FFCP PHASE1:Hg19::chr10:49813274..49813287,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:49813274..49813287,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:49813274..49813287,+ | |description=CAGE_peak_at_chr10:49813274..49813287,+ | ||
|id=chr10:49813274..49813287,+ | |id=chr10:49813274..49813287,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.36e-38!42;CL:0000860!7.74e-35!45;CL:0002194!7.36e-29!63;CL:0000576!7.36e-29!63;CL:0000040!7.36e-29!63;CL:0000559!7.36e-29!63;CL:0002009!1.40e-27!65;CL:0000766!3.79e-26!76;CL:0000839!4.59e-26!70;CL:0000557!1.62e-25!71;CL:0000048!1.89e-14!430;CL:0000723!7.23e-14!436;CL:0000763!1.32e-13!112;CL:0000049!1.32e-13!112;CL:0000034!4.05e-13!444;CL:0002371!1.81e-12!591;CL:0002087!3.76e-11!119;CL:0000144!4.22e-11!625;CL:0000738!1.71e-10!140;CL:0002031!3.56e-10!124;CL:0000222!6.33e-09!119;CL:0000134!4.33e-08!358;CL:0000548!1.33e-07!679;CL:0000004!1.33e-07!679;CL:0000255!1.33e-07!679;CL:0002320!1.44e-07!365;CL:0000012!2.01e-07!682;CL:0000680!5.86e-07!57;CL:0000056!5.86e-07!57;CL:0000355!5.86e-07!57 | |ontology_enrichment_celltype=CL:0002057!3.36e-38!42;CL:0000860!7.74e-35!45;CL:0002194!7.36e-29!63;CL:0000576!7.36e-29!63;CL:0000040!7.36e-29!63;CL:0000559!7.36e-29!63;CL:0002009!1.40e-27!65;CL:0000766!3.79e-26!76;CL:0000839!4.59e-26!70;CL:0000557!1.62e-25!71;CL:0000048!1.89e-14!430;CL:0000723!7.23e-14!436;CL:0000763!1.32e-13!112;CL:0000049!1.32e-13!112;CL:0000034!4.05e-13!444;CL:0002371!1.81e-12!591;CL:0002087!3.76e-11!119;CL:0000144!4.22e-11!625;CL:0000738!1.71e-10!140;CL:0002031!3.56e-10!124;CL:0000222!6.33e-09!119;CL:0000134!4.33e-08!358;CL:0000548!1.33e-07!679;CL:0000004!1.33e-07!679;CL:0000255!1.33e-07!679;CL:0002320!1.44e-07!365;CL:0000012!2.01e-07!682;CL:0000680!5.86e-07!57;CL:0000056!5.86e-07!57;CL:0000355!5.86e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.08e-99;33!CL:0002057;9.08e-99;33!CL:0000473;1.42e-69;39!CL:0000234;1.42e-69;39!CL:0000576;3.81e-45;48!CL:0000766;2.68e-31;69!CL:0000763;9.32e-16;100!CL:0002087;6.81e-12;104!CL:0000738;2.14e-08;136!CL:0000767;4.54e-07;3!CL:0000346;6.66e-07;3!CL:1000428;6.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.12e-90,42;CL:0002057,4.12e-90,42;CL:0000473,1.03e-83,48;CL:0000234,1.03e-83,48;CL:0002194,1.24e-65,59;CL:0000576,1.24e-65,59;CL:0000040,1.24e-65,59;CL:0000559,1.24e-65,59;CL:0002009,2.67e-63,61;CL:0000766,2.03e-60,72;CL:0000839,4.48e-58,66;CL:0000557,4.02e-57,67;CL:0000763,3.78e-38,108;CL:0000049,3.78e-38,108;CL:0002087,1.07e-30,115;CL:0002031,3.79e-29,120;CL:0000738,6.52e-29,136;CL:0002032,2.32e-23,161;CL:0000837,2.32e-23,161;CL:0000037,4.22e-22,168;CL:0000988,1.26e-20,177;CL:0000048,1.33e-11,427;CL:0000723,2.50e-11,433;CL:0000034,5.65e-11,441;CL:0000134,6.97e-10,354;CL:0002320,1.52e-09,361;CL:0000219,2.36e-08,386;CL:0000767,5.38e-07,3;CL:0000346,5.90e-07,3;CL:1000428,5.90e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-65;42!CL:0000049;1.81e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.75e-24!80;UBERON:0003081!3.87e-23!216;UBERON:0002204!9.64e-23!167;UBERON:0001474!2.27e-21!86;UBERON:0002193!2.67e-17!112;UBERON:0004765!3.16e-17!101;UBERON:0001434!3.16e-17!101;UBERON:0002390!5.06e-17!102;UBERON:0003061!5.06e-17!102;UBERON:0002405!1.40e-16!115;UBERON:0001637!3.89e-12!42;UBERON:0003509!3.89e-12!42;UBERON:0004572!3.89e-12!42;UBERON:0000055!7.07e-12!69;UBERON:0001981!1.84e-11!60;UBERON:0007500!1.84e-11!60;UBERON:0004537!1.84e-11!60;UBERON:0006965!1.84e-11!60;UBERON:0000926!5.48e-10!448;UBERON:0004120!5.48e-10!448;UBERON:0006603!5.48e-10!448;UBERON:0002049!2.54e-09!79;UBERON:0007798!2.54e-09!79;UBERON:0004290!3.61e-09!70;UBERON:0004872!4.10e-08!84;UBERON:0004573!4.56e-08!33;UBERON:0004571!4.56e-08!33;UBERON:0000486!1.90e-07!82;UBERON:0002384!2.90e-07!375;UBERON:0000914!2.98e-07!83;UBERON:0002329!2.98e-07!83;UBERON:0003077!2.98e-07!83;UBERON:0003059!2.98e-07!83;UBERON:0007282!2.98e-07!83;UBERON:0009618!2.98e-07!83;UBERON:0007285!2.98e-07!83;UBERON:0000467!3.69e-07!625;UBERON:0000480!4.22e-07!626;UBERON:0001009!7.49e-07!113 | |ontology_enrichment_uberon=UBERON:0002371!5.75e-24!80;UBERON:0003081!3.87e-23!216;UBERON:0002204!9.64e-23!167;UBERON:0001474!2.27e-21!86;UBERON:0002193!2.67e-17!112;UBERON:0004765!3.16e-17!101;UBERON:0001434!3.16e-17!101;UBERON:0002390!5.06e-17!102;UBERON:0003061!5.06e-17!102;UBERON:0002405!1.40e-16!115;UBERON:0001637!3.89e-12!42;UBERON:0003509!3.89e-12!42;UBERON:0004572!3.89e-12!42;UBERON:0000055!7.07e-12!69;UBERON:0001981!1.84e-11!60;UBERON:0007500!1.84e-11!60;UBERON:0004537!1.84e-11!60;UBERON:0006965!1.84e-11!60;UBERON:0000926!5.48e-10!448;UBERON:0004120!5.48e-10!448;UBERON:0006603!5.48e-10!448;UBERON:0002049!2.54e-09!79;UBERON:0007798!2.54e-09!79;UBERON:0004290!3.61e-09!70;UBERON:0004872!4.10e-08!84;UBERON:0004573!4.56e-08!33;UBERON:0004571!4.56e-08!33;UBERON:0000486!1.90e-07!82;UBERON:0002384!2.90e-07!375;UBERON:0000914!2.98e-07!83;UBERON:0002329!2.98e-07!83;UBERON:0003077!2.98e-07!83;UBERON:0003059!2.98e-07!83;UBERON:0007282!2.98e-07!83;UBERON:0009618!2.98e-07!83;UBERON:0007285!2.98e-07!83;UBERON:0000467!3.69e-07!625;UBERON:0000480!4.22e-07!626;UBERON:0001009!7.49e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;6.66e-07;3!UBERON:0001992;6.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-49,76;UBERON:0001474,1.39e-45,82;UBERON:0004765,5.54e-41,90;UBERON:0002405,1.85e-39,93;UBERON:0002390,3.98e-37,98;UBERON:0003061,3.98e-37,98;UBERON:0001434,2.95e-36,100;UBERON:0002193,4.23e-33,108;UBERON:0002204,2.21e-29,167;UBERON:0003081,4.43e-26,203;UBERON:0000926,2.16e-17,315;UBERON:0004120,2.16e-17,315;UBERON:0006603,2.16e-17,315;UBERON:0002384,4.40e-09,371;UBERON:0000412,5.90e-07,3;UBERON:0001992,5.90e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,2.16742572642506,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.217010870715852,0,0,0,3.05336301437086,4.91238726795452,0.727752183563449,3.25400651667958,4.52284676824008,5.26500830521676,2.58923153089935,2.56160706529101,4.25668013799453,10.6871161028352,14.846147722428,10.8341189275473,3.38836211176688,4.63940455098338,3.37085226667627,6.73384563215986,8.98601275813062,7.67204550958849,1.64925650093358,1.79517291859469,1.27867425159808,0.580418477257168,2.8369261234557,1.86846674698672,3.76872997885115,1.5644487552606,2.6062661364614,2.42159801053347,3.31449872388808,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0,0.626984899610432,0.258416759169329,0.71153252537342,0,0,1.52054421143703,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,1.1409436430889,0,0.23486899728753,0.485618833104395,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0.260650843404249,0,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,2.0911118104818,0.308033580176089,0,3.47973196830029,1.11194531462352,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0,0,0,1.05650146756755,0,0,1.13008116620243,0,0.66343897524122,0,0.578775534266688,0,0,0.92947049429925,0.563391205064483,0,0,1.78335525740625,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.568209015825267,0,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,2.16742572642506,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.217010870715852,0,0,0,3.05336301437086,4.91238726795452,0.727752183563449,3.25400651667958,4.52284676824008,5.26500830521676,2.58923153089935,2.56160706529101,4.25668013799453,10.6871161028352,14.846147722428,10.8341189275473,3.38836211176688,4.63940455098338,3.37085226667627,6.73384563215986,8.98601275813062,7.67204550958849,1.64925650093358,1.79517291859469,1.27867425159808,0.580418477257168,2.8369261234557,1.86846674698672,3.76872997885115,1.5644487552606,2.6062661364614,2.42159801053347,3.31449872388808,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0,0.626984899610432,0.258416759169329,0.71153252537342,0,0,1.52054421143703,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,1.1409436430889,0,0.23486899728753,0.485618833104395,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0.260650843404249,0,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,2.0911118104818,0.308033580176089,0,3.47973196830029,1.11194531462352,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0,0,0,1.05650146756755,0,0,1.13008116620243,0,0.66343897524122,0,0.578775534266688,0,0,0.92947049429925,0.563391205064483,0,0,1.78335525740625,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.568209015825267,0,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:49813274..49813287,+ | |short_description=p@chr10:49813274..49813287,+ | ||
}} | }} |
Latest revision as of 13:57, 23 July 2015
Short description: | p@chr10:49813274..49813287, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:49813274..49813287, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-49 | 76 |
bone element | 1.39e-45 | 82 |
skeletal element | 5.54e-41 | 90 |
immune system | 1.85e-39 | 93 |
hematopoietic system | 3.98e-37 | 98 |
blood island | 3.98e-37 | 98 |
skeletal system | 2.95e-36 | 100 |
hemolymphoid system | 4.23e-33 | 108 |
musculoskeletal system | 2.21e-29 | 167 |
lateral plate mesoderm | 4.43e-26 | 203 |
mesoderm | 2.16e-17 | 315 |
mesoderm-derived structure | 2.16e-17 | 315 |
presumptive mesoderm | 2.16e-17 | 315 |
connective tissue | 4.40e-09 | 371 |
dermal papilla | 5.90e-07 | 3 |
papillary layer of dermis | 5.90e-07 | 3 |