FFCP PHASE1:Hg19::chr20:54987305..54987337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57091 | |EntrezGene=57091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15878 | |HGNC=15878 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ75,B4DII4 | |UniProt=Q9NQ75,B4DII4 | ||
|association_with_transcript=0bp_to_ENST00000371336,ENST00000434344,NM_001164114,NM_001164115,NM_020356,uc002xxq.3,uc002xxr.2,uc010gio.2,uc010zze.1_5end | |association_with_transcript=0bp_to_ENST00000371336,ENST00000434344,NM_001164114,NM_001164115,NM_020356,uc002xxq.3,uc002xxr.2,uc010gio.2,uc010zze.1_5end | ||
|cluster_id=chr20:54987305..54987337,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_CASS4_5end | |description=CAGE_peak_1_at_CASS4_5end | ||
|id=chr20:54987305..54987337,+ | |id=chr20:54987305..54987337,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.26e-42!112;CL:0000049!3.26e-42!112;CL:0000037!6.41e-42!172;CL:0000566!6.41e-42!172;CL:0002032!8.01e-40!165;CL:0000837!8.01e-40!165;CL:0000988!5.62e-38!182;CL:0000738!8.87e-37!140;CL:0000766!5.77e-35!76;CL:0000557!3.06e-29!71;CL:0002009!2.02e-27!65;CL:0000839!7.78e-27!70;CL:0002031!3.85e-26!124;CL:0002057!4.91e-26!42;CL:0002194!8.55e-26!63;CL:0000576!8.55e-26!63;CL:0000040!8.55e-26!63;CL:0000559!8.55e-26!63;CL:0002087!1.07e-24!119;CL:0000860!5.60e-23!45;CL:0000134!3.01e-15!358;CL:0002320!2.99e-14!365;CL:0000791!7.40e-12!18;CL:0000789!7.40e-12!18;CL:0002420!7.40e-12!18;CL:0002419!7.40e-12!18;CL:0000790!7.40e-12!18;CL:0000219!7.44e-10!390;CL:0000048!1.24e-09!430;CL:0000723!7.82e-09!436;CL:0000034!9.89e-09!444;CL:0000625!1.80e-08!11;CL:0000084!1.87e-08!25;CL:0000827!1.87e-08!25;CL:0000094!2.79e-08!8;CL:0000451!2.94e-08!10;CL:0000990!2.68e-07!8 | |ontology_enrichment_celltype=CL:0000763!3.26e-42!112;CL:0000049!3.26e-42!112;CL:0000037!6.41e-42!172;CL:0000566!6.41e-42!172;CL:0002032!8.01e-40!165;CL:0000837!8.01e-40!165;CL:0000988!5.62e-38!182;CL:0000738!8.87e-37!140;CL:0000766!5.77e-35!76;CL:0000557!3.06e-29!71;CL:0002009!2.02e-27!65;CL:0000839!7.78e-27!70;CL:0002031!3.85e-26!124;CL:0002057!4.91e-26!42;CL:0002194!8.55e-26!63;CL:0000576!8.55e-26!63;CL:0000040!8.55e-26!63;CL:0000559!8.55e-26!63;CL:0002087!1.07e-24!119;CL:0000860!5.60e-23!45;CL:0000134!3.01e-15!358;CL:0002320!2.99e-14!365;CL:0000791!7.40e-12!18;CL:0000789!7.40e-12!18;CL:0002420!7.40e-12!18;CL:0002419!7.40e-12!18;CL:0000790!7.40e-12!18;CL:0000219!7.44e-10!390;CL:0000048!1.24e-09!430;CL:0000723!7.82e-09!436;CL:0000034!9.89e-09!444;CL:0000625!1.80e-08!11;CL:0000084!1.87e-08!25;CL:0000827!1.87e-08!25;CL:0000094!2.79e-08!8;CL:0000451!2.94e-08!10;CL:0000990!2.68e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.40e-30;33!CL:0002057;6.40e-30;33!CL:0000473;1.21e-27;39!CL:0000234;1.21e-27;39!CL:0000576;7.45e-21;48!CL:0000766;1.45e-19;69!CL:0000791;1.34e-17;18!CL:0000789;1.34e-17;18!CL:0002419;1.34e-17;18!CL:0000763;4.69e-13;100!CL:0000625;4.17e-12;11!CL:0000094;9.58e-12;8!CL:0000451;9.72e-12;10!CL:0000738;1.64e-11;136!CL:0000084;4.40e-11;25!CL:0002087;2.16e-10;104!CL:0000990;2.37e-10;8!CL:0000624;1.56e-08;6!CL:0000988;2.10e-08;177!CL:0000081;6.75e-08;11!CL:0000840;1.79e-07;5!CL:0000453;4.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.03e-55,136;CL:0000037,7.43e-54,168;CL:0002032,2.70e-50,161;CL:0000837,2.70e-50,161;CL:0000763,3.84e-50,108;CL:0000049,3.84e-50,108;CL:0000766,9.85e-50,72;CL:0000988,2.28e-49,177;CL:0000557,2.20e-41,67;CL:0002009,1.18e-39,61;CL:0002031,1.28e-38,120;CL:0000473,1.57e-38,48;CL:0000234,1.57e-38,48;CL:0000839,4.82e-38,66;CL:0002194,3.59e-37,59;CL:0000576,3.59e-37,59;CL:0000040,3.59e-37,59;CL:0000559,3.59e-37,59;CL:0002087,3.63e-37,115;CL:0000860,1.07e-35,42;CL:0002057,1.07e-35,42;CL:0000134,7.89e-19,354;CL:0002320,8.44e-18,361;CL:0000791,1.56e-17,18;CL:0000789,1.56e-17,18;CL:0002420,1.56e-17,18;CL:0002419,1.56e-17,18;CL:0000790,1.56e-17,18;CL:0000219,3.08e-14,386;CL:0000625,4.98e-12,11;CL:0000094,9.67e-12,8;CL:0000451,1.05e-11,10;CL:0000048,2.56e-11,427;CL:0000084,4.85e-11,25;CL:0000827,4.85e-11,25;CL:0000034,9.57e-11,441;CL:0000723,1.01e-10,433;CL:0000990,2.96e-10,8;CL:0000624,1.52e-08,6;CL:0000081,6.79e-08,11;CL:0000840,2.00e-07,5;CL:0001029,2.00e-07,5;CL:0000453,5.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-25;42!CL:0000790;1.34e-17;18!CL:0000049;6.48e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.08e-30!102;UBERON:0003061!1.08e-30!102;UBERON:0002193!8.55e-28!112;UBERON:0002371!6.55e-23!80;UBERON:0001474!2.57e-20!86;UBERON:0002405!8.99e-16!115;UBERON:0004765!2.76e-15!101;UBERON:0001434!2.76e-15!101;UBERON:0007023!9.05e-14!115;UBERON:0002384!2.31e-13!375;UBERON:0003081!1.56e-07!216;UBERON:0000178!2.43e-07!15;UBERON:0000179!2.43e-07!15;UBERON:0000463!2.43e-07!15;UBERON:0002204!4.53e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.56e-11;15!UBERON:0000179;2.56e-11;15!UBERON:0000463;2.56e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.70e-47,98;UBERON:0003061,1.70e-47,98;UBERON:0002193,1.84e-43,108;UBERON:0002371,3.26e-34,76;UBERON:0002405,3.44e-33,93;UBERON:0001474,2.49e-30,82;UBERON:0004765,5.46e-26,90;UBERON:0001434,1.37e-21,100;UBERON:0002384,6.02e-17,371;UBERON:0003081,6.71e-14,203;UBERON:0000178,2.78e-11,15;UBERON:0000179,2.78e-11,15;UBERON:0000463,2.78e-11,15;UBERON:0002204,1.87e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,12.194292582316,15.7370053219857,14.243083345079,0,0,0,0,0,0,3.87796785972314,9.6261334785668,4.99125002646459,0.671746422719773,1.94336199611388,1.28787783817093,15.703009788193,10.2026504795979,12.3717871205786,8.36744532860465,8.63452564845834,9.60089749774821,5.17846306179871,3.58624989140741,5.20260905754887,11.721353145045,13.5551783552603,5.41705946377367,12.4239944098119,6.82265375144614,8.31476892446813,10.4068523406107,6.73950956859797,26.2128221577607,9.89553900560148,6.38283704389222,9.37694451171927,2.90209238628584,1.13477044938228,4.9825779919646,5.7787193009051,5.21482918420201,4.56096573880745,1.81619850790011,1.47311054395026,2.84816148696796,2.5350634357433,1.91343869968539,1.25795187305026,9.2109477540126,7.50884464207532,10.125711961916,0.570025487482497,1.39241674039363,0.730656615058536,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,1.32171328579026,1.68152568894461,0.263384084775077,18.2940086205865,31.4408610199332,25.7001873749387,3.00935691703221,6.51844533267181,5.20792586308207,7.79306913631645,20.8337554375275,6.48132996444642,3.76607620792156,2.16643091012012,6.14838334683241,8.06367954871245,11.8395291314647,11.6067007470056,17.3881851441032,18.0909607057714,15.2498272011136,17.7710390468461,9.97122215738582,21.4603476417076,9.62156847351364,15.1811815211702,6.05274287215784,3.25541726928209,5.70271226669025,7.37818083481087,5.50342427963999,6.24653632761729,3.55165878066025,4.10563998460523,9.67712367478716,37.7090676054745,17.2341040620531,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,1.5062593682237,0,0,3.24547393654683,6.09454080547435,4.78648657867915,3.57735936458013,1.71598473234038,5.20040501861391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,187.12819275921,147.356500376364,0,0.993943903390637,0.12663051166458,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0.438977620880838,0.30648779579902,0,0.226864366320042,9.86642996288741,1.06778694409284,1.27159140695737,3.60109315301283,3.7098910525838,0,0,0.168776332241266,0.292311015483596,8.07788077581166,5.79914361446486,0.161646056818812,1.42003837006646,0.503760491138201,1.52604533079439,0,0,0,0,0,0,0,0,0,1.56449532329816,0,8.28809528114883,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,2.10603838625314,3.12125440806329,0,0,0,0,0,0,81.2894342528307,4.0502279646084,1.4512968087854,0.720599767084807,3.40854570251226,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,1.03417372606222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,6.52934218861764,6.32501818449095,0,0,0,0.144781306667579,0,0,0,13.3980916937311,19.6221093122161,9.88241379354062,0.254094624222463,0,0,0,0,215.714022896789,275.228542467703,189.802305153704,0,0,0,0,1.24900292158013,0,0,0.300946099727719,0,0,0,2.58116835958384,0.695068915744663,0.195801157462741,0,8.06395301879261,16.6099934630335,9.81893531791688,0,1.66435439510497,0,0.496215615637554,0,0,0.128139149255701,0,0,0,0,0.710246901252508,0.328508624055237,0,0.348631135379878,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0.255679882248303,0.801288320820636,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,1.116475108079,0,0.38126038784765,3.83846686967001,0.42793898803392,0,0,0,0,0,0.606547444719948,0,0,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0.578775534266688,2.62357900818653,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,20.2979043692868,16.0573813499899,23.9251818613148,11.4351252219739,11.1067813733272,20.751145958167,16.2009431171434,23.0006301125338,0,0,0,0,0,0.142283686696828,0.159426272728822,1.79621434289535,5.745161103971,17.99225453153,1.94773164164733,1.68478306868075,1.36940807419915,0.156679895773023,2.50634477090067,6.60237933426253,0.1605880751037,0.605399121573143,0.851692475380653,0.343505344755765,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0.811367035427949,0.33307196799782,0,0,1.90460633053462,0,0,2.84136146806413,0,0.296964680832639,0,0.994147647766298,0.844016498463076,0,0,0,1.59398390600856,1.10513566212459,0,0,0,1.55519793830904,0,0,1.02314474045374,0.591860433821602,2.3948309234694,0,0.969332746095218,0.834912883456661,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0.638002319463839,0,2.66517388009317,0,1.2558420511602,0.166211681900156,0.902382642468723,1.17637520590644,1.67821586975843,0.189753732724185,0.476809736941136,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0.943615861729479,0,0,0,0,0,0,4.83962864194656,0,3.60163503882381,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0.253243183823515,0,0,0.640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| ||
|short_description=p1@CASS4 | |short_description=p1@CASS4 | ||
}} | }} |
Latest revision as of 03:09, 17 September 2015
Short description: | p1@CASS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CASS4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000371336, ENST00000434344, NM_001164114, NM_001164115, NM_020356, uc002xxq.3, uc002xxr.2, uc010gio.2, uc010zze.1_5end |
EntrezGene: | CASS4 |
HGNC: | 15878 |
UniProt: | Q9NQ75B4DII4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.70e-47 | 98 |
blood island | 1.70e-47 | 98 |
hemolymphoid system | 1.84e-43 | 108 |
bone marrow | 3.26e-34 | 76 |
immune system | 3.44e-33 | 93 |
bone element | 2.49e-30 | 82 |
skeletal element | 5.46e-26 | 90 |
skeletal system | 1.37e-21 | 100 |
connective tissue | 6.02e-17 | 371 |
lateral plate mesoderm | 6.71e-14 | 203 |
blood | 2.78e-11 | 15 |
haemolymphatic fluid | 2.78e-11 | 15 |
organism substance | 2.78e-11 | 15 |
musculoskeletal system | 1.87e-08 | 167 |