FFCP PHASE1:Hg19::chr5:39219705..39219721,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2533 | |EntrezGene=2533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4036 | |HGNC=4036 | ||
|TSSclassifier=strong | |||
|UniProt=O15117 | |UniProt=O15117 | ||
|association_with_transcript=0bp_to_ENST00000351578_5end | |association_with_transcript=0bp_to_ENST00000351578_5end | ||
|cluster_id=chr5:39219705..39219721,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_FYB_5end | |description=CAGE_peak_5_at_FYB_5end | ||
|id=chr5:39219705..39219721,- | |id=chr5:39219705..39219721,- | ||
|ontology_enrichment_celltype=CL:0000766!7.83e-42!76;CL:0002009!6.09e-40!65;CL:0002194!2.97e-39!63;CL:0000576!2.97e-39!63;CL:0000040!2.97e-39!63;CL:0000559!2.97e-39!63;CL:0002057!5.11e-38!42;CL:0000763!9.52e-38!112;CL:0000049!9.52e-38!112;CL:0000557!2.00e-34!71;CL:0000860!3.94e-34!45;CL:0000839!6.49e-34!70;CL:0000037!7.82e-24!172;CL:0000566!7.82e-24!172;CL:0000738!2.53e-22!140;CL:0002032!3.51e-22!165;CL:0000837!3.51e-22!165;CL:0000988!1.14e-20!182;CL:0002087!2.84e-19!119;CL:0002031!8.76e-17!124;CL:0000094!8.81e-09!8;CL:0002393!2.26e-08!9;CL:0002397!2.26e-08!9 | |ontology_enrichment_celltype=CL:0000766!7.83e-42!76;CL:0002009!6.09e-40!65;CL:0002194!2.97e-39!63;CL:0000576!2.97e-39!63;CL:0000040!2.97e-39!63;CL:0000559!2.97e-39!63;CL:0002057!5.11e-38!42;CL:0000763!9.52e-38!112;CL:0000049!9.52e-38!112;CL:0000557!2.00e-34!71;CL:0000860!3.94e-34!45;CL:0000839!6.49e-34!70;CL:0000037!7.82e-24!172;CL:0000566!7.82e-24!172;CL:0000738!2.53e-22!140;CL:0002032!3.51e-22!165;CL:0000837!3.51e-22!165;CL:0000988!1.14e-20!182;CL:0002087!2.84e-19!119;CL:0002031!8.76e-17!124;CL:0000094!8.81e-09!8;CL:0002393!2.26e-08!9;CL:0002397!2.26e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-46;33!CL:0002057;2.32e-46;33!CL:0000576;2.03e-44;48!CL:0000473;1.28e-43;39!CL:0000234;1.28e-43;39!CL:0000766;3.43e-33;69!CL:0000763;9.22e-19;100!CL:0000094;9.64e-14;8!CL:0002087;3.74e-10;104!CL:0002393;1.41e-09;6!CL:0002397;1.41e-09;6!CL:0000081;1.87e-09;11!CL:0000738;2.88e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.50e-77,72;CL:0002194,8.22e-72,59;CL:0000576,8.22e-72,59;CL:0000040,8.22e-72,59;CL:0000559,8.22e-72,59;CL:0002009,7.15e-69,61;CL:0000473,4.38e-68,48;CL:0000234,4.38e-68,48;CL:0000860,5.49e-63,42;CL:0002057,5.49e-63,42;CL:0000839,2.67e-62,66;CL:0000557,4.21e-61,67;CL:0000763,1.41e-58,108;CL:0000049,1.41e-58,108;CL:0000738,9.12e-37,136;CL:0000037,1.85e-34,168;CL:0002087,1.55e-33,115;CL:0002032,4.23e-33,161;CL:0000837,4.23e-33,161;CL:0000988,1.48e-31,177;CL:0002031,2.04e-27,120;CL:0000094,1.12e-13,8;CL:0002393,5.39e-13,9;CL:0002397,5.39e-13,9;CL:0000081,2.07e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.47e-45;42!CL:0000049;4.49e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.62e-37!102;UBERON:0003061!5.62e-37!102;UBERON:0002193!3.25e-33!112;UBERON:0007023!1.17e-29!115;UBERON:0002371!9.28e-29!80;UBERON:0001474!7.42e-26!86;UBERON:0004765!5.37e-22!101;UBERON:0001434!5.37e-22!101;UBERON:0002405!2.00e-19!115;UBERON:0001049!1.14e-10!57;UBERON:0005068!1.14e-10!57;UBERON:0006241!1.14e-10!57;UBERON:0007135!1.14e-10!57;UBERON:0003081!1.38e-09!216;UBERON:0002780!5.99e-09!41;UBERON:0001890!5.99e-09!41;UBERON:0006240!5.99e-09!41;UBERON:0000178!1.40e-08!15;UBERON:0000179!1.40e-08!15;UBERON:0000463!1.40e-08!15;UBERON:0003080!1.56e-08!42;UBERON:0002020!7.59e-08!34;UBERON:0003528!7.59e-08!34;UBERON:0002616!1.09e-07!59;UBERON:0001893!1.11e-07!34;UBERON:0000062!1.98e-07!511;UBERON:0002791!2.27e-07!33;UBERON:0002204!7.91e-07!167;UBERON:0001869!9.70e-07!32 | |ontology_enrichment_uberon=UBERON:0002390!5.62e-37!102;UBERON:0003061!5.62e-37!102;UBERON:0002193!3.25e-33!112;UBERON:0007023!1.17e-29!115;UBERON:0002371!9.28e-29!80;UBERON:0001474!7.42e-26!86;UBERON:0004765!5.37e-22!101;UBERON:0001434!5.37e-22!101;UBERON:0002405!2.00e-19!115;UBERON:0001049!1.14e-10!57;UBERON:0005068!1.14e-10!57;UBERON:0006241!1.14e-10!57;UBERON:0007135!1.14e-10!57;UBERON:0003081!1.38e-09!216;UBERON:0002780!5.99e-09!41;UBERON:0001890!5.99e-09!41;UBERON:0006240!5.99e-09!41;UBERON:0000178!1.40e-08!15;UBERON:0000179!1.40e-08!15;UBERON:0000463!1.40e-08!15;UBERON:0003080!1.56e-08!42;UBERON:0002020!7.59e-08!34;UBERON:0003528!7.59e-08!34;UBERON:0002616!1.09e-07!59;UBERON:0001893!1.11e-07!34;UBERON:0000062!1.98e-07!511;UBERON:0002791!2.27e-07!33;UBERON:0002204!7.91e-07!167;UBERON:0001869!9.70e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.87e-14;15!UBERON:0000179;1.87e-14;15!UBERON:0000463;1.87e-14;15!UBERON:0002390;7.14e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.26e-64,98;UBERON:0003061,4.26e-64,98;UBERON:0002193,1.12e-59,108;UBERON:0002371,9.68e-52,76;UBERON:0001474,1.21e-46,82;UBERON:0002405,7.52e-46,93;UBERON:0004765,6.54e-41,90;UBERON:0001434,4.74e-35,100;UBERON:0003081,9.81e-21,203;UBERON:0000178,2.01e-14,15;UBERON:0000179,2.01e-14,15;UBERON:0000463,2.01e-14,15;UBERON:0002204,2.54e-14,167;UBERON:0000926,4.39e-08,315;UBERON:0004120,4.39e-08,315;UBERON:0006603,4.39e-08,315;UBERON:0007023,2.46e-07,114;UBERON:0000125,8.43e-07,9;UBERON:0002308,8.43e-07,9 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11373559903575,4.60595277716655,4.18003532953405,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,4.9859586767869,8.42286679374595,5.20826089718044,7.83704159839735,6.47787332037959,8.75756929956234,21.6643375781551,13.2256580291083,19.4067248950253,9.99444858694444,6.98985409637104,4.64559556342655,29.9200088015036,21.5174993484445,27.9049031268531,12.0660988257816,9.68227025375739,8.12558919566051,12.0475097307267,5.45812300115692,6.51698104890745,8.57034898638527,9.30694178520671,8.31138263538754,52.4463567296879,44.4803956496239,46.032273057531,8.70627715885752,5.6738522469114,4.9825779919646,23.1148772036204,14.0800387973454,23.4563952281526,7.87019353423379,4.78760926783834,7.27863491114034,5.49263744411049,5.10250319916104,7.75736988380991,11.569849008089,13.5159203557356,23.3052100710766,3.70516566863623,3.18266683518544,3.28795476776341,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0.451725357233318,0.639933055772092,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.523916301990851,0,0,0.97364218096405,1.39303789839414,1.86141144726411,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.9451043590158,50.4114343392823,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,5.90920814609754,9.82817913584798,6.8370334652815,0,0.16798212819886,0.283550194484773,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,3.51579964002488,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,0,0,0,77.896730490507,32.9077605124427,99.4597232246485,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,4.9624326269493,4.52999821719095,4.26910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.288666338176536,0,0,1.31801321087491,0,0,0,0,15.2234282769651,14.5281069357051,15.3804740537024,9.05280746739598,9.87269455406866,21.3996192693597,14.5808488054291,9.51750211553125,0,0,4.6557641036396,0,0,0,0,0,0.191505370132367,0.211673582723883,0.649243880549111,0.280797178113459,1.36940807419915,2.50687833236837,5.01268954180134,1.52362600021443,0,0,3.83261613921294,1.37402137902306,3.07240764308458,2.68411329470899,3.50383197595008,1.75849285861836,0,0,1.08182271390393,0,0,0,1.02555725490326,0,0,0,0.47748896947538,0.296964680832639,0,0.994147647766298,0.703347082052564,0.111308705022906,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.295930216910801,11.974154617347,0,0,0.74214478529481,0,0,0,0,0.1137934482855,0,0,0,0,0,3.54296554325536,0.482385754501632,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.230850775511391,0,39.1958637459702,10.0528561738945,1.08647371922008,0.957003479195758,1.4655614944298,1.06606955203727,0,0,0.332423363800313,0.225595660617181,0,0,0,0.476809736941136,0,0,0,0.216388639742091,0,0.353830258013357,0,0,0,0,1.41542379259422,0,0,0,0.19566461893209,0,0.394584402849391,0,0,2.02197054811161,0,0,0,0,0.313932918407225,0,0,0,0,4.40965788364699,0.69647365264322,2.27144668714639,0,0,0,0,0.678923115418936,0.176512253383001,0.225980740780532,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,3.69644523008381,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,2.38568906942791,0.681017030557878,0,0,0,0.2249738915515,0.77380195455795,0.364497339948148,3.01891218839339,0.472834243795189,0.209818352539992,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0.58620893471233,1.32506888912221,1.93924434542326,1.3223260174269,0,0,2.56289790162467,1.41483874589699,1.65695622138878,2.48083010905975,0,0,5.10673006216145,0,0.5013797880454,0.306345576763462,0.655745261419609,0,1.77213635993397,0.244052529803926,1.3771002377715,0,1.44207766997908,2.11127770000704,0,0,0,0.856396000634902,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0.163565394255844,0,0.737318726261158,0,0,1.06691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,1.75597244962866,0,0,0.207471757392654,0.322951291263702,0,3.33702242903487,0.471878893390961,1.46742878817343,0.115525666150338,0,0,0,0.526472298444801,0,0,21.7382556419581,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| ||
|short_description=p5@FYB | |short_description=p5@FYB | ||
}} | }} |
Latest revision as of 20:58, 17 September 2015
Short description: | p5@FYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FYB_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000351578_5end |
EntrezGene: | FYB |
HGNC: | 4036 |
UniProt: | O15117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.50e-77 | 72 |
monopoietic cell | 8.22e-72 | 59 |
monocyte | 8.22e-72 | 59 |
monoblast | 8.22e-72 | 59 |
promonocyte | 8.22e-72 | 59 |
macrophage dendritic cell progenitor | 7.15e-69 | 61 |
defensive cell | 4.38e-68 | 48 |
phagocyte | 4.38e-68 | 48 |
classical monocyte | 5.49e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.49e-63 | 42 |
myeloid lineage restricted progenitor cell | 2.67e-62 | 66 |
granulocyte monocyte progenitor cell | 4.21e-61 | 67 |
myeloid cell | 1.41e-58 | 108 |
common myeloid progenitor | 1.41e-58 | 108 |
leukocyte | 9.12e-37 | 136 |
hematopoietic stem cell | 1.85e-34 | 168 |
nongranular leukocyte | 1.55e-33 | 115 |
hematopoietic oligopotent progenitor cell | 4.23e-33 | 161 |
hematopoietic multipotent progenitor cell | 4.23e-33 | 161 |
hematopoietic cell | 1.48e-31 | 177 |
hematopoietic lineage restricted progenitor cell | 2.04e-27 | 120 |
granulocyte | 1.12e-13 | 8 |
intermediate monocyte | 5.39e-13 | 9 |
CD14-positive, CD16-positive monocyte | 5.39e-13 | 9 |
blood cell | 2.07e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.26e-64 | 98 |
blood island | 4.26e-64 | 98 |
hemolymphoid system | 1.12e-59 | 108 |
bone marrow | 9.68e-52 | 76 |
bone element | 1.21e-46 | 82 |
immune system | 7.52e-46 | 93 |
skeletal element | 6.54e-41 | 90 |
skeletal system | 4.74e-35 | 100 |
lateral plate mesoderm | 9.81e-21 | 203 |
blood | 2.01e-14 | 15 |
haemolymphatic fluid | 2.01e-14 | 15 |
organism substance | 2.01e-14 | 15 |
musculoskeletal system | 2.54e-14 | 167 |
mesoderm | 4.39e-08 | 315 |
mesoderm-derived structure | 4.39e-08 | 315 |
presumptive mesoderm | 4.39e-08 | 315 |
adult organism | 2.46e-07 | 114 |
neural nucleus | 8.43e-07 | 9 |
nucleus of brain | 8.43e-07 | 9 |