FFCP PHASE1:Hg19::chr17:18160552..18160565,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:18160552..18160565,- | |||
|description=CAGE_peak_at_chr17:18160552..18160565,- | |description=CAGE_peak_at_chr17:18160552..18160565,- | ||
|id=chr17:18160552..18160565,- | |id=chr17:18160552..18160565,- | ||
|ontology_enrichment_celltype=CL:0000066!2.41e-29!254;CL:0002076!6.97e-13!43;CL:0000223!8.58e-12!59;CL:0002368!2.54e-11!13;CL:1000507!3.73e-10!12;CL:1000494!3.73e-10!12;CL:0002202!7.40e-10!9;CL:0002632!7.40e-10!9;CL:1000449!1.24e-09!16;CL:0000239!2.18e-09!3;CL:1000615!2.18e-09!3;CL:0002306!2.18e-09!3;CL:0002621!7.36e-09!3;CL:0000076!1.67e-08!62;CL:1000497!2.17e-08!18;CL:0002518!2.17e-08!18;CL:0000082!1.90e-07!19;CL:0002681!3.76e-07!13;CL:0002584!3.76e-07!13 | |ontology_enrichment_celltype=CL:0000066!2.41e-29!254;CL:0002076!6.97e-13!43;CL:0000223!8.58e-12!59;CL:0002368!2.54e-11!13;CL:1000507!3.73e-10!12;CL:1000494!3.73e-10!12;CL:0002202!7.40e-10!9;CL:0002632!7.40e-10!9;CL:1000449!1.24e-09!16;CL:0000239!2.18e-09!3;CL:1000615!2.18e-09!3;CL:0002306!2.18e-09!3;CL:0002621!7.36e-09!3;CL:0000076!1.67e-08!62;CL:1000497!2.17e-08!18;CL:0002518!2.17e-08!18;CL:0000082!1.90e-07!19;CL:0002681!3.76e-07!13;CL:0002584!3.76e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000239;8.39e-38;3!CL:1000615;8.39e-38;3!CL:0002306;8.39e-38;3!CL:1000449;9.08e-21;15!CL:1000507;4.08e-20;10!CL:1000494;4.08e-20;10!CL:1000497;2.49e-18;17!CL:0002518;2.49e-18;17!CL:0002681;5.33e-17;12!CL:0002584;5.33e-17;12!CL:0002097;1.12e-07;2!CL:0000575;1.81e-07;2!CL:0002535;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.48e-38,3;CL:1000615,3.48e-38,3;CL:0002306,3.48e-38,3;CL:1000449,6.01e-21,15;CL:1000507,2.42e-20,10;CL:1000494,2.42e-20,10;CL:1000497,1.73e-18,17;CL:0002518,1.73e-18,17;CL:0002681,4.07e-17,12;CL:0002584,4.07e-17,12;CL:0000066,8.01e-11,253;CL:0002097,1.12e-07,2;CL:0002535,1.87e-07,2;CL:0000575,1.99e-07,2;CL:0002078,5.78e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.28e-14;1 | |||
|ontology_enrichment_disease=DOID:305!1.99e-12!106;DOID:1749!1.80e-10!14;DOID:0050687!8.39e-09!143 | |ontology_enrichment_disease=DOID:305!1.99e-12!106;DOID:1749!1.80e-10!14;DOID:0050687!8.39e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:3111;1.18e-13;1!DOID:3603;1.18e-13;1!DOID:4929;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.10e-13,1;DOID:3603,1.10e-13,1;DOID:4929,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005911!2.57e-12!82;UBERON:0006554!3.29e-12!44;UBERON:0001008!7.67e-12!45;UBERON:0004807!1.35e-10!28;UBERON:0000058!2.25e-10!26;UBERON:0009569!3.12e-10!113;UBERON:0009773!3.73e-10!12;UBERON:0001231!3.73e-10!12;UBERON:0004810!3.73e-10!12;UBERON:0005157!4.55e-10!51;UBERON:0005177!4.58e-10!107;UBERON:0005153!6.43e-10!37;UBERON:0004211!1.24e-09!16;UBERON:0001285!1.24e-09!16;UBERON:0007684!1.24e-09!16;UBERON:0003220!1.24e-09!16;UBERON:0004208!1.24e-09!16;UBERON:0000466!1.83e-09!126;UBERON:0004119!1.91e-09!169;UBERON:0000925!1.91e-09!169;UBERON:0006595!1.91e-09!169;UBERON:0006853!2.18e-09!3;UBERON:0007685!2.18e-09!3;UBERON:0004134!2.18e-09!3;UBERON:0006555!5.64e-09!17;UBERON:0005103!5.64e-09!17;UBERON:0000083!5.64e-09!17;UBERON:0009201!5.64e-09!17;UBERON:0004819!5.64e-09!17;UBERON:0006553!5.64e-09!17;UBERON:0003074!5.64e-09!17;UBERON:0003060!5.64e-09!17;UBERON:0001004!6.91e-09!72;UBERON:0003064!7.05e-09!37;UBERON:0001949!7.36e-09!3;UBERON:0000080!2.17e-08!18;UBERON:0002120!2.17e-08!18;UBERON:0004875!2.17e-08!18;UBERON:0005721!2.17e-08!18;UBERON:0005754!2.17e-08!18;UBERON:0007297!2.17e-08!18;UBERON:0000365!3.00e-08!5;UBERON:0000464!4.42e-08!104;UBERON:0007196!5.78e-08!14;UBERON:0001558!5.78e-08!14;UBERON:0002113!1.19e-07!27;UBERON:0003918!1.19e-07!27;UBERON:0005095!1.19e-07!27;UBERON:0007687!1.19e-07!27;UBERON:0001851!1.21e-07!16;UBERON:0000489!1.83e-07!32;UBERON:0004802!1.90e-07!19;UBERON:0000115!1.90e-07!19;UBERON:0004876!2.14e-07!20;UBERON:0001225!3.76e-07!13;UBERON:0008987!3.76e-07!13;UBERON:0003887!5.68e-07!21;UBERON:0005910!7.23e-07!6;UBERON:0005178!8.17e-07!34;UBERON:0002224!8.17e-07!34;UBERON:0005172!8.74e-07!55;UBERON:0005173!8.74e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;8.39e-38;3!UBERON:0007685;8.39e-38;3!UBERON:0004134;8.39e-38;3!UBERON:0001851;6.65e-21;15!UBERON:0006555;9.08e-21;15!UBERON:0004819;9.08e-21;15!UBERON:0001285;9.08e-21;15!UBERON:0007684;9.08e-21;15!UBERON:0004211;4.08e-20;10!UBERON:0009773;4.08e-20;10!UBERON:0001231;4.08e-20;10!UBERON:0004810;4.08e-20;10!UBERON:0001225;5.33e-17;12!UBERON:0008987;5.33e-17;12!UBERON:0000353;1.17e-13;15!UBERON:0004913;1.18e-13;1!UBERON:0003703;1.18e-13;1!UBERON:0001174;1.18e-13;1!UBERON:0004914;1.18e-13;1!UBERON:0002394;1.95e-13;4!UBERON:0003928;1.95e-13;4!UBERON:0002113;5.52e-13;24!UBERON:0011143;5.52e-13;24!UBERON:0000489;9.74e-11;29!UBERON:0006554;2.23e-10;30!UBERON:0001008;2.23e-10;30!UBERON:0002294;4.58e-08;7!UBERON:0001173;4.58e-08;7!UBERON:0006955;1.81e-07;2!UBERON:0004801;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.48e-38,3;UBERON:0007685,3.48e-38,3;UBERON:0004134,3.48e-38,3;UBERON:0001851,5.09e-21,15;UBERON:0004211,6.01e-21,15;UBERON:0009773,6.01e-21,15;UBERON:0001231,6.01e-21,15;UBERON:0001285,6.01e-21,15;UBERON:0007684,6.01e-21,15;UBERON:0004208,6.01e-21,15;UBERON:0004810,2.42e-20,10;UBERON:0006555,1.22e-19,16;UBERON:0004819,1.22e-19,16;UBERON:0001225,4.07e-17,12;UBERON:0008987,4.07e-17,12;UBERON:0000353,9.42e-14,15;UBERON:0004913,9.73e-14,1;UBERON:0003703,9.73e-14,1;UBERON:0001174,9.73e-14,1;UBERON:0004914,9.73e-14,1;UBERON:0002113,4.39e-12,26;UBERON:0003918,4.39e-12,26;UBERON:0011143,4.39e-12,26;UBERON:0005095,4.39e-12,26;UBERON:0007687,4.39e-12,26;UBERON:0000489,4.00e-10,31;UBERON:0002394,2.78e-09,6;UBERON:0003928,2.78e-09,6;UBERON:0005172,4.42e-08,54;UBERON:0005173,4.42e-08,54;UBERON:0009569,4.50e-08,112;UBERON:0006955,1.87e-07,2;UBERON:0004801,1.87e-07,2;UBERON:0002417,3.11e-07,60;UBERON:0000916,3.11e-07,60;UBERON:0005177,3.92e-07,101 | |||
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| ||
|short_description=p@chr17:18160552..18160565,- | |short_description=p@chr17:18160552..18160565,- | ||
}} | }} |
Latest revision as of 14:26, 25 July 2015
Short description: | p@chr17:18160552..18160565, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:18160552..18160565, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.48e-38 | 3 |
kidney cortex tubule cell | 3.48e-38 | 3 |
epithelial cell of proximal tubule | 3.48e-38 | 3 |
epithelial cell of nephron | 6.01e-21 | 15 |
kidney tubule cell | 2.42e-20 | 10 |
nephron tubule epithelial cell | 2.42e-20 | 10 |
kidney cell | 1.73e-18 | 17 |
kidney epithelial cell | 1.73e-18 | 17 |
kidney cortical cell | 4.07e-17 | 12 |
renal cortical epithelial cell | 4.07e-17 | 12 |
epithelial cell | 8.01e-11 | 253 |
cortical cell of adrenal gland | 1.12e-07 | 2 |
epithelial cell of cervix | 1.87e-07 | 2 |
corneal epithelial cell | 1.99e-07 | 2 |
meso-epithelial cell | 5.78e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.48e-38 | 3 |
region of nephron tubule | 3.48e-38 | 3 |
proximal tubule | 3.48e-38 | 3 |
cortex | 5.09e-21 | 15 |
nephron epithelium | 6.01e-21 | 15 |
renal tubule | 6.01e-21 | 15 |
nephron tubule | 6.01e-21 | 15 |
nephron | 6.01e-21 | 15 |
uriniferous tubule | 6.01e-21 | 15 |
nephrogenic mesenchyme | 6.01e-21 | 15 |
nephron tubule epithelium | 2.42e-20 | 10 |
excretory tube | 1.22e-19 | 16 |
kidney epithelium | 1.22e-19 | 16 |
cortex of kidney | 4.07e-17 | 12 |
renal parenchyma | 4.07e-17 | 12 |
parenchyma | 9.42e-14 | 15 |
hepatopancreatic ampulla | 9.73e-14 | 1 |
extrahepatic bile duct | 9.73e-14 | 1 |
common bile duct | 9.73e-14 | 1 |
duodenal papilla | 9.73e-14 | 1 |
kidney | 4.39e-12 | 26 |
kidney mesenchyme | 4.39e-12 | 26 |
upper urinary tract | 4.39e-12 | 26 |
kidney rudiment | 4.39e-12 | 26 |
kidney field | 4.39e-12 | 26 |
cavitated compound organ | 4.00e-10 | 31 |
bile duct | 2.78e-09 | 6 |
digestive system duct | 2.78e-09 | 6 |
abdomen element | 4.42e-08 | 54 |
abdominal segment element | 4.42e-08 | 54 |
subdivision of trunk | 4.50e-08 | 112 |
uterine epithelium | 1.87e-07 | 2 |
cervix epithelium | 1.87e-07 | 2 |
abdominal segment of trunk | 3.11e-07 | 60 |
abdomen | 3.11e-07 | 60 |
trunk region element | 3.92e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.10e-13 | 1 |
mucinous cystadenocarcinoma | 1.10e-13 | 1 |
tubular adenocarcinoma | 1.64e-07 | 2 |