FFCP PHASE1:Hg19::chr2:40679560..40679574,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6546 | |EntrezGene=6546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11068 | |HGNC=11068 | ||
|TSSclassifier=strong | |||
|UniProt=P32418 | |UniProt=P32418 | ||
|association_with_transcript=-351bp_to_ENST00000406785,uc002rsa.2,uc010fan.1_5end | |association_with_transcript=-351bp_to_ENST00000406785,uc002rsa.2,uc010fan.1_5end | ||
|cluster_id=chr2:40679560..40679574,- | |||
|description=CAGE_peak_5_at_SLC8A1_5end | |description=CAGE_peak_5_at_SLC8A1_5end | ||
|id=chr2:40679560..40679574,- | |id=chr2:40679560..40679574,- | ||
|ontology_enrichment_celltype=CL:0002057!5.02e-26!42;CL:0002009!1.67e-23!65;CL:0000860!8.64e-23!45;CL:0002194!3.46e-22!63;CL:0000576!3.46e-22!63;CL:0000040!3.46e-22!63;CL:0000559!3.46e-22!63;CL:0000766!8.07e-21!76;CL:0000557!2.66e-19!71;CL:0000839!1.75e-17!70;CL:0000763!6.27e-09!112;CL:0000049!6.27e-09!112;CL:0002393!4.23e-08!9;CL:0002397!4.23e-08!9 | |ontology_enrichment_celltype=CL:0002057!5.02e-26!42;CL:0002009!1.67e-23!65;CL:0000860!8.64e-23!45;CL:0002194!3.46e-22!63;CL:0000576!3.46e-22!63;CL:0000040!3.46e-22!63;CL:0000559!3.46e-22!63;CL:0000766!8.07e-21!76;CL:0000557!2.66e-19!71;CL:0000839!1.75e-17!70;CL:0000763!6.27e-09!112;CL:0000049!6.27e-09!112;CL:0002393!4.23e-08!9;CL:0002397!4.23e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.64e-31;33!CL:0002057;8.64e-31;33!CL:0000576;1.97e-27;48!CL:0000473;2.41e-24;39!CL:0000234;2.41e-24;39!CL:0000766;3.69e-17;69!CL:0002393;2.19e-10;6!CL:0002397;2.19e-10;6!CL:0000763;3.69e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.42e-48,42;CL:0002057,8.42e-48,42;CL:0000473,1.13e-44,48;CL:0000234,1.13e-44,48;CL:0002009,3.66e-39,61;CL:0000766,1.18e-36,72;CL:0002194,1.61e-36,59;CL:0000576,1.61e-36,59;CL:0000040,1.61e-36,59;CL:0000559,1.61e-36,59;CL:0000557,2.12e-34,67;CL:0000839,3.10e-31,66;CL:0000763,4.99e-22,108;CL:0000049,4.99e-22,108;CL:0000738,3.83e-17,136;CL:0002087,3.46e-15,115;CL:0002393,3.50e-15,9;CL:0002397,3.50e-15,9;CL:0002031,2.32e-13,120;CL:0000134,4.21e-12,354;CL:0002320,1.96e-11,361;CL:0000037,3.77e-11,168;CL:0000988,1.85e-10,177;CL:0002032,3.17e-10,161;CL:0000837,3.17e-10,161;CL:0000219,5.17e-10,386;CL:0000048,1.22e-07,427;CL:0000723,3.03e-07,433;CL:0000034,3.57e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.32e-33;42!CL:0000049;6.59e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.64e-17!86;UBERON:0002371!3.56e-17!80;UBERON:0002390!8.08e-17!102;UBERON:0003061!8.08e-17!102;UBERON:0004765!5.02e-16!101;UBERON:0001434!5.02e-16!101;UBERON:0002780!9.60e-16!41;UBERON:0001890!9.60e-16!41;UBERON:0006240!9.60e-16!41;UBERON:0003080!5.61e-15!42;UBERON:0001049!2.97e-14!57;UBERON:0005068!2.97e-14!57;UBERON:0006241!2.97e-14!57;UBERON:0007135!2.97e-14!57;UBERON:0002193!8.03e-14!112;UBERON:0007023!1.22e-13!115;UBERON:0001017!1.69e-13!82;UBERON:0001869!3.98e-13!32;UBERON:0002020!4.41e-13!34;UBERON:0003528!4.41e-13!34;UBERON:0001893!4.41e-13!34;UBERON:0002791!1.02e-12!33;UBERON:0000955!1.11e-12!69;UBERON:0006238!1.11e-12!69;UBERON:0002616!2.74e-12!59;UBERON:0005743!2.78e-12!86;UBERON:0000956!1.47e-11!25;UBERON:0000203!1.47e-11!25;UBERON:0002619!3.40e-11!22;UBERON:0000467!6.41e-11!625;UBERON:0000062!6.53e-11!511;UBERON:0000073!7.26e-11!94;UBERON:0001016!7.26e-11!94;UBERON:0000480!9.23e-11!626;UBERON:0002204!2.00e-10!167;UBERON:0000468!2.22e-10!659;UBERON:0001950!2.73e-10!20;UBERON:0003056!1.03e-09!61;UBERON:0002405!2.05e-09!115;UBERON:0003075!3.91e-09!86;UBERON:0007284!3.91e-09!86;UBERON:0000479!5.20e-09!787;UBERON:0000153!5.28e-08!129;UBERON:0007811!5.28e-08!129;UBERON:0000033!6.23e-08!123;UBERON:0002346!6.44e-08!90 | |ontology_enrichment_uberon=UBERON:0001474!2.64e-17!86;UBERON:0002371!3.56e-17!80;UBERON:0002390!8.08e-17!102;UBERON:0003061!8.08e-17!102;UBERON:0004765!5.02e-16!101;UBERON:0001434!5.02e-16!101;UBERON:0002780!9.60e-16!41;UBERON:0001890!9.60e-16!41;UBERON:0006240!9.60e-16!41;UBERON:0003080!5.61e-15!42;UBERON:0001049!2.97e-14!57;UBERON:0005068!2.97e-14!57;UBERON:0006241!2.97e-14!57;UBERON:0007135!2.97e-14!57;UBERON:0002193!8.03e-14!112;UBERON:0007023!1.22e-13!115;UBERON:0001017!1.69e-13!82;UBERON:0001869!3.98e-13!32;UBERON:0002020!4.41e-13!34;UBERON:0003528!4.41e-13!34;UBERON:0001893!4.41e-13!34;UBERON:0002791!1.02e-12!33;UBERON:0000955!1.11e-12!69;UBERON:0006238!1.11e-12!69;UBERON:0002616!2.74e-12!59;UBERON:0005743!2.78e-12!86;UBERON:0000956!1.47e-11!25;UBERON:0000203!1.47e-11!25;UBERON:0002619!3.40e-11!22;UBERON:0000467!6.41e-11!625;UBERON:0000062!6.53e-11!511;UBERON:0000073!7.26e-11!94;UBERON:0001016!7.26e-11!94;UBERON:0000480!9.23e-11!626;UBERON:0002204!2.00e-10!167;UBERON:0000468!2.22e-10!659;UBERON:0001950!2.73e-10!20;UBERON:0003056!1.03e-09!61;UBERON:0002405!2.05e-09!115;UBERON:0003075!3.91e-09!86;UBERON:0007284!3.91e-09!86;UBERON:0000479!5.20e-09!787;UBERON:0000153!5.28e-08!129;UBERON:0007811!5.28e-08!129;UBERON:0000033!6.23e-08!123;UBERON:0002346!6.44e-08!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.27e-09;22!UBERON:0002791;5.06e-09;32!UBERON:0000956;5.25e-09;25!UBERON:0000203;5.25e-09;25!UBERON:0001869;5.45e-09;32!UBERON:0001950;6.42e-09;20!UBERON:0003528;2.57e-08;34!UBERON:0002020;2.57e-08;34!UBERON:0001893;4.16e-08;34!UBERON:0002780;1.63e-07;41!UBERON:0001890;1.63e-07;41!UBERON:0003688;6.67e-07;6!UBERON:0002358;6.67e-07;6!UBERON:0003684;6.67e-07;6!UBERON:0001178;6.67e-07;6 | |||
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| ||
|short_description=p5@SLC8A1 | |short_description=p5@SLC8A1 | ||
}} | }} |
Latest revision as of 05:59, 17 September 2015
Short description: | p5@SLC8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC8A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -351bp_to_ENST00000406785, uc002rsa.2, uc010fan.1_5end |
EntrezGene: | SLC8A1 |
HGNC: | 11068 |
UniProt: | P32418 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.42e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.42e-48 | 42 |
defensive cell | 1.13e-44 | 48 |
phagocyte | 1.13e-44 | 48 |
macrophage dendritic cell progenitor | 3.66e-39 | 61 |
myeloid leukocyte | 1.18e-36 | 72 |
monopoietic cell | 1.61e-36 | 59 |
monocyte | 1.61e-36 | 59 |
monoblast | 1.61e-36 | 59 |
promonocyte | 1.61e-36 | 59 |
granulocyte monocyte progenitor cell | 2.12e-34 | 67 |
myeloid lineage restricted progenitor cell | 3.10e-31 | 66 |
myeloid cell | 4.99e-22 | 108 |
common myeloid progenitor | 4.99e-22 | 108 |
leukocyte | 3.83e-17 | 136 |
nongranular leukocyte | 3.46e-15 | 115 |
intermediate monocyte | 3.50e-15 | 9 |
CD14-positive, CD16-positive monocyte | 3.50e-15 | 9 |
hematopoietic lineage restricted progenitor cell | 2.32e-13 | 120 |
mesenchymal cell | 4.21e-12 | 354 |
connective tissue cell | 1.96e-11 | 361 |
hematopoietic stem cell | 3.77e-11 | 168 |
hematopoietic cell | 1.85e-10 | 177 |
hematopoietic oligopotent progenitor cell | 3.17e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.17e-10 | 161 |
motile cell | 5.17e-10 | 386 |
multi fate stem cell | 1.22e-07 | 427 |
somatic stem cell | 3.03e-07 | 433 |
stem cell | 3.57e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.63e-30 | 76 |
bone element | 1.10e-29 | 82 |
hematopoietic system | 2.82e-29 | 98 |
blood island | 2.82e-29 | 98 |
skeletal element | 9.39e-26 | 90 |
hemolymphoid system | 4.32e-25 | 108 |
immune system | 1.26e-24 | 93 |
skeletal system | 6.29e-23 | 100 |
lateral plate mesoderm | 1.73e-11 | 203 |
connective tissue | 4.82e-11 | 371 |
musculoskeletal system | 7.65e-11 | 167 |
regional part of forebrain | 3.03e-10 | 41 |
forebrain | 3.03e-10 | 41 |
anterior neural tube | 3.03e-10 | 41 |
future forebrain | 3.03e-10 | 41 |
regional part of telencephalon | 3.53e-10 | 32 |
cerebral hemisphere | 3.53e-10 | 32 |
regional part of cerebral cortex | 1.26e-09 | 22 |
cerebral cortex | 2.27e-09 | 25 |
pallium | 2.27e-09 | 25 |
brain grey matter | 2.51e-09 | 34 |
gray matter | 2.51e-09 | 34 |
telencephalon | 2.51e-09 | 34 |
neocortex | 2.62e-09 | 20 |
regional part of nervous system | 1.35e-07 | 53 |
regional part of brain | 1.35e-07 | 53 |
neural tube | 6.46e-07 | 56 |
neural rod | 6.46e-07 | 56 |
future spinal cord | 6.46e-07 | 56 |
neural keel | 6.46e-07 | 56 |
omentum | 8.82e-07 | 6 |
peritoneum | 8.82e-07 | 6 |
abdominal cavity | 8.82e-07 | 6 |
visceral peritoneum | 8.82e-07 | 6 |