FFCP PHASE1:Hg19::chr2:149402275..149402341,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26122 | |EntrezGene=26122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24543 | |HGNC=24543 | ||
|TSSclassifier=strong | |||
|UniProt=Q52LR7 | |UniProt=Q52LR7 | ||
|association_with_transcript=-211bp_to_ENST00000258484_5end | |association_with_transcript=-211bp_to_ENST00000258484_5end | ||
|cluster_id=chr2:149402275..149402341,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_EPC2_5end | |description=CAGE_peak_1_at_EPC2_5end | ||
|id=chr2:149402275..149402341,+ | |id=chr2:149402275..149402341,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.21e-27!140;CL:0000037!3.81e-27!172;CL:0000566!3.81e-27!172;CL:0002032!1.79e-24!165;CL:0000837!1.79e-24!165;CL:0002057!8.72e-24!42;CL:0000988!2.57e-23!182;CL:0002031!1.24e-22!124;CL:0000766!6.33e-22!76;CL:0000860!3.50e-21!45;CL:0002087!4.29e-21!119;CL:0000763!1.15e-19!112;CL:0000049!1.15e-19!112;CL:0000557!9.19e-19!71;CL:0000839!9.05e-18!70;CL:0002009!6.28e-17!65;CL:0002194!3.84e-16!63;CL:0000576!3.84e-16!63;CL:0000040!3.84e-16!63;CL:0000559!3.84e-16!63;CL:0000791!3.22e-09!18;CL:0000789!3.22e-09!18;CL:0002420!3.22e-09!18;CL:0002419!3.22e-09!18;CL:0000790!3.22e-09!18 | |ontology_enrichment_celltype=CL:0000738!2.21e-27!140;CL:0000037!3.81e-27!172;CL:0000566!3.81e-27!172;CL:0002032!1.79e-24!165;CL:0000837!1.79e-24!165;CL:0002057!8.72e-24!42;CL:0000988!2.57e-23!182;CL:0002031!1.24e-22!124;CL:0000766!6.33e-22!76;CL:0000860!3.50e-21!45;CL:0002087!4.29e-21!119;CL:0000763!1.15e-19!112;CL:0000049!1.15e-19!112;CL:0000557!9.19e-19!71;CL:0000839!9.05e-18!70;CL:0002009!6.28e-17!65;CL:0002194!3.84e-16!63;CL:0000576!3.84e-16!63;CL:0000040!3.84e-16!63;CL:0000559!3.84e-16!63;CL:0000791!3.22e-09!18;CL:0000789!3.22e-09!18;CL:0002420!3.22e-09!18;CL:0002419!3.22e-09!18;CL:0000790!3.22e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-18;33!CL:0002057;1.83e-18;33!CL:0000576;8.72e-15;48!CL:0000473;6.10e-13;39!CL:0000234;6.10e-13;39!CL:0000766;1.13e-11;69!CL:0000791;2.88e-09;18!CL:0000789;2.88e-09;18!CL:0002419;2.88e-09;18!CL:0002087;1.58e-08;104!CL:0000763;1.10e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.74e-29,136;CL:0000037,5.74e-29,168;CL:0002032,3.18e-26,161;CL:0000837,3.18e-26,161;CL:0000988,1.40e-25,177;CL:0000766,1.05e-24,72;CL:0002031,1.22e-24,120;CL:0000860,8.72e-24,42;CL:0002057,8.72e-24,42;CL:0002087,4.63e-23,115;CL:0000763,1.28e-21,108;CL:0000049,1.28e-21,108;CL:0000557,2.25e-21,67;CL:0000473,1.40e-20,48;CL:0000234,1.40e-20,48;CL:0000839,2.63e-20,66;CL:0002009,1.63e-19,61;CL:0002194,1.07e-18,59;CL:0000576,1.07e-18,59;CL:0000040,1.07e-18,59;CL:0000559,1.07e-18,59;CL:0000791,3.22e-09,18;CL:0000789,3.22e-09,18;CL:0002420,3.22e-09,18;CL:0002419,3.22e-09,18;CL:0000790,3.22e-09,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.55e-17;42!CL:0000790;2.88e-09;18!CL:0000049;7.97e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.11e-21!115;UBERON:0002390!1.62e-19!102;UBERON:0003061!1.62e-19!102;UBERON:0002193!1.26e-16!112;UBERON:0002371!1.96e-14!80;UBERON:0001474!2.53e-14!86;UBERON:0004765!8.97e-11!101;UBERON:0001434!8.97e-11!101;UBERON:0002405!1.11e-09!115;UBERON:0001049!6.28e-09!57;UBERON:0005068!6.28e-09!57;UBERON:0006241!6.28e-09!57;UBERON:0007135!6.28e-09!57;UBERON:0002780!6.35e-09!41;UBERON:0001890!6.35e-09!41;UBERON:0006240!6.35e-09!41;UBERON:0003080!9.61e-09!42;UBERON:0001017!1.05e-07!82;UBERON:0000073!1.96e-07!94;UBERON:0001016!1.96e-07!94;UBERON:0002020!2.24e-07!34;UBERON:0003528!2.24e-07!34;UBERON:0001893!2.29e-07!34;UBERON:0002791!3.84e-07!33;UBERON:0002616!4.58e-07!59;UBERON:0001869!4.89e-07!32;UBERON:0005743!6.29e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.39e-07;41!UBERON:0001890;8.39e-07;41!UBERON:0007023;8.76e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-21,98;UBERON:0003061,1.37e-21,98;UBERON:0007023,1.35e-20,114;UBERON:0002193,2.29e-18,108;UBERON:0002371,2.03e-16,76;UBERON:0001474,3.36e-16,82;UBERON:0002405,1.60e-14,93;UBERON:0004765,1.48e-13,90;UBERON:0001434,1.29e-11,100;UBERON:0001049,4.59e-09,56;UBERON:0005068,4.59e-09,56;UBERON:0006241,4.59e-09,56;UBERON:0007135,4.59e-09,56;UBERON:0002780,6.35e-09,41;UBERON:0001890,6.35e-09,41;UBERON:0003080,6.35e-09,41;UBERON:0006240,6.35e-09,41;UBERON:0000073,1.07e-08,53;UBERON:0002616,1.07e-08,53;UBERON:0001016,2.81e-08,89;UBERON:0001017,8.75e-08,81;UBERON:0003528,2.24e-07,34;UBERON:0002020,2.24e-07,34;UBERON:0001893,2.29e-07,34;UBERON:0001869,4.89e-07,32;UBERON:0002791,5.19e-07,32 | |||
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| ||
|short_description=p1@EPC2 | |short_description=p1@EPC2 | ||
}} | }} |
Latest revision as of 09:58, 17 September 2015
Short description: | p1@EPC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPC2_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | -211bp_to_ENST00000258484_5end |
EntrezGene: | EPC2 |
HGNC: | 24543 |
UniProt: | Q52LR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.74e-29 | 136 |
hematopoietic stem cell | 5.74e-29 | 168 |
hematopoietic oligopotent progenitor cell | 3.18e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.18e-26 | 161 |
hematopoietic cell | 1.40e-25 | 177 |
myeloid leukocyte | 1.05e-24 | 72 |
hematopoietic lineage restricted progenitor cell | 1.22e-24 | 120 |
classical monocyte | 8.72e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.72e-24 | 42 |
nongranular leukocyte | 4.63e-23 | 115 |
myeloid cell | 1.28e-21 | 108 |
common myeloid progenitor | 1.28e-21 | 108 |
granulocyte monocyte progenitor cell | 2.25e-21 | 67 |
defensive cell | 1.40e-20 | 48 |
phagocyte | 1.40e-20 | 48 |
myeloid lineage restricted progenitor cell | 2.63e-20 | 66 |
macrophage dendritic cell progenitor | 1.63e-19 | 61 |
monopoietic cell | 1.07e-18 | 59 |
monocyte | 1.07e-18 | 59 |
monoblast | 1.07e-18 | 59 |
promonocyte | 1.07e-18 | 59 |
mature alpha-beta T cell | 3.22e-09 | 18 |
alpha-beta T cell | 3.22e-09 | 18 |
immature T cell | 3.22e-09 | 18 |
mature T cell | 3.22e-09 | 18 |
immature alpha-beta T cell | 3.22e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.37e-21 | 98 |
blood island | 1.37e-21 | 98 |
adult organism | 1.35e-20 | 114 |
hemolymphoid system | 2.29e-18 | 108 |
bone marrow | 2.03e-16 | 76 |
bone element | 3.36e-16 | 82 |
immune system | 1.60e-14 | 93 |
skeletal element | 1.48e-13 | 90 |
skeletal system | 1.29e-11 | 100 |
neural tube | 4.59e-09 | 56 |
neural rod | 4.59e-09 | 56 |
future spinal cord | 4.59e-09 | 56 |
neural keel | 4.59e-09 | 56 |
regional part of forebrain | 6.35e-09 | 41 |
forebrain | 6.35e-09 | 41 |
anterior neural tube | 6.35e-09 | 41 |
future forebrain | 6.35e-09 | 41 |
regional part of nervous system | 1.07e-08 | 53 |
regional part of brain | 1.07e-08 | 53 |
nervous system | 2.81e-08 | 89 |
central nervous system | 8.75e-08 | 81 |
brain grey matter | 2.24e-07 | 34 |
gray matter | 2.24e-07 | 34 |
telencephalon | 2.29e-07 | 34 |
cerebral hemisphere | 4.89e-07 | 32 |
regional part of telencephalon | 5.19e-07 | 32 |