FFCP PHASE1:Hg19::chr19:36001386..36001429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93099 | |EntrezGene=93099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25063 | |HGNC=25063 | ||
|TSSclassifier=strong | |||
|UniProt=Q6E0U4 | |UniProt=Q6E0U4 | ||
|association_with_transcript=0bp_to_ENST00000461300,ENST00000462126,ENST00000462538,ENST00000463292,ENST00000480507,NM_001126059,NR_033746,uc002nzk.3,uc002nzl.3,uc002nzp.2,uc002nzq.2,uc002nzr.2,uc002nzs.2,uc002nzt.2,uc002nzu.2,uc002nzv.2,uc002nzw.2,uc002nzx.3,uc002nzy.3,uc010xsv.1,uc010xsw.1_5end | |association_with_transcript=0bp_to_ENST00000461300,ENST00000462126,ENST00000462538,ENST00000463292,ENST00000480507,NM_001126059,NR_033746,uc002nzk.3,uc002nzl.3,uc002nzp.2,uc002nzq.2,uc002nzr.2,uc002nzs.2,uc002nzt.2,uc002nzu.2,uc002nzv.2,uc002nzw.2,uc002nzx.3,uc002nzy.3,uc010xsv.1,uc010xsw.1_5end | ||
|cluster_id=chr19:36001386..36001429,- | |||
|coexpression_cluster_id=C2484 | |||
|description=CAGE_peak_4_at_DMKN_5end | |description=CAGE_peak_4_at_DMKN_5end | ||
|id=chr19:36001386..36001429,- | |id=chr19:36001386..36001429,- | ||
|ontology_enrichment_celltype=CL:0000066!3.23e-29!254;CL:0002076!9.10e-13!43;CL:0000223!1.39e-08!59;CL:0002077!4.61e-07!33 | |ontology_enrichment_celltype=CL:0000066!3.23e-29!254;CL:0002076!9.10e-13!43;CL:0000223!1.39e-08!59;CL:0002077!4.61e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.46e-12;42!CL:0002251;6.33e-08;20!CL:0002368;1.76e-07;13!CL:1000507;5.50e-07;10!CL:1000494;5.50e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.33e-40,253;CL:0002076,8.36e-16,42;CL:0000223,1.19e-11,58;CL:0002251,5.23e-08,20;CL:0002368,1.61e-07,13;CL:0002077,2.60e-07,34;CL:1000507,5.27e-07,10;CL:1000494,5.27e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.44e-08;29 | |||
|ontology_enrichment_disease=DOID:305!2.01e-18!106;DOID:0050687!5.76e-13!143;DOID:1749!7.69e-08!14;DOID:299!9.64e-08!25 | |ontology_enrichment_disease=DOID:305!2.01e-18!106;DOID:0050687!5.76e-13!143;DOID:1749!7.69e-08!14;DOID:299!9.64e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.39e-09;14!DOID:299;1.07e-07;25!DOID:305;7.15e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.51e-23,106;DOID:0050687,3.97e-17,143;DOID:1749,2.98e-09,14;DOID:162,6.52e-08,235;DOID:299,9.57e-08,25;DOID:14566,3.48e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.81e-14!169;UBERON:0000925!2.81e-14!169;UBERON:0006595!2.81e-14!169;UBERON:0001004!3.98e-13!72;UBERON:0000464!3.58e-11!104;UBERON:0000064!3.77e-11!219;UBERON:0001007!5.03e-11!155;UBERON:0001555!5.03e-11!155;UBERON:0007026!5.03e-11!155;UBERON:0000065!9.68e-11!53;UBERON:0004921!3.41e-10!129;UBERON:0004185!3.41e-10!129;UBERON:0008947!4.97e-09!38;UBERON:0003258!4.97e-09!38;UBERON:0000466!5.03e-09!126;UBERON:0000077!5.39e-09!130;UBERON:0001041!9.33e-09!98;UBERON:0000072!1.37e-08!46;UBERON:0000481!2.30e-08!347;UBERON:0000062!3.65e-08!511;UBERON:0001008!6.10e-08!45;UBERON:0005157!7.13e-08!51;UBERON:0006554!8.49e-08!44;UBERON:0005177!2.24e-07!107;UBERON:0000063!4.81e-07!97;UBERON:0002553!8.98e-07!70 | |ontology_enrichment_uberon=UBERON:0004119!2.81e-14!169;UBERON:0000925!2.81e-14!169;UBERON:0006595!2.81e-14!169;UBERON:0001004!3.98e-13!72;UBERON:0000464!3.58e-11!104;UBERON:0000064!3.77e-11!219;UBERON:0001007!5.03e-11!155;UBERON:0001555!5.03e-11!155;UBERON:0007026!5.03e-11!155;UBERON:0000065!9.68e-11!53;UBERON:0004921!3.41e-10!129;UBERON:0004185!3.41e-10!129;UBERON:0008947!4.97e-09!38;UBERON:0003258!4.97e-09!38;UBERON:0000466!5.03e-09!126;UBERON:0000077!5.39e-09!130;UBERON:0001041!9.33e-09!98;UBERON:0000072!1.37e-08!46;UBERON:0000481!2.30e-08!347;UBERON:0000062!3.65e-08!511;UBERON:0001008!6.10e-08!45;UBERON:0005157!7.13e-08!51;UBERON:0006554!8.49e-08!44;UBERON:0005177!2.24e-07!107;UBERON:0000063!4.81e-07!97;UBERON:0002553!8.98e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.35e-08;44!UBERON:0006554;2.27e-08;30!UBERON:0001008;2.27e-08;30!UBERON:0000072;7.54e-08;37!UBERON:0005911;1.41e-07;36!UBERON:0001004;1.66e-07;65!UBERON:0004211;5.50e-07;10!UBERON:0009773;5.50e-07;10!UBERON:0001231;5.50e-07;10!UBERON:0004810;5.50e-07;10!UBERON:0004807;6.09e-07;22 | |||
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| ||
|short_description=p4@DMKN | |short_description=p4@DMKN | ||
}} | }} |
Latest revision as of 12:20, 17 September 2015
Short description: | p4@DMKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DMKN_5end |
Coexpression cluster: | C2484_Alveolar_Mallassezderived_Urothelial_epidermoid_Esophageal_Corneal_endometrial |
Association with transcript: | 0bp_to_ENST00000461300, ENST00000462126, ENST00000462538, ENST00000463292, ENST00000480507, NM_001126059, NR_033746, uc002nzk.3, uc002nzl.3, uc002nzp.2, uc002nzq.2, uc002nzr.2, uc002nzs.2, uc002nzt.2, uc002nzu.2, uc002nzv.2, uc002nzw.2, uc002nzx.3, uc002nzy.3, uc010xsv.1, uc010xsw.1_5end |
EntrezGene: | DMKN |
HGNC: | 25063 |
UniProt: | Q6E0U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.33e-40 | 253 |
endo-epithelial cell | 8.36e-16 | 42 |
endodermal cell | 1.19e-11 | 58 |
epithelial cell of alimentary canal | 5.23e-08 | 20 |
respiratory epithelial cell | 1.61e-07 | 13 |
ecto-epithelial cell | 2.60e-07 | 34 |
kidney tubule cell | 5.27e-07 | 10 |
nephron tubule epithelial cell | 5.27e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.70e-16 | 160 |
endoderm | 9.70e-16 | 160 |
presumptive endoderm | 9.70e-16 | 160 |
digestive system | 2.52e-12 | 145 |
digestive tract | 2.52e-12 | 145 |
primitive gut | 2.52e-12 | 145 |
respiratory system | 2.86e-12 | 74 |
subdivision of digestive tract | 7.32e-12 | 118 |
respiratory primordium | 5.23e-11 | 38 |
endoderm of foregut | 5.23e-11 | 38 |
foregut | 1.50e-10 | 87 |
respiratory tract | 2.62e-10 | 54 |
renal system | 3.07e-10 | 48 |
urinary system structure | 4.62e-10 | 47 |
trunk region element | 6.81e-09 | 101 |
epithelial bud | 1.32e-08 | 37 |
epithelial fold | 3.28e-08 | 47 |
endo-epithelium | 5.57e-08 | 82 |
segment of respiratory tract | 7.14e-08 | 47 |
organ system subdivision | 1.09e-07 | 223 |
subdivision of trunk | 1.55e-07 | 112 |
kidney | 4.55e-07 | 26 |
kidney mesenchyme | 4.55e-07 | 26 |
upper urinary tract | 4.55e-07 | 26 |
kidney rudiment | 4.55e-07 | 26 |
kidney field | 4.55e-07 | 26 |
nephron tubule epithelium | 5.27e-07 | 10 |
cavitated compound organ | 6.95e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.51e-23 | 106 |
cell type cancer | 3.97e-17 | 143 |
squamous cell carcinoma | 2.98e-09 | 14 |
cancer | 6.52e-08 | 235 |
adenocarcinoma | 9.57e-08 | 25 |
disease of cellular proliferation | 3.48e-07 | 239 |