FFCP PHASE1:Hg19::chr12:6484569..6484580,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000538979_5end | |association_with_transcript=19bp_to_ENST00000538979_5end | ||
|cluster_id=chr12:6484569..6484580,- | |||
|description=CAGE_peak_9_at_SCNN1A_5end | |description=CAGE_peak_9_at_SCNN1A_5end | ||
|id=chr12:6484569..6484580,- | |id=chr12:6484569..6484580,- | ||
|ontology_enrichment_celltype=CL:0000066!6.81e-11!254;CL:0002076!1.69e-10!43;CL:0000223!1.93e-08!59;CL:0002322!1.60e-07!5;CL:0002251!2.68e-07!21 | |ontology_enrichment_celltype=CL:0000066!6.81e-11!254;CL:0002076!1.69e-10!43;CL:0000223!1.93e-08!59;CL:0002322!1.60e-07!5;CL:0002251!2.68e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.93e-11;7!CL:0000586;6.93e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.52e-11,7;CL:0000586,6.52e-11,7;CL:0000239,8.07e-07,3;CL:1000615,8.07e-07,3;CL:0002306,8.07e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.21e-10;2!UBERON:0008947;1.17e-08;29!UBERON:0009117;1.25e-07;10!UBERON:0005564;1.25e-07;10 | |||
|ontology_enrichment_disease=DOID:305!1.50e-10!106 | |ontology_enrichment_disease=DOID:305!1.50e-10!106 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.79e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.33e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.87e-15!169;UBERON:0000925!3.87e-15!169;UBERON:0006595!3.87e-15!169;UBERON:0004921!3.75e-14!129;UBERON:0004185!3.75e-14!129;UBERON:0000464!4.13e-14!104;UBERON:0001007!4.20e-13!155;UBERON:0001555!4.20e-13!155;UBERON:0007026!4.20e-13!155;UBERON:0001041!1.08e-12!98;UBERON:0000466!1.75e-12!126;UBERON:0000077!1.84e-12!130;UBERON:0001004!5.00e-12!72;UBERON:0003135!2.16e-11!11;UBERON:0001044!3.91e-10!6;UBERON:0003293!3.91e-10!6;UBERON:0003294!3.91e-10!6;UBERON:0010047!3.91e-10!6;UBERON:0000167!3.91e-10!6;UBERON:0000473!8.95e-10!8;UBERON:0000065!4.44e-09!53;UBERON:0003408!6.15e-09!10;UBERON:0003101!2.09e-08!22;UBERON:0000079!2.09e-08!22;UBERON:0002553!3.22e-08!70;UBERON:0007023!5.81e-08!115;UBERON:0005156!1.01e-07!59;UBERON:0000990!1.01e-07!59;UBERON:0003133!1.10e-07!48;UBERON:0005153!2.75e-07!37;UBERON:0000078!3.38e-07!18;UBERON:0005178!4.34e-07!34;UBERON:0002224!4.34e-07!34;UBERON:0000166!5.64e-07!21;UBERON:0005181!8.89e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!3.87e-15!169;UBERON:0000925!3.87e-15!169;UBERON:0006595!3.87e-15!169;UBERON:0004921!3.75e-14!129;UBERON:0004185!3.75e-14!129;UBERON:0000464!4.13e-14!104;UBERON:0001007!4.20e-13!155;UBERON:0001555!4.20e-13!155;UBERON:0007026!4.20e-13!155;UBERON:0001041!1.08e-12!98;UBERON:0000466!1.75e-12!126;UBERON:0000077!1.84e-12!130;UBERON:0001004!5.00e-12!72;UBERON:0003135!2.16e-11!11;UBERON:0001044!3.91e-10!6;UBERON:0003293!3.91e-10!6;UBERON:0003294!3.91e-10!6;UBERON:0010047!3.91e-10!6;UBERON:0000167!3.91e-10!6;UBERON:0000473!8.95e-10!8;UBERON:0000065!4.44e-09!53;UBERON:0003408!6.15e-09!10;UBERON:0003101!2.09e-08!22;UBERON:0000079!2.09e-08!22;UBERON:0002553!3.22e-08!70;UBERON:0007023!5.81e-08!115;UBERON:0005156!1.01e-07!59;UBERON:0000990!1.01e-07!59;UBERON:0003133!1.10e-07!48;UBERON:0005153!2.75e-07!37;UBERON:0000078!3.38e-07!18;UBERON:0005178!4.34e-07!34;UBERON:0002224!4.34e-07!34;UBERON:0000166!5.64e-07!21;UBERON:0005181!8.89e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;6.73e-20;11!UBERON:0001041;2.66e-15;14!UBERON:0006947;1.33e-14;3!UBERON:0004054;1.33e-14;3!UBERON:0000473;1.62e-14;8!UBERON:0001044;7.15e-13;6!UBERON:0003293;7.15e-13;6!UBERON:0003294;7.15e-13;6!UBERON:0010047;7.15e-13;6!UBERON:0003408;7.15e-13;6!UBERON:0000167;7.15e-13;6!UBERON:0003101;3.51e-12;22!UBERON:0000079;3.51e-12;22!UBERON:0005904;4.54e-11;4!UBERON:0001829;2.02e-10;2!UBERON:0003127;4.21e-10;2!UBERON:0005178;5.27e-08;34!UBERON:0002224;5.27e-08;34!UBERON:0005181;5.51e-07;35!UBERON:0002048;9.57e-07;22!UBERON:0000117;9.57e-07;22!UBERON:0000171;9.57e-07;22!UBERON:0000170;9.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,5.87e-20,11;UBERON:0006947,1.19e-14,3;UBERON:0004054,1.19e-14,3;UBERON:0000473,1.41e-14,8;UBERON:0001044,7.29e-13,6;UBERON:0003293,7.29e-13,6;UBERON:0003294,7.29e-13,6;UBERON:0010047,7.29e-13,6;UBERON:0000167,7.29e-13,6;UBERON:0003101,3.44e-12,22;UBERON:0000079,3.44e-12,22;UBERON:0005904,4.18e-11,4;UBERON:0001829,1.84e-10,2;UBERON:0003127,4.63e-10,2;UBERON:0001041,1.14e-09,87;UBERON:0005178,4.11e-09,34;UBERON:0002224,4.11e-09,34;UBERON:0001004,6.30e-09,74;UBERON:0005181,8.28e-09,35;UBERON:0005153,2.65e-08,37;UBERON:0005177,7.66e-08,101;UBERON:0003408,9.86e-08,10;UBERON:0007023,1.07e-07,114;UBERON:0005157,1.22e-07,47;UBERON:0004921,4.25e-07,118;UBERON:0002553,5.24e-07,61;UBERON:0006853,8.07e-07,3;UBERON:0007685,8.07e-07,3;UBERON:0004134,8.07e-07,3;UBERON:0002048,8.31e-07,22;UBERON:0000117,8.31e-07,22;UBERON:0000171,8.31e-07,22;UBERON:0000170,8.31e-07,22;UBERON:0005597,8.31e-07,22;UBERON:0000118,8.31e-07,22;UBERON:0009569,9.64e-07,112;UBERON:0000915,9.83e-07,52 | |||
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| ||
|short_description=p9@SCNN1A | |short_description=p9@SCNN1A | ||
}} | }} |
Latest revision as of 20:48, 19 September 2015
Short description: | p9@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SCNN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000538979_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.52e-11 | 7 |
germ cell | 6.52e-11 | 7 |
brush border epithelial cell | 8.07e-07 | 3 |
kidney cortex tubule cell | 8.07e-07 | 3 |
epithelial cell of proximal tubule | 8.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.33e-10 | 2 |