FFCP PHASE1:Hg19::chr14:52780943..52780957,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:52780943..52780957,+
|short_description=p2@PTGER2
|description=CAGE_peak_2_at_PTGER2_5end
|association_with_transcript=-58bp_to_NM_000956,uc001wzr.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5732 | |EntrezGene=5732 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9594 | |HGNC=9594 | ||
|TSSclassifier=strong | |||
|UniProt=P43116 | |UniProt=P43116 | ||
|association_with_transcript=-58bp_to_NM_000956,uc001wzr.2_5end | |||
|cluster_id=chr14:52780943..52780957,+ | |||
|coexpression_cluster_id=C2299 | |||
|description=CAGE_peak_2_at_PTGER2_5end | |||
|id=chr14:52780943..52780957,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.25e-31!42;CL:0000766!2.44e-28!76;CL:0000557!2.60e-28!71;CL:0000839!1.37e-27!70;CL:0000860!1.94e-27!45;CL:0002194!1.54e-26!63;CL:0000576!1.54e-26!63;CL:0000040!1.54e-26!63;CL:0000559!1.54e-26!63;CL:0002009!6.76e-25!65;CL:0002087!1.07e-23!119;CL:0002031!5.45e-23!124;CL:0000738!1.97e-22!140;CL:0000037!1.19e-17!172;CL:0000566!1.19e-17!172;CL:0000988!2.73e-17!182;CL:0002032!7.49e-17!165;CL:0000837!7.49e-17!165;CL:0000763!1.78e-16!112;CL:0000049!1.78e-16!112;CL:0002320!2.84e-13!365;CL:0000791!6.94e-12!18;CL:0000789!6.94e-12!18;CL:0002420!6.94e-12!18;CL:0002419!6.94e-12!18;CL:0000790!6.94e-12!18;CL:0000134!4.47e-11!358;CL:0000048!1.30e-10!430;CL:0000034!6.30e-10!444;CL:0000723!6.58e-10!436;CL:0000219!2.47e-08!390;CL:0000625!5.02e-08!11;CL:0002393!6.02e-08!9;CL:0002397!6.02e-08!9;CL:0000084!4.71e-07!25;CL:0000827!4.71e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.13e-34;33!CL:0002057;2.13e-34;33!CL:0000576;3.10e-29;48!CL:0000473;2.37e-25;39!CL:0000234;2.37e-25;39!CL:0000766;1.49e-20;69!CL:0000791;9.87e-18;18!CL:0000789;9.87e-18;18!CL:0002419;9.87e-18;18!CL:0002087;3.73e-14;104!CL:0000625;1.20e-11;11!CL:0000084;3.72e-11;25!CL:0000763;1.88e-09;100!CL:0002393;1.92e-08;6!CL:0002397;1.92e-08;6!CL:0000738;6.82e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-48,42;CL:0002057,1.30e-48,42;CL:0000473,3.60e-44,48;CL:0000234,3.60e-44,48;CL:0000557,6.72e-39,67;CL:0000766,1.57e-38,72;CL:0000839,8.86e-38,66;CL:0002087,1.40e-37,115;CL:0000738,1.02e-36,136;CL:0002194,1.15e-36,59;CL:0000576,1.15e-36,59;CL:0000040,1.15e-36,59;CL:0000559,1.15e-36,59;CL:0002031,3.26e-36,120;CL:0002009,6.66e-35,61;CL:0000037,2.19e-29,168;CL:0000988,6.09e-29,177;CL:0002032,1.91e-27,161;CL:0000837,1.91e-27,161;CL:0000763,2.94e-23,108;CL:0000049,2.94e-23,108;CL:0000791,5.83e-18,18;CL:0000789,5.83e-18,18;CL:0002420,5.83e-18,18;CL:0002419,5.83e-18,18;CL:0000790,5.83e-18,18;CL:0002320,7.71e-18,361;CL:0000134,1.42e-14,354;CL:0000048,1.52e-13,427;CL:0000034,1.80e-13,441;CL:0000723,7.00e-13,433;CL:0000625,7.80e-12,11;CL:0002393,1.04e-11,9;CL:0002397,1.04e-11,9;CL:0000219,1.86e-11,386;CL:0000084,2.62e-11,25;CL:0000827,2.62e-11,25 | |||
|ontology_enrichment_development_v019=CL:0002057;8.43e-35;42!CL:0000790;9.87e-18;18!CL:0000049;3.27e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.94e-36!102;UBERON:0003061!5.94e-36!102;UBERON:0002193!1.44e-31!112;UBERON:0002371!2.82e-29!80;UBERON:0004765!3.42e-26!101;UBERON:0001434!3.42e-26!101;UBERON:0001474!3.45e-26!86;UBERON:0002204!6.47e-22!167;UBERON:0002405!1.53e-20!115;UBERON:0002384!4.30e-13!375;UBERON:0003081!8.01e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-07;15!UBERON:0000179;1.71e-07;15!UBERON:0000463;1.71e-07;15!UBERON:0002390;9.54e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.01e-46,98;UBERON:0003061,4.01e-46,98;UBERON:0002193,1.52e-39,108;UBERON:0002371,2.02e-39,76;UBERON:0004765,2.39e-39,90;UBERON:0001434,2.03e-38,100;UBERON:0001474,1.55e-36,82;UBERON:0002405,1.16e-32,93;UBERON:0002204,8.24e-28,167;UBERON:0002384,1.94e-16,371;UBERON:0003081,2.07e-15,203;UBERON:0000926,7.41e-14,315;UBERON:0004120,7.41e-14,315;UBERON:0006603,7.41e-14,315;UBERON:0000178,1.72e-07,15;UBERON:0000179,1.72e-07,15;UBERON:0000463,1.72e-07,15;UBERON:0011135,9.25e-07,5;UBERON:0002216,9.25e-07,5;UBERON:0011134,9.25e-07,5;UBERON:0002209,9.25e-07,5;UBERON:0002213,9.25e-07,5;UBERON:0005856,9.25e-07,5;UBERON:0005866,9.25e-07,5;UBERON:0005863,9.25e-07,5;UBERON:0007844,9.25e-07,5;UBERON:0011138,9.25e-07,5;UBERON:0001130,9.25e-07,5;UBERON:0001066,9.25e-07,5;UBERON:0001468,9.25e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.89515962028049,0.261185628199839,1.72013755551056,0,0,0.263766978228454,9.2824764720035,7.95353701746998,0,0,0,0,0.123121058076788,1.02000345622126,0.626909442956176,0,0,0.376627918784408,0,0,0.236132343941038,11.8009283054671,5.37361157336098,12.5401059886022,0,0,0,0,0,5.28480790802725,20.4978301156795,23.6642448014767,19.7479892351425,1.56740831967947,1.94336199611388,2.83333124397605,4.07115068582781,2.26725566213286,1.94067248950253,20.9186133215116,14.3908760807639,14.5561994320699,15.8230815777183,12.0395532068677,11.1146648047635,18.2715210790408,12.9096936716765,12.1883837934908,6.40023954444856,5.45812300115692,7.86532195557796,19.8954530041087,8.34415470397843,10.8687311385837,6.59702600373432,4.78712778291916,2.98357325372886,24.3775760448011,20.425868088881,17.4390229718761,13.5674279238641,7.30076085788282,7.60160956467908,15.7403870684676,15.4676607114777,17.4054313092486,5.0701268714866,5.95292039902122,5.03180749220102,3.14520167210186,4.35512989240368,2.89306056054744,9.12040779971995,8.15558376516269,6.02791707423292,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,4.48406850385229,2.37045676297569,1.96709770113833,2.35806457649499,2.2616164889946,15.5483440713331,4.56291173287027,5.20792586308207,7.79306913631645,7.01885878376594,5.00830042707223,3.32300841875432,3.5204502289452,3.71464827204458,4.42201781703586,23.0213066445147,25.4242016362981,20.2862160014537,1.18629250529648,0.802622484269139,1.04535523804977,15.5233799495666,4.59864592322305,6.18529401868734,3.28925599625354,5.73417745783374,3.90650072313851,5.70271226669025,6.47473012034423,6.65530378002976,6.24653632761729,6.62976305723247,9.03240796613151,3.22570789159572,1.60464117470104,1.59306844271079,0,0,0,2.53007406669196,0.50133791063589,1.01392563272577,0,0.486634870302636,1.03988298880475,1.99556457716308,1.14185221401064,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.398873881556595,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.302714855289863,1.15235184896,0,1.5608003841516,1.1409436430889,0.896692083310806,1.05691048779388,0.971237666208789,1.82586048712923,3.26646674007829,0.737005903870608,3.71972812232756,1.18800285728205,0,0,0.718618141816238,2.18836948140286,2.62748891731125,0.831192346452549,1.31693286264251,0.612975591598039,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.506328996723799,0.0974370051611986,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0,0,0.325808305310325,1.03993478527958,0,0.231860809950154,0.821860859650752,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.179117045405697,0,0,0.985326475791887,2.28925928434388,4.35389042635621,8.64719720501769,4.92345490362882,0,0,0,0,0.205654985406647,0,0,0.784917590417525,1.30788020649984,0.95339771567235,0.129271715757778,0,0,0.797814349754612,0,1.54324424557285,1.41849132023278,2.93064396917709,3.43147184779554,22.7901074264406,9.05564370458846,0.65147236858747,3.909311436168,1.58390374586686,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,1.59259437334337,2.4657158706046,2.32779252211864,16.4765161670485,5.12279976525011,2.80315847317372,4.87703537863044,0,0,0,0.167516265334349,0,0.749007023947182,0,0,6.01188309423785,6.5022167737758,2.98391526069709,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0.737476674166813,0,1.56640925970192,1.37257369524342,3.51505644408909,8.41285383192606,4.90946765895844,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.697262270759755,0,0,0,1.83703117063371,0.546273504020151,2.49136388422906,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.863663664408557,0,0.541892875087706,1.00337954770971,0.764628819135115,0,0.223874754722178,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.580024309752732,0.462145851343933,0.614014698904518,0.964856007391714,0.751941714077915,1.74020032697074,0.767039646744908,0.267096106940212,0,0,0,0.2023155617111,0.464845549297286,0,0,0,0.532306030317022,0,0,0,1.116475108079,1.2655176988749,0.38126038784765,2.55897791311334,0.855877976067841,0,0,0.719489830333259,1.37268514868027,1.29593642580255,0,0,0,1.46290121726877,0,0,2.04749867111979,0.282810863907425,0,1.10273068709225,0,0,0.578775534266688,2.62357900818653,0,0,0.281695602532241,2.43799298746888,3.7334635584986,0,1.06428319221179,3.16661452946496,0.329294892959902,1.51789269506286,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,3.04468565539302,2.29391162142713,4.5571774973933,0.952927101831156,2.87953591160336,6.48473311192717,5.40031437238115,2.37937552888281,0,0,0,0,0.28853842595289,0,0,0.997896857164083,0,0,0.324621940274555,0.842391534340376,0,0.313359791546046,0,0,0,0.201799707191048,1.70338495076131,1.03051603426729,0.307240764308458,0.223676107892416,0.166849141711909,1.758492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| ||
|short_description=p2@PTGER2 | |||
}} | }} |
Latest revision as of 06:28, 20 September 2015
Short description: | p2@PTGER2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTGER2_5end |
Coexpression cluster: | C2299_Mesenchymal_CD14_CD4_NK_granulocyte_Basophils_Anulus |
Association with transcript: | -58bp_to_NM_000956, uc001wzr.2_5end |
EntrezGene: | PTGER2 |
HGNC: | 9594 |
UniProt: | P43116 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.01e-46 | 98 |
blood island | 4.01e-46 | 98 |
hemolymphoid system | 1.52e-39 | 108 |
bone marrow | 2.02e-39 | 76 |
skeletal element | 2.39e-39 | 90 |
skeletal system | 2.03e-38 | 100 |
bone element | 1.55e-36 | 82 |
immune system | 1.16e-32 | 93 |
musculoskeletal system | 8.24e-28 | 167 |
connective tissue | 1.94e-16 | 371 |
lateral plate mesoderm | 2.07e-15 | 203 |
mesoderm | 7.41e-14 | 315 |
mesoderm-derived structure | 7.41e-14 | 315 |
presumptive mesoderm | 7.41e-14 | 315 |
blood | 1.72e-07 | 15 |
haemolymphatic fluid | 1.72e-07 | 15 |
organism substance | 1.72e-07 | 15 |
intervertebral cartilage | 9.25e-07 | 5 |
symphysis | 9.25e-07 | 5 |
nonsynovial joint | 9.25e-07 | 5 |
fibrous joint | 9.25e-07 | 5 |
cartilaginous joint | 9.25e-07 | 5 |
developing mesenchymal condensation | 9.25e-07 | 5 |
pre-cartilage condensation | 9.25e-07 | 5 |
cartilaginous condensation | 9.25e-07 | 5 |
cartilage element | 9.25e-07 | 5 |
post-cranial axial skeletal system | 9.25e-07 | 5 |
vertebral column | 9.25e-07 | 5 |
intervertebral disk | 9.25e-07 | 5 |
intervertebral joint | 9.25e-07 | 5 |