FFCP PHASE1:Hg19::chr9:137263790..137263815,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6256 | |EntrezGene=6256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10477 | |HGNC=10477 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000356384_5end | |association_with_transcript=-1bp_to_ENST00000356384_5end | ||
|cluster_id=chr9:137263790..137263815,+ | |||
|description=CAGE_peak_7_at_RXRA_5end | |description=CAGE_peak_7_at_RXRA_5end | ||
|id=chr9:137263790..137263815,+ | |id=chr9:137263790..137263815,+ | ||
|ontology_enrichment_celltype=CL:0002194!1.51e-31!63;CL:0000576!1.51e-31!63;CL:0000040!1.51e-31!63;CL:0000559!1.51e-31!63;CL:0000860!2.14e-31!45;CL:0002057!3.35e-30!42;CL:0002009!3.45e-30!65;CL:0000557!2.32e-28!71;CL:0000839!3.91e-27!70;CL:0000766!5.44e-27!76;CL:0000763!3.54e-17!112;CL:0000049!3.54e-17!112;CL:0002087!1.24e-12!119;CL:0002076!6.97e-12!43;CL:0000738!2.02e-10!140;CL:0002031!3.03e-10!124;CL:0002368!5.51e-09!13;CL:0000244!3.18e-08!4;CL:0000731!3.18e-08!4;CL:0000037!4.77e-08!172;CL:0000566!4.77e-08!172;CL:0002032!8.48e-08!165;CL:0000837!8.48e-08!165;CL:0002159!2.48e-07!13;CL:0000223!4.21e-07!59;CL:0000988!5.36e-07!182 | |ontology_enrichment_celltype=CL:0002194!1.51e-31!63;CL:0000576!1.51e-31!63;CL:0000040!1.51e-31!63;CL:0000559!1.51e-31!63;CL:0000860!2.14e-31!45;CL:0002057!3.35e-30!42;CL:0002009!3.45e-30!65;CL:0000557!2.32e-28!71;CL:0000839!3.91e-27!70;CL:0000766!5.44e-27!76;CL:0000763!3.54e-17!112;CL:0000049!3.54e-17!112;CL:0002087!1.24e-12!119;CL:0002076!6.97e-12!43;CL:0000738!2.02e-10!140;CL:0002031!3.03e-10!124;CL:0002368!5.51e-09!13;CL:0000244!3.18e-08!4;CL:0000731!3.18e-08!4;CL:0000037!4.77e-08!172;CL:0000566!4.77e-08!172;CL:0002032!8.48e-08!165;CL:0000837!8.48e-08!165;CL:0002159!2.48e-07!13;CL:0000223!4.21e-07!59;CL:0000988!5.36e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000244;3.94e-23;4!CL:0000731;3.94e-23;4!CL:0000473;4.14e-09;39!CL:0000234;4.14e-09;39!CL:0000860;2.34e-08;33!CL:0002057;2.34e-08;33!CL:0002621;2.69e-08;3!CL:0002252;3.07e-07;1!CL:0002251;6.57e-07;20!CL:0002032;7.77e-07;1!CL:0000557;7.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.34e-23,4;CL:0000731,4.34e-23,4;CL:0000473,1.13e-09,48;CL:0000234,1.13e-09,48;CL:0002621,4.20e-08,3;CL:0000557,9.97e-08,67;CL:0002194,2.14e-07,59;CL:0000576,2.14e-07,59;CL:0000040,2.14e-07,59;CL:0000559,2.14e-07,59;CL:0002076,2.61e-07,42;CL:0000860,2.82e-07,42;CL:0002057,2.82e-07,42;CL:0002252,3.57e-07,1;CL:0002009,4.20e-07,61;CL:0002251,7.60e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.88e-13!14 | |ontology_enrichment_disease=DOID:1749!3.88e-13!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.98e-14;14!DOID:3151;7.77e-07;1!DOID:3149;7.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.90e-14,14;DOID:3151,4.25e-07,1;DOID:3149,4.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.47e-26!102;UBERON:0003061!4.47e-26!102;UBERON:0002371!9.89e-24!80;UBERON:0002193!1.44e-23!112;UBERON:0001474!3.38e-21!86;UBERON:0004765!1.30e-19!101;UBERON:0001434!1.30e-19!101;UBERON:0002405!2.79e-17!115;UBERON:0002204!6.08e-09!167;UBERON:0003729!8.39e-09!5;UBERON:0000161!4.74e-08!35;UBERON:0003343!1.97e-07!4;UBERON:0004785!1.97e-07!4;UBERON:0000166!2.65e-07!21;UBERON:0003081!9.82e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!4.47e-26!102;UBERON:0003061!4.47e-26!102;UBERON:0002371!9.89e-24!80;UBERON:0002193!1.44e-23!112;UBERON:0001474!3.38e-21!86;UBERON:0004765!1.30e-19!101;UBERON:0001434!1.30e-19!101;UBERON:0002405!2.79e-17!115;UBERON:0002204!6.08e-09!167;UBERON:0003729!8.39e-09!5;UBERON:0000161!4.74e-08!35;UBERON:0003343!1.97e-07!4;UBERON:0004785!1.97e-07!4;UBERON:0000166!2.65e-07!21;UBERON:0003081!9.82e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.51e-18;5!UBERON:0000486;1.96e-16;12!UBERON:0005910;1.75e-15;6!UBERON:0001949;2.69e-08;3!UBERON:0003729;4.19e-07;13!UBERON:0001389;7.77e-07;1!UBERON:0000997;7.77e-07;1!UBERON:0000026;7.77e-07;1!UBERON:0008784;7.77e-07;1!UBERON:0006058;7.77e-07;1!UBERON:0005056;7.77e-07;1!UBERON:0003663;7.77e-07;1!UBERON:0004256;7.77e-07;1!UBERON:0004708;7.77e-07;1!UBERON:0002101;7.77e-07;1!UBERON:0004709;7.77e-07;1!UBERON:0002529;7.77e-07;1!UBERON:0010538;7.77e-07;1!UBERON:0003661;7.77e-07;1!UBERON:0010890;7.77e-07;1!UBERON:0002471;7.77e-07;1!UBERON:0001383;7.77e-07;1!UBERON:0004176;7.77e-07;1!UBERON:0010758;7.77e-07;1!UBERON:0010707;7.77e-07;1!UBERON:0000978;7.77e-07;1!UBERON:0002103;7.77e-07;1!UBERON:0001665;7.77e-07;1!UBERON:0003823;7.77e-07;1!UBERON:0000154;7.77e-07;1!UBERON:0010709;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.63e-18,5;UBERON:0005910,1.86e-15,6;UBERON:0001949,4.20e-08,3;UBERON:0003729,4.82e-07,13;UBERON:0005418,5.69e-07,1;UBERON:0001389,5.69e-07,1;UBERON:0000026,5.69e-07,1;UBERON:0008784,5.69e-07,1;UBERON:0006058,5.69e-07,1;UBERON:0003663,5.69e-07,1;UBERON:0004256,5.69e-07,1;UBERON:0004708,5.69e-07,1;UBERON:0002101,5.69e-07,1;UBERON:0004709,5.69e-07,1;UBERON:0002529,5.69e-07,1;UBERON:0010538,5.69e-07,1;UBERON:0003661,5.69e-07,1;UBERON:0010890,5.69e-07,1;UBERON:0002471,5.69e-07,1;UBERON:0001383,5.69e-07,1;UBERON:0004357,5.69e-07,1;UBERON:0004347,5.69e-07,1;UBERON:0005420,5.69e-07,1;UBERON:0005732,5.69e-07,1;UBERON:0010758,5.69e-07,1;UBERON:0010707,5.69e-07,1;UBERON:0000978,5.69e-07,1;UBERON:0002103,5.69e-07,1;UBERON:0001665,5.69e-07,1;UBERON:0003823,5.69e-07,1;UBERON:0000154,5.69e-07,1;UBERON:0010709,5.69e-07,1;UBERON:0005733,5.69e-07,1;UBERON:0005730,5.69e-07,1;UBERON:0000997,8.98e-07,1;UBERON:0005056,8.98e-07,1;UBERON:0003343,9.81e-07,4;UBERON:0004785,9.81e-07,4 | |||
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| ||
|short_description=p7@RXRA | |short_description=p7@RXRA | ||
}} | }} |
Latest revision as of 08:28, 16 September 2015
Short description: | p7@RXRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RXRA_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000356384_5end |
EntrezGene: | RXRA |
HGNC: | 10477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.34e-23 | 4 |
urothelial cell | 4.34e-23 | 4 |
defensive cell | 1.13e-09 | 48 |
phagocyte | 1.13e-09 | 48 |
gingival epithelial cell | 4.20e-08 | 3 |
granulocyte monocyte progenitor cell | 9.97e-08 | 67 |
monopoietic cell | 2.14e-07 | 59 |
monocyte | 2.14e-07 | 59 |
monoblast | 2.14e-07 | 59 |
promonocyte | 2.14e-07 | 59 |
endo-epithelial cell | 2.61e-07 | 42 |
classical monocyte | 2.82e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.82e-07 | 42 |
epithelial cell of esophagus | 3.57e-07 | 1 |
macrophage dendritic cell progenitor | 4.20e-07 | 61 |
epithelial cell of alimentary canal | 7.60e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.90e-14 | 14 |
skin squamous cell carcinoma | 4.25e-07 | 1 |
keratoacanthoma | 4.25e-07 | 1 |