!CL:1000615;4.10e-10;3!CL:0002306;4.10e-10;3!CL:0002681;2.40e-09;12!CL:0002584;2.40e-09;12!CL:0002032;3.32e-08;1!CL:0000557;3.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.34e-17,10;CL:1000494,1.34e-17,10;CL:1000449,1.55e-16,15;CL:0002535,1.07e-15,2;CL:0002536,1.47e-14,2;CL:1000497,1.57e-14,17;CL:0002518,1.57e-14,17;CL:0000239,3.42e-10,3;CL:1000615,3.42e-10,3;CL:0002306,3.42e-10,3;CL:0002681,1.61e-09,12;CL:0002584,1.61e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;9.28e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,9.32e-14,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;1.95e-17;10!UBERON:0009773;1.95e-17;10!UBERON:0001231;1.95e-17;10!UBERON:0004810;1.95e-17;10!UBERON:0006555;2.59e-16;15!UBERON:0004819;2.59e-16;15!UBERON:0001285;2.59e-16;15!UBERON:0007684;2.59e-16;15!UBERON:0006955;1.07e-15;2!UBERON:0004801;1.07e-15;2!UBERON:0000002;1.50e-11;6!UBERON:0001560;1.50e-11;6!UBERON:0001950;2.85e-11;20!UBERON:0006554;1.40e-10;30!UBERON:0001008;1.40e-10;30!UBERON:0002619;3.01e-10;22!UBERON:0001870;4.10e-10;3!UBERON:0006853;4.10e-10;3!UBERON:0007685;4.10e-10;3!UBERON:0004134;4.10e-10;3!UBERON:0002113;5.27e-10;24!UBERON:0011143;5.27e-10;24!UBERON:0001225;2.40e-09;12!UBERON:0008987;2.40e-09;12!UBERON:0000956;5.26e-09;25!UBERON:0000203;5.26e-09;25!UBERON:0003528;1.57e-08;34!UBERON:0002020;1.57e-08;34!UBERON:0002791;2.11e-08;32!UBERON:0001869;2.34e-08;32!UBERON:0002581;3.32e-08;1!UBERON:0002902;3.32e-08;1!UBERON:0002022;3.32e-08;1!UBERON:0001874;3.32e-08;1!UBERON:0009899;3.32e-08;1!UBERON:0000489;3.46e-08;29!UBERON:0001893;4.31e-08;34!UBERON:0001851;1.68e-07;15!UBERON:0000353;1.68e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.34e-17,10;UBERON:0004211,1.55e-16,15;UBERON:0009773,1.55e-16,15;UBERON:0001231,1.55e-16,15;UBERON:0001285,1.55e-16,15;UBERON:0007684,1.55e-16,15;UBERON:0004208,1.55e-16,15;UBERON:0006955,1.07e-15,2;UBERON:0004801,1.07e-15,2;UBERON:0006555,1.80e-15,16;UBERON:0004819,1.80e-15,16;UBERON:0000002,1.51e-11,6;UBERON:0001560,1.51e-11,6;UBERON:0001950,3.14e-11,20;UBERON:0002619,3.29e-10,22;UBERON:0006853,3.42e-10,3;UBERON:0007685,3.42e-10,3;UBERON:0004134,3.42e-10,3;UBERON:0001870,4.12e-10,3;UBERON:0001225,1.61e-09,12;UBERON:0008987,1.61e-09,12;UBERON:0002791,2.16e-09,32;UBERON:0001869,2.16e-09,32;UBERON:0002113,2.57e-09,26;UBERON:0003918,2.57e-09,26;UBERON:0011143,2.57e-09,26;UBERON:0005095,2.57e-09,26;UBERON:0007687,2.57e-09,26;UBERON:0000956,5.68e-09,25;UBERON:0000203,5.68e-09,25;UBERON:0003528,8.26e-09,34;UBERON:0002020,8.26e-09,34;UBERON:0001893,8.26e-09,34;UBERON:0002902,1.63e-08,1;UBERON:0009899,1.63e-08,1;UBERON:0001874,1.75e-08,1;UBERON:0002581,3.83e-08,1;UBERON:0002022,6.24e-08,1;UBERON:0000489,1.00e-07,31;UBERON:0001851,1.23e-07,15;UBERON:0000353,1.23e-07,15;UBERON:0003056,1.61e-07,61;UBERON:0002780,3.33e-07,41;UBERON:0001890,3.33e-07,41;UBERON:0003080,3.33e-07,41;UBERON:0006240,3.33e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,1.31883489114227,0,0,0,0,0,0,0.246242116153576,0,0.940364164434263,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.785874452986276,1.09288586487763,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0.872188104285069,0,0.12663051166458,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0,0,0.149448680551801,0.587172493218824,0.647491777472526,0.561803226808994,0,0.737005903870608,0.206651562351531,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0.340296549480063,0,0.640672166455702,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,1.06502877754984,0.10075209822764,0.67824236924195,0,0.272746120590835,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0,0.370353780634118,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.317489471460845,0,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0.40101294060657,0.460404944679482,0,0.182091168006717,0,0.451199612907412,0.770153371044148,5.49044838423799,2.92278449306521,0.633309773357254,0,0.340187410553031,0,1.54227252690289,0.541892875087706,1.50506932156456,1.27438136522519,0.831076008928724,1.34324852833307,0,0,0.256450125116389,0,0.976135183992909,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0,0.511359764496605,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0,0.636406495851874,0,0,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0,0,0,1.13841952129715,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0.994147647766298,0.281338832821026,0,0,0,0,0,4.53478946137697,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0.789168805698781,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,32.3860248479098,0.34945333648406,0,0,0,0,0,0,0,0,0,1.01297273529406,0.586654148204409,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0.798716001995964,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,1.03274246318642,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,1.01980882368113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.122026264901963,0.3755727921195,0.573409195690071,0.221858103073705,0.18628920882415,0.276697269872462,0,0,0.856396000634902,0,0,0.724605143054126,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.465788870628778,0,0,0,0.450772826991655,0,0,0.363697318405119,0.537052785212442,0.928067519756987,0.796191777397232,0,0,0,0,0,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0.743614585554013,0,0.318004350653419,0,0,0,0,0.706521476061055,0,0.478901577171454,0.615349092722265,0.756215088665154,1.59061680667701,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0.781078098613847,0.206686796501184,0.634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.679697329768317,1.24968269769413,0,0,0,1.57115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57333409808316,0,0,0,0,0.452888530700021,0.154348316215889,0.437119121007915,0,0,0,0.588925401344836,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0.1577715621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| ||
|short_description=p@chr20:43727168..43727209,- | |short_description=p@chr20:43727168..43727209,- | ||
}} | }} |
Latest revision as of 14:17, 28 July 2015
Short description: | p@chr20:43727168..43727209, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43727168..43727209, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.34e-17 | 10 |
nephron tubule epithelial cell | 1.34e-17 | 10 |
epithelial cell of nephron | 1.55e-16 | 15 |
epithelial cell of cervix | 1.07e-15 | 2 |
amniotic epithelial cell | 1.47e-14 | 2 |
kidney cell | 1.57e-14 | 17 |
kidney epithelial cell | 1.57e-14 | 17 |
brush border epithelial cell | 3.42e-10 | 3 |
kidney cortex tubule cell | 3.42e-10 | 3 |
epithelial cell of proximal tubule | 3.42e-10 | 3 |
kidney cortical cell | 1.61e-09 | 12 |
renal cortical epithelial cell | 1.61e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 9.32e-14 | 5 |