FFCP PHASE1:Hg19::chr11:129939779..129939801,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=334 | |EntrezGene=334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=598 | |HGNC=598 | ||
|TSSclassifier=strong | |||
|UniProt=Q06481,Q9UED0,E9PJ13,E9PSC7,E9PQS3,E9PK76,F5H845 | |UniProt=Q06481,Q9UED0,E9PJ13,E9PSC7,E9PQS3,E9PK76,F5H845 | ||
|association_with_transcript=0bp_to_ENST00000263574,ENST00000524449,ENST00000526330,ENST00000527702,ENST00000528499,ENST00000529235,ENST00000529701,ENST00000530132,ENST00000530416,ENST00000533195,ENST00000533532,ENST00000533618,ENST00000533713,ENST00000534001,ENST00000534582,ENST00000534761,ENST00000539648_5end | |||
|cluster_id=chr11:129939779..129939801,+ | |||
|description=CAGE_peak_1_at_APLP2_5end | |||
|id=chr11:129939779..129939801,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.58e-22!63;CL:0000576!2.58e-22!63;CL:0000040!2.58e-22!63;CL:0000559!2.58e-22!63;CL:0000766!2.15e-21!76;CL:0002057!2.65e-21!42;CL:0002009!8.87e-21!65;CL:0000860!8.75e-18!45;CL:0000839!1.52e-17!70;CL:0000557!3.99e-17!71;CL:0000763!1.77e-10!112;CL:0000049!1.77e-10!112;CL:0002139!3.01e-10!24;CL:0000115!1.32e-08!35;CL:0002078!7.30e-08!44;CL:0000213!1.47e-07!57;CL:0000215!1.47e-07!57;CL:0000223!1.62e-07!59;CL:0000071!2.98e-07!18;CL:0002546!2.98e-07!18;CL:0000066!7.17e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-19;33!CL:0002057;1.32e-19;33!CL:0000473;3.06e-19;39!CL:0000234;3.06e-19;39!CL:0000576;2.94e-15;48!CL:0000766;5.31e-11;69!CL:0002139;3.01e-10;24!CL:0000115;6.69e-08;36!CL:0000071;2.97e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.65e-26,59;CL:0000576,5.65e-26,59;CL:0000040,5.65e-26,59;CL:0000559,5.65e-26,59;CL:0000473,1.41e-24,48;CL:0000234,1.41e-24,48;CL:0000766,1.70e-24,72;CL:0002009,3.54e-24,61;CL:0000860,2.65e-21,42;CL:0002057,2.65e-21,42;CL:0000839,2.09e-20,66;CL:0000557,6.56e-20,67;CL:0000763,5.96e-12,108;CL:0000049,5.96e-12,108;CL:0002139,3.01e-10,24;CL:0000115,5.20e-09,36;CL:0002078,3.09e-08,45;CL:0000213,6.69e-08,58;CL:0000215,6.69e-08,58;CL:0000223,2.64e-07,58;CL:0000071,2.98e-07,18;CL:0002546,2.98e-07,18;CL:0000066,5.93e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;9.84e-16;42!CL:0002546;2.97e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!4.69e-22!625;UBERON:0000480!1.17e-21!626;UBERON:0000468!1.33e-20!659;UBERON:0002371!3.11e-15!80;UBERON:0000062!5.31e-15!511;UBERON:0000923!1.44e-14!604;UBERON:0005291!1.44e-14!604;UBERON:0006598!1.44e-14!604;UBERON:0002532!1.44e-14!604;UBERON:0002050!1.55e-14!605;UBERON:0005423!1.55e-14!605;UBERON:0000922!2.47e-14!612;UBERON:0004765!1.02e-13!101;UBERON:0001434!1.02e-13!101;UBERON:0002405!6.19e-13!115;UBERON:0001474!6.54e-13!86;UBERON:0000926!3.20e-11!448;UBERON:0004120!3.20e-11!448;UBERON:0006603!3.20e-11!448;UBERON:0003081!2.91e-10!216;UBERON:0002193!3.49e-09!112;UBERON:0002390!2.20e-08!102;UBERON:0003061!2.20e-08!102;UBERON:0004111!5.99e-08!241;UBERON:0000487!1.16e-07!22;UBERON:0006914!1.32e-07!25;UBERON:0002204!1.46e-07!167;UBERON:0001986!2.98e-07!18;UBERON:0004638!2.98e-07!18;UBERON:0004852!2.98e-07!18;UBERON:0000025!3.60e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.15e-07;22!UBERON:0006914;1.32e-07;25!UBERON:0004638;2.97e-07;18!UBERON:0001986;2.97e-07;18!UBERON:0004852;2.97e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.35e-17,76;UBERON:0004765,5.36e-16,90;UBERON:0001434,1.03e-15,100;UBERON:0001474,6.41e-15,82;UBERON:0005423,2.81e-14,581;UBERON:0002405,8.51e-14,93;UBERON:0000922,1.30e-13,592;UBERON:0002050,1.98e-13,564;UBERON:0000923,8.53e-13,560;UBERON:0010316,8.53e-13,560;UBERON:0005291,8.53e-13,560;UBERON:0006598,8.53e-13,560;UBERON:0010317,8.53e-13,560;UBERON:0002532,8.53e-13,560;UBERON:0003081,2.49e-11,203;UBERON:0002193,1.56e-10,108;UBERON:0002390,1.00e-09,98;UBERON:0003061,1.00e-09,98;UBERON:0000926,1.94e-09,315;UBERON:0004120,1.94e-09,315;UBERON:0006603,1.94e-09,315;UBERON:0002204,1.46e-08,167;UBERON:0004111,4.94e-08,240;UBERON:0000487,1.16e-07,22;UBERON:0006914,1.32e-07,25;UBERON:0000025,2.82e-07,192;UBERON:0004638,2.98e-07,18;UBERON:0001986,2.98e-07,18;UBERON:0004852,2.98e-07,18;UBERON:0003914,9.10e-07,117 | |||
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84606466 | ||
|short_description=p1@APLP2 | |||
}} | }} |
Latest revision as of 17:51, 16 September 2015
Short description: | p1@APLP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APLP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263574, ENST00000524449, ENST00000526330, ENST00000527702, ENST00000528499, ENST00000529235, ENST00000529701, ENST00000530132, ENST00000530416, ENST00000533195, ENST00000533532, ENST00000533618, ENST00000533713, ENST00000534001, ENST00000534582, ENST00000534761, ENST00000539648_5end |
EntrezGene: | APLP2 |
HGNC: | 598 |
UniProt: | Q06481Q9UED0E9PJ13E9PSC7E9PQS3E9PK76F5H845 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.65e-26 | 59 |
monocyte | 5.65e-26 | 59 |
monoblast | 5.65e-26 | 59 |
promonocyte | 5.65e-26 | 59 |
defensive cell | 1.41e-24 | 48 |
phagocyte | 1.41e-24 | 48 |
myeloid leukocyte | 1.70e-24 | 72 |
macrophage dendritic cell progenitor | 3.54e-24 | 61 |
classical monocyte | 2.65e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.65e-21 | 42 |
myeloid lineage restricted progenitor cell | 2.09e-20 | 66 |
granulocyte monocyte progenitor cell | 6.56e-20 | 67 |
myeloid cell | 5.96e-12 | 108 |
common myeloid progenitor | 5.96e-12 | 108 |
endothelial cell of vascular tree | 3.01e-10 | 24 |
endothelial cell | 5.20e-09 | 36 |
meso-epithelial cell | 3.09e-08 | 45 |
lining cell | 6.69e-08 | 58 |
barrier cell | 6.69e-08 | 58 |
endodermal cell | 2.64e-07 | 58 |
blood vessel endothelial cell | 2.98e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.98e-07 | 18 |
epithelial cell | 5.93e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.35e-17 | 76 |
skeletal element | 5.36e-16 | 90 |
skeletal system | 1.03e-15 | 100 |
bone element | 6.41e-15 | 82 |
developing anatomical structure | 2.81e-14 | 581 |
immune system | 8.51e-14 | 93 |
embryo | 1.30e-13 | 592 |
embryonic structure | 1.98e-13 | 564 |
germ layer | 8.53e-13 | 560 |
germ layer / neural crest | 8.53e-13 | 560 |
embryonic tissue | 8.53e-13 | 560 |
presumptive structure | 8.53e-13 | 560 |
germ layer / neural crest derived structure | 8.53e-13 | 560 |
epiblast (generic) | 8.53e-13 | 560 |
lateral plate mesoderm | 2.49e-11 | 203 |
hemolymphoid system | 1.56e-10 | 108 |
hematopoietic system | 1.00e-09 | 98 |
blood island | 1.00e-09 | 98 |
mesoderm | 1.94e-09 | 315 |
mesoderm-derived structure | 1.94e-09 | 315 |
presumptive mesoderm | 1.94e-09 | 315 |
musculoskeletal system | 1.46e-08 | 167 |
anatomical conduit | 4.94e-08 | 240 |
simple squamous epithelium | 1.16e-07 | 22 |
squamous epithelium | 1.32e-07 | 25 |
tube | 2.82e-07 | 192 |
blood vessel endothelium | 2.98e-07 | 18 |
endothelium | 2.98e-07 | 18 |
cardiovascular system endothelium | 2.98e-07 | 18 |
epithelial tube | 9.10e-07 | 117 |