FFCP PHASE1:Hg19::chr14:93121971..93122003,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:93121971..93122003,+ | |||
|coexpression_cluster_id=C1721 | |||
|description=CAGE_peak_at_chr14:93121971..93122003,+ | |description=CAGE_peak_at_chr14:93121971..93122003,+ | ||
|id=chr14:93121971..93122003,+ | |id=chr14:93121971..93122003,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.93e-72!76;CL:0002057!8.37e-69!42;CL:0000860!3.17e-63!45;CL:0000738!1.12e-62!140;CL:0000557!3.24e-61!71;CL:0000839!7.88e-60!70;CL:0002009!5.28e-54!65;CL:0002194!1.01e-53!63;CL:0000576!1.01e-53!63;CL:0000040!1.01e-53!63;CL:0000559!1.01e-53!63;CL:0002031!3.45e-52!124;CL:0000037!1.18e-49!172;CL:0000566!1.18e-49!172;CL:0002087!2.73e-49!119;CL:0000763!2.46e-48!112;CL:0000049!2.46e-48!112;CL:0002032!1.47e-47!165;CL:0000837!1.47e-47!165;CL:0000988!1.32e-45!182;CL:0002393!6.47e-16!9;CL:0002397!6.47e-16!9;CL:0000134!1.57e-12!358;CL:0002320!6.97e-12!365;CL:0000094!3.92e-11!8;CL:0002274!3.58e-10!5;CL:0000457!3.58e-10!5;CL:0002191!3.58e-10!5;CL:0000097!3.58e-10!5;CL:0000831!3.58e-10!5;CL:0002028!3.58e-10!5;CL:0000219!1.24e-09!390;CL:0000048!7.65e-08!430;CL:0000081!1.05e-07!11;CL:0000723!1.84e-07!436;CL:0000034!1.96e-07!444;CL:0000623!5.51e-07!3;CL:0000825!5.51e-07!3 | |ontology_enrichment_celltype=CL:0000766!1.93e-72!76;CL:0002057!8.37e-69!42;CL:0000860!3.17e-63!45;CL:0000738!1.12e-62!140;CL:0000557!3.24e-61!71;CL:0000839!7.88e-60!70;CL:0002009!5.28e-54!65;CL:0002194!1.01e-53!63;CL:0000576!1.01e-53!63;CL:0000040!1.01e-53!63;CL:0000559!1.01e-53!63;CL:0002031!3.45e-52!124;CL:0000037!1.18e-49!172;CL:0000566!1.18e-49!172;CL:0002087!2.73e-49!119;CL:0000763!2.46e-48!112;CL:0000049!2.46e-48!112;CL:0002032!1.47e-47!165;CL:0000837!1.47e-47!165;CL:0000988!1.32e-45!182;CL:0002393!6.47e-16!9;CL:0002397!6.47e-16!9;CL:0000134!1.57e-12!358;CL:0002320!6.97e-12!365;CL:0000094!3.92e-11!8;CL:0002274!3.58e-10!5;CL:0000457!3.58e-10!5;CL:0002191!3.58e-10!5;CL:0000097!3.58e-10!5;CL:0000831!3.58e-10!5;CL:0002028!3.58e-10!5;CL:0000219!1.24e-09!390;CL:0000048!7.65e-08!430;CL:0000081!1.05e-07!11;CL:0000723!1.84e-07!436;CL:0000034!1.96e-07!444;CL:0000623!5.51e-07!3;CL:0000825!5.51e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-78;33!CL:0002057;1.02e-78;33!CL:0000473;8.37e-62;39!CL:0000234;8.37e-62;39!CL:0000576;5.48e-60;48!CL:0000766;1.94e-58;69!CL:0000763;3.38e-22;100!CL:0002393;1.62e-19;6!CL:0002397;1.62e-19;6!CL:0000094;1.70e-19;8!CL:0002087;2.20e-17;104!CL:0000097;2.59e-17;5!CL:0000738;4.01e-17;136!CL:0000081;6.88e-14;11!CL:0000623;1.76e-11;3!CL:0000226;6.59e-11;3!CL:0000842;6.59e-11;3!CL:0000767;1.77e-10;3!CL:0000775;2.37e-10;3!CL:0000875;1.05e-09;3!CL:0002396;1.05e-09;3!CL:0000163;1.90e-09;9!CL:0000988;5.18e-09;177!CL:0000219;1.63e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.40e-119,72;CL:0000860,8.36e-114,42;CL:0002057,8.36e-114,42;CL:0000473,1.34e-108,48;CL:0000234,1.34e-108,48;CL:0000839,1.79e-96,66;CL:0000557,6.91e-95,67;CL:0002194,9.19e-85,59;CL:0000576,9.19e-85,59;CL:0000040,9.19e-85,59;CL:0000559,9.19e-85,59;CL:0002009,1.09e-81,61;CL:0000763,1.33e-75,108;CL:0000049,1.33e-75,108;CL:0000738,2.15e-74,136;CL:0000037,6.22e-58,168;CL:0002031,2.75e-56,120;CL:0000988,2.29e-54,177;CL:0002032,8.47e-54,161;CL:0000837,8.47e-54,161;CL:0002087,1.21e-53,115;CL:0002393,8.68e-28,9;CL:0002397,8.68e-28,9;CL:0000134,6.54e-21,354;CL:0002320,2.95e-20,361;CL:0000094,2.08e-19,8;CL:0000219,5.90e-18,386;CL:0000097,2.82e-17,5;CL:0002028,2.82e-17,5;CL:0000048,3.87e-15,427;CL:0000034,4.02e-15,441;CL:0000723,9.47e-15,433;CL:0000081,7.92e-14,11;CL:0000623,1.80e-11,3;CL:0000825,1.80e-11,3;CL:0000226,7.41e-11,3;CL:0000842,7.41e-11,3;CL:0000767,2.26e-10,3;CL:0000775,2.33e-10,3;CL:0000875,6.90e-10,3;CL:0002396,6.90e-10,3;CL:0000163,1.99e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.71e-79;42!CL:0000049;1.01e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.13e-52!80;UBERON:0002390!8.35e-52!102;UBERON:0003061!8.35e-52!102;UBERON:0001474!1.52e-47!86;UBERON:0002193!4.12e-47!112;UBERON:0004765!1.78e-39!101;UBERON:0001434!1.78e-39!101;UBERON:0002405!1.02e-36!115;UBERON:0002204!6.93e-20!167;UBERON:0003081!1.21e-18!216;UBERON:0002384!5.26e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!2.13e-52!80;UBERON:0002390!8.35e-52!102;UBERON:0003061!8.35e-52!102;UBERON:0001474!1.52e-47!86;UBERON:0002193!4.12e-47!112;UBERON:0004765!1.78e-39!101;UBERON:0001434!1.78e-39!101;UBERON:0002405!1.02e-36!115;UBERON:0002204!6.93e-20!167;UBERON:0003081!1.21e-18!216;UBERON:0002384!5.26e-11!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-82,76;UBERON:0001474,1.10e-75,82;UBERON:0002390,4.15e-71,98;UBERON:0003061,4.15e-71,98;UBERON:0004765,4.95e-68,90;UBERON:0002405,1.69e-65,93;UBERON:0002193,1.66e-63,108;UBERON:0001434,3.60e-60,100;UBERON:0002204,1.21e-31,167;UBERON:0003081,6.40e-30,203;UBERON:0002384,2.29e-19,371;UBERON:0000926,5.15e-16,315;UBERON:0004120,5.15e-16,315;UBERON:0006603,5.15e-16,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.0787107813136792,11.4075640286182,1.15148819429164,3.09632246632152,0,0,0,0,0,0,8.30993112797816,8.62341124121609,9.33146744078163,0,0,0,1.59938062657521,1.13362783106643,1.94067248950253,3.95129362739664,5.75635043230556,10.5300166104335,4.31538588483226,2.0492856522328,4.25668013799453,3.7922024881028,3.87290810150296,8.12558919566051,5.45902784673554,3.0019676506363,8.09004544002305,4.28517449319264,6.09765151444578,5.11469700639233,1.31940520074686,2.39356389145958,3.83602275479425,0.870627715885752,2.8369261234557,1.86846674698672,7.78870862295904,7.30076085788282,8.03598725408932,0.605399502633369,1.10483290796269,1.26584954976354,1.90129757680748,4.03948169933583,1.46761051855863,3.03287304095537,1.65194582125657,2.57160938715328,1.99508920618874,2.78483348078726,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,3.36305137788922,0,0.393419540227666,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0,0.589211814949674,0.664601683750863,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8720341211139,0.891786973732369,0,0,0,0,0,0,7.38994856843915,1.14462964217194,28.6112799446265,8.64719720501769,13.2554555097699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,9.26044572949058,8.19384784466166,12.7059605916951,0,0,0,0,0,4.49404214368309,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,13.1585662499356,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0.766021480529467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,2.15361907373044,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.281951753939561,0.128915775947154,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0.358611026963382,0,0,0,0,0,0,0.366724332548599,0,1.33151354837103,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.0787107813136792,11.4075640286182,1.15148819429164,3.09632246632152,0,0,0,0,0,0,8.30993112797816,8.62341124121609,9.33146744078163,0,0,0,1.59938062657521,1.13362783106643,1.94067248950253,3.95129362739664,5.75635043230556,10.5300166104335,4.31538588483226,2.0492856522328,4.25668013799453,3.7922024881028,3.87290810150296,8.12558919566051,5.45902784673554,3.0019676506363,8.09004544002305,4.28517449319264,6.09765151444578,5.11469700639233,1.31940520074686,2.39356389145958,3.83602275479425,0.870627715885752,2.8369261234557,1.86846674698672,7.78870862295904,7.30076085788282,8.03598725408932,0.605399502633369,1.10483290796269,1.26584954976354,1.90129757680748,4.03948169933583,1.46761051855863,3.03287304095537,1.65194582125657,2.57160938715328,1.99508920618874,2.78483348078726,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,3.36305137788922,0,0.393419540227666,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0,0.589211814949674,0.664601683750863,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8720341211139,0.891786973732369,0,0,0,0,0,0,7.38994856843915,1.14462964217194,28.6112799446265,8.64719720501769,13.2554555097699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,9.26044572949058,8.19384784466166,12.7059605916951,0,0,0,0,0,4.49404214368309,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,13.1585662499356,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0.766021480529467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,2.15361907373044,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.281951753939561,0.128915775947154,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0.358611026963382,0,0,0,0,0,0,0.366724332548599,0,1.33151354837103,0,0 | ||
|short_description=p@chr14:93121971..93122003,+ | |short_description=p@chr14:93121971..93122003,+ | ||
}} | }} |
Latest revision as of 23:44, 24 July 2015
Short description: | p@chr14:93121971..93122003, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:93121971..93122003, + |
Coexpression cluster: | C1721_Mast_CD14_Eosinophils_Natural_Peripheral_Basophils_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-82 | 76 |
bone element | 1.10e-75 | 82 |
hematopoietic system | 4.15e-71 | 98 |
blood island | 4.15e-71 | 98 |
skeletal element | 4.95e-68 | 90 |
immune system | 1.69e-65 | 93 |
hemolymphoid system | 1.66e-63 | 108 |
skeletal system | 3.60e-60 | 100 |
musculoskeletal system | 1.21e-31 | 167 |
lateral plate mesoderm | 6.40e-30 | 203 |
connective tissue | 2.29e-19 | 371 |
mesoderm | 5.15e-16 | 315 |
mesoderm-derived structure | 5.15e-16 | 315 |
presumptive mesoderm | 5.15e-16 | 315 |