FFCP PHASE1:Hg19::chrX:38525379..38525391,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7102 | |EntrezGene=7102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11854 | |HGNC=11854 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000419600,uc004deh.2_5end | |association_with_transcript=29bp_to_ENST00000419600,uc004deh.2_5end | ||
|cluster_id=chrX:38525379..38525391,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_7_at_TSPAN7_5end | |description=CAGE_peak_7_at_TSPAN7_5end | ||
|id=chrX:38525379..38525391,+ | |id=chrX:38525379..38525391,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.63e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.63e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.84e-11;82!UBERON:0006215;4.94e-10;3!UBERON:0006222;1.63e-08;1!UBERON:0005425;3.82e-08;1!UBERON:0004874;3.82e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.63e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.63e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.08e-65!115;UBERON:0005743!2.02e-53!86;UBERON:0001017!1.56e-52!82;UBERON:0001049!8.45e-52!57;UBERON:0005068!8.45e-52!57;UBERON:0006241!8.45e-52!57;UBERON:0007135!8.45e-52!57;UBERON:0000073!1.22e-50!94;UBERON:0001016!1.22e-50!94;UBERON:0000955!7.41e-44!69;UBERON:0006238!7.41e-44!69;UBERON:0002616!2.68e-42!59;UBERON:0002780!3.50e-42!41;UBERON:0001890!3.50e-42!41;UBERON:0006240!3.50e-42!41;UBERON:0003080!6.33e-41!42;UBERON:0003075!7.65e-40!86;UBERON:0007284!7.65e-40!86;UBERON:0002346!2.33e-37!90;UBERON:0001893!1.19e-34!34;UBERON:0002020!1.44e-34!34;UBERON:0003528!1.44e-34!34;UBERON:0002791!4.41e-33!33;UBERON:0001869!4.13e-32!32;UBERON:0002619!1.98e-28!22;UBERON:0003056!2.84e-28!61;UBERON:0000153!1.07e-26!129;UBERON:0007811!1.07e-26!129;UBERON:0004121!1.13e-25!169;UBERON:0001950!2.84e-25!20;UBERON:0000924!1.18e-24!173;UBERON:0006601!1.18e-24!173;UBERON:0000956!2.27e-24!25;UBERON:0000203!2.27e-24!25;UBERON:0000033!3.29e-24!123;UBERON:0000025!1.70e-19!194;UBERON:0004111!7.23e-16!241;UBERON:0000477!2.21e-13!286;UBERON:0000483!3.18e-13!309;UBERON:0000119!6.65e-13!312;UBERON:0002420!5.82e-12!9;UBERON:0007245!5.82e-12!9;UBERON:0010009!5.82e-12!9;UBERON:0010011!5.82e-12!9;UBERON:0000454!5.82e-12!9;UBERON:0003076!9.30e-12!15;UBERON:0003057!9.30e-12!15;UBERON:0000200!1.07e-11!6;UBERON:0002308!1.20e-11!9;UBERON:0000125!1.20e-11!9;UBERON:0001871!5.64e-11!7;UBERON:0000475!6.70e-10!365;UBERON:0004732!2.38e-09!13;UBERON:0000349!2.62e-09!5;UBERON:0000064!2.97e-09!219;UBERON:0009663!6.13e-09!7;UBERON:0001894!7.81e-09!7;UBERON:0006222!7.81e-09!7;UBERON:0000369!4.17e-08!4;UBERON:0002435!4.17e-08!4;UBERON:0000204!4.17e-08!4;UBERON:0010082!4.17e-08!4;UBERON:0004733!5.92e-08!12;UBERON:0002028!5.92e-08!12;UBERON:0007277!5.92e-08!12;UBERON:0000062!1.06e-07!511;UBERON:0000481!3.37e-07!347;UBERON:0000922!4.17e-07!612;UBERON:0002298!7.25e-07!8;UBERON:0005383!9.71e-07!3;UBERON:0005382!9.71e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.40e-30;32!UBERON:0001893;4.26e-29;34!UBERON:0000200;1.42e-28;6!UBERON:0002619;2.36e-28;22!UBERON:0001950;2.54e-25;20!UBERON:0002791;3.69e-25;32!UBERON:0000956;6.82e-25;25!UBERON:0000203;6.82e-25;25!UBERON:0003528;2.22e-24;34!UBERON:0002020;2.22e-24;34!UBERON:0001870;5.39e-21;3!UBERON:0001017;5.53e-20;75!UBERON:0002780;2.77e-19;41!UBERON:0001890;2.77e-19;41!UBERON:0000955;1.47e-18;68!UBERON:0002702;1.36e-14;2!UBERON:0000073;3.48e-14;53!UBERON:0002616;3.48e-14;53!UBERON:0001016;3.40e-12;83!UBERON:0005383;2.25e-10;3!UBERON:0005382;2.25e-10;3!UBERON:0001874;1.13e-08;1!UBERON:0003112;1.13e-08;1!UBERON:0011158;1.13e-08;1!UBERON:0003128;1.13e-08;1!UBERON:0001703;1.13e-08;1!UBERON:0002241;1.13e-08;1!UBERON:0007023;3.68e-08;114!UBERON:0002581;3.82e-08;1!UBERON:0002902;3.82e-08;1!UBERON:0000989;3.82e-08;1!UBERON:0000941;3.82e-08;1!UBERON:0001785;3.82e-08;1!UBERON:0002464;3.82e-08;1!UBERON:0004904;3.82e-08;1!UBERON:0008811;3.82e-08;1!UBERON:0001021;3.82e-08;1!UBERON:0009899;3.82e-08;1!UBERON:0007190;3.82e-08;1!UBERON:0000369;5.44e-08;4!UBERON:0002435;5.44e-08;4!UBERON:0000204;5.44e-08;4!UBERON:0011216;5.20e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.64e-36,81;UBERON:0001016,1.81e-35,89;UBERON:0001869,7.99e-33,32;UBERON:0000955,4.60e-32,68;UBERON:0006238,4.60e-32,68;UBERON:0001049,1.60e-31,56;UBERON:0005068,1.60e-31,56;UBERON:0006241,1.60e-31,56;UBERON:0007135,1.60e-31,56;UBERON:0001893,8.24e-31,34;UBERON:0002780,1.49e-29,41;UBERON:0001890,1.49e-29,41;UBERON:0003080,1.49e-29,41;UBERON:0006240,1.49e-29,41;UBERON:0000073,1.59e-29,53;UBERON:0002616,1.59e-29,53;UBERON:0000200,1.14e-28,6;UBERON:0002619,2.52e-28,22;UBERON:0002791,5.38e-28,32;UBERON:0003528,2.85e-26,34;UBERON:0002020,2.85e-26,34;UBERON:0001950,2.56e-25,20;UBERON:0000956,7.23e-25,25;UBERON:0000203,7.23e-25,25;UBERON:0003075,2.60e-23,82;UBERON:0007284,2.60e-23,82;UBERON:0007023,6.89e-23,114;UBERON:0003056,3.88e-22,61;UBERON:0002346,4.44e-22,86;UBERON:0001870,7.13e-21,3;UBERON:0010371,1.08e-17,104;UBERON:0004121,9.56e-17,171;UBERON:0000924,9.56e-17,171;UBERON:0006601,9.56e-17,171;UBERON:0010314,5.12e-15,132;UBERON:0002702,1.11e-14,2;UBERON:0011216,1.32e-14,223;UBERON:0005383,2.05e-10,3;UBERON:0005382,2.05e-10,3;UBERON:0001874,1.13e-08,1;UBERON:0003112,1.22e-08,1;UBERON:0011158,1.22e-08,1;UBERON:0003128,1.22e-08,1;UBERON:0001703,1.22e-08,1;UBERON:0002241,1.22e-08,1;UBERON:0004761,1.22e-08,1;UBERON:0009617,1.22e-08,1;UBERON:0002581,2.33e-08,1;UBERON:0000989,3.10e-08,1;UBERON:0008811,3.10e-08,1;UBERON:0006258,3.10e-08,1;UBERON:0005876,3.10e-08,1;UBERON:0004874,3.10e-08,1;UBERON:0000941,3.57e-08,1;UBERON:0001785,3.57e-08,1;UBERON:0002464,3.57e-08,1;UBERON:0004904,3.57e-08,1;UBERON:0001021,3.57e-08,1;UBERON:0003902,3.57e-08,1;UBERON:0005425,3.57e-08,1;UBERON:0002902,4.11e-08,1;UBERON:0009899,4.11e-08,1;UBERON:0000025,4.81e-08,192;UBERON:0000369,5.08e-08,4;UBERON:0002435,5.08e-08,4;UBERON:0000204,5.08e-08,4;UBERON:0010082,5.08e-08,4;UBERON:0007190,6.68e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,2.69027484669369,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,0.885741385813839,1.4471572635049,1.52581736317083,1.21637185924347,0.295547618953547,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0,0,0.649165919226273,0,0,0,0,0,0,0.269604531922708,0.802577647298789,2.81117334870407,0,0,0,0.789168805698781,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,2.25980740780532,0,0,1.2029051231617,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0.0824158583811665,0.13480708770837,0,0,0.795229689809303,1.36203406111576,0.160753148465019,0,0.83088067605837,0,0,0.91124334987037,0,0.236417121897595,0,0,1.6135860539956,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.79339561045614,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,1.77213635993397,3.90484047686282,1.251909307065,0,0.332787154610557,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,2.45772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0.385375350578757,1.41696576325585,0.638535436228605,0,0.504143392443436,1.38314504928436,3.39098855826887,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,3.12431239445539,0.826747186004736,0.634158101939068,0,0,1.48863353516788,0,0,0.535701835878287,0.672567444437648,0.606965604236632,0,0.0887023701626388,0,0,0.271878931907327,1.64431933907123,0,0,0.156986185701028,3.45654297815204,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,2.03974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.870866991587845,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,2.69027484669369,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.347249989866585,0.885741385813839,1.4471572635049,1.52581736317083,1.21637185924347,0.295547618953547,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0,0,0.649165919226273,0,0,0,0,0,0,0.269604531922708,0.802577647298789,2.81117334870407,0,0,0,0.789168805698781,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,2.25980740780532,0,0,1.2029051231617,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0.0824158583811665,0.13480708770837,0,0,0.795229689809303,1.36203406111576,0.160753148465019,0,0.83088067605837,0,0,0.91124334987037,0,0.236417121897595,0,0,1.6135860539956,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.79339561045614,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,1.77213635993397,3.90484047686282,1.251909307065,0,0.332787154610557,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,2.45772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0.385375350578757,1.41696576325585,0.638535436228605,0,0.504143392443436,1.38314504928436,3.39098855826887,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,3.12431239445539,0.826747186004736,0.634158101939068,0,0,1.48863353516788,0,0,0.535701835878287,0.672567444437648,0.606965604236632,0,0.0887023701626388,0,0,0.271878931907327,1.64431933907123,0,0,0.156986185701028,3.45654297815204,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,2.03974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.870866991587845,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | ||
|short_description=p7@TSPAN7 | |short_description=p7@TSPAN7 | ||
}} | }} |
Latest revision as of 00:10, 25 September 2015
Short description: | p7@TSPAN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TSPAN7_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 29bp_to_ENST00000419600, uc004deh.2_5end |
EntrezGene: | TSPAN7 |
HGNC: | 11854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.63e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.63e-08 | 1 |