FFCP PHASE1:Hg19::chr16:77822451..77822469,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57687 | |EntrezGene=57687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29315 | |HGNC=29315 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ6 | |UniProt=Q9HCJ6 | ||
|association_with_transcript=-13bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | |association_with_transcript=-13bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | ||
|cluster_id=chr16:77822451..77822469,+ | |||
|coexpression_cluster_id=C3590 | |||
|description=CAGE_peak_2_at_VAT1L_5end | |description=CAGE_peak_2_at_VAT1L_5end | ||
|id=chr16:77822451..77822469,+ | |id=chr16:77822451..77822469,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.90e-14!180;CL:0000192!5.28e-09!42;CL:0000514!5.28e-09!42;CL:0000393!6.57e-09!60;CL:0000211!6.57e-09!60;CL:0000183!2.25e-08!59;CL:0000057!4.92e-08!75;CL:0002539!8.80e-08!10;CL:0000187!1.40e-07!54;CL:0002620!6.76e-07!23;CL:0000359!8.93e-07!32 | |ontology_enrichment_celltype=CL:0000055!9.90e-14!180;CL:0000192!5.28e-09!42;CL:0000514!5.28e-09!42;CL:0000393!6.57e-09!60;CL:0000211!6.57e-09!60;CL:0000183!2.25e-08!59;CL:0000057!4.92e-08!75;CL:0002539!8.80e-08!10;CL:0000187!1.40e-07!54;CL:0002620!6.76e-07!23;CL:0000359!8.93e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002539;3.06e-08;10!CL:0000192;4.12e-07;43!CL:0000359;4.20e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.88e-10,43;CL:0000514,4.88e-10,43;CL:0002539,3.14e-08,10;CL:0000393,6.96e-08,61;CL:0000211,6.96e-08,61;CL:0000359,1.50e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.12e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.82e-33!94;UBERON:0001016!1.82e-33!94;UBERON:0005743!3.28e-33!86;UBERON:0003075!4.77e-33!86;UBERON:0007284!4.77e-33!86;UBERON:0001017!6.93e-31!82;UBERON:0002346!1.36e-30!90;UBERON:0001049!1.04e-29!57;UBERON:0005068!1.04e-29!57;UBERON:0006241!1.04e-29!57;UBERON:0007135!1.04e-29!57;UBERON:0002616!1.52e-25!59;UBERON:0000955!2.69e-25!69;UBERON:0006238!2.69e-25!69;UBERON:0000025!5.84e-25!194;UBERON:0003056!1.07e-22!61;UBERON:0000033!4.05e-22!123;UBERON:0004111!9.31e-22!241;UBERON:0004121!2.54e-21!169;UBERON:0000153!4.14e-21!129;UBERON:0007811!4.14e-21!129;UBERON:0000477!1.58e-20!286;UBERON:0000924!3.12e-20!173;UBERON:0006601!3.12e-20!173;UBERON:0002780!4.55e-20!41;UBERON:0001890!4.55e-20!41;UBERON:0006240!4.55e-20!41;UBERON:0003080!3.82e-19!42;UBERON:0000483!7.69e-19!309;UBERON:0000119!2.16e-18!312;UBERON:0007023!2.39e-18!115;UBERON:0002020!9.97e-18!34;UBERON:0003528!9.97e-18!34;UBERON:0001893!3.00e-17!34;UBERON:0000468!3.07e-17!659;UBERON:0002791!1.09e-16!33;UBERON:0001869!1.51e-16!32;UBERON:0000475!5.48e-15!365;UBERON:0000467!6.60e-15!625;UBERON:0000480!1.01e-14!626;UBERON:0002049!4.06e-14!79;UBERON:0007798!4.06e-14!79;UBERON:0000055!1.49e-12!69;UBERON:0001981!2.95e-12!60;UBERON:0007500!2.95e-12!60;UBERON:0004537!2.95e-12!60;UBERON:0006965!2.95e-12!60;UBERON:0003076!4.51e-12!15;UBERON:0003057!4.51e-12!15;UBERON:0000956!5.07e-12!25;UBERON:0000203!5.07e-12!25;UBERON:0000481!2.27e-11!347;UBERON:0001009!3.38e-11!113;UBERON:0002619!7.80e-11!22;UBERON:0004732!9.29e-11!13;UBERON:0000947!1.22e-10!21;UBERON:0010191!1.22e-10!21;UBERON:0004535!1.64e-10!110;UBERON:0000922!2.69e-10!612;UBERON:0004872!3.29e-10!84;UBERON:0001950!4.77e-10!20;UBERON:0004733!5.38e-10!12;UBERON:0002028!5.38e-10!12;UBERON:0007277!5.38e-10!12;UBERON:0001637!7.14e-10!42;UBERON:0003509!7.14e-10!42;UBERON:0004572!7.14e-10!42;UBERON:0001135!3.98e-09!15;UBERON:0002050!4.44e-08!605;UBERON:0005423!4.44e-08!605;UBERON:0000064!5.36e-08!219;UBERON:0000923!6.58e-08!604;UBERON:0005291!6.58e-08!604;UBERON:0006598!6.58e-08!604;UBERON:0002532!6.58e-08!604;UBERON:0004573!7.24e-08!33;UBERON:0004571!7.24e-08!33;UBERON:0004237!8.80e-08!10;UBERON:0004695!8.80e-08!10;UBERON:0002111!8.80e-08!10;UBERON:0004178!8.80e-08!10;UBERON:0002680!1.28e-07!9;UBERON:0001895!1.28e-07!9;UBERON:0010092!1.28e-07!9;UBERON:0002308!2.24e-07!9;UBERON:0000125!2.24e-07!9;UBERON:0003914!2.64e-07!118;UBERON:0002420!7.29e-07!9;UBERON:0007245!7.29e-07!9;UBERON:0010009!7.29e-07!9;UBERON:0010011!7.29e-07!9;UBERON:0000454!7.29e-07!9 | |ontology_enrichment_uberon=UBERON:0000073!1.82e-33!94;UBERON:0001016!1.82e-33!94;UBERON:0005743!3.28e-33!86;UBERON:0003075!4.77e-33!86;UBERON:0007284!4.77e-33!86;UBERON:0001017!6.93e-31!82;UBERON:0002346!1.36e-30!90;UBERON:0001049!1.04e-29!57;UBERON:0005068!1.04e-29!57;UBERON:0006241!1.04e-29!57;UBERON:0007135!1.04e-29!57;UBERON:0002616!1.52e-25!59;UBERON:0000955!2.69e-25!69;UBERON:0006238!2.69e-25!69;UBERON:0000025!5.84e-25!194;UBERON:0003056!1.07e-22!61;UBERON:0000033!4.05e-22!123;UBERON:0004111!9.31e-22!241;UBERON:0004121!2.54e-21!169;UBERON:0000153!4.14e-21!129;UBERON:0007811!4.14e-21!129;UBERON:0000477!1.58e-20!286;UBERON:0000924!3.12e-20!173;UBERON:0006601!3.12e-20!173;UBERON:0002780!4.55e-20!41;UBERON:0001890!4.55e-20!41;UBERON:0006240!4.55e-20!41;UBERON:0003080!3.82e-19!42;UBERON:0000483!7.69e-19!309;UBERON:0000119!2.16e-18!312;UBERON:0007023!2.39e-18!115;UBERON:0002020!9.97e-18!34;UBERON:0003528!9.97e-18!34;UBERON:0001893!3.00e-17!34;UBERON:0000468!3.07e-17!659;UBERON:0002791!1.09e-16!33;UBERON:0001869!1.51e-16!32;UBERON:0000475!5.48e-15!365;UBERON:0000467!6.60e-15!625;UBERON:0000480!1.01e-14!626;UBERON:0002049!4.06e-14!79;UBERON:0007798!4.06e-14!79;UBERON:0000055!1.49e-12!69;UBERON:0001981!2.95e-12!60;UBERON:0007500!2.95e-12!60;UBERON:0004537!2.95e-12!60;UBERON:0006965!2.95e-12!60;UBERON:0003076!4.51e-12!15;UBERON:0003057!4.51e-12!15;UBERON:0000956!5.07e-12!25;UBERON:0000203!5.07e-12!25;UBERON:0000481!2.27e-11!347;UBERON:0001009!3.38e-11!113;UBERON:0002619!7.80e-11!22;UBERON:0004732!9.29e-11!13;UBERON:0000947!1.22e-10!21;UBERON:0010191!1.22e-10!21;UBERON:0004535!1.64e-10!110;UBERON:0000922!2.69e-10!612;UBERON:0004872!3.29e-10!84;UBERON:0001950!4.77e-10!20;UBERON:0004733!5.38e-10!12;UBERON:0002028!5.38e-10!12;UBERON:0007277!5.38e-10!12;UBERON:0001637!7.14e-10!42;UBERON:0003509!7.14e-10!42;UBERON:0004572!7.14e-10!42;UBERON:0001135!3.98e-09!15;UBERON:0002050!4.44e-08!605;UBERON:0005423!4.44e-08!605;UBERON:0000064!5.36e-08!219;UBERON:0000923!6.58e-08!604;UBERON:0005291!6.58e-08!604;UBERON:0006598!6.58e-08!604;UBERON:0002532!6.58e-08!604;UBERON:0004573!7.24e-08!33;UBERON:0004571!7.24e-08!33;UBERON:0004237!8.80e-08!10;UBERON:0004695!8.80e-08!10;UBERON:0002111!8.80e-08!10;UBERON:0004178!8.80e-08!10;UBERON:0002680!1.28e-07!9;UBERON:0001895!1.28e-07!9;UBERON:0010092!1.28e-07!9;UBERON:0002308!2.24e-07!9;UBERON:0000125!2.24e-07!9;UBERON:0003914!2.64e-07!118;UBERON:0002420!7.29e-07!9;UBERON:0007245!7.29e-07!9;UBERON:0010009!7.29e-07!9;UBERON:0010011!7.29e-07!9;UBERON:0000454!7.29e-07!9 | ||
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| ||
|short_description=p2@VAT1L | |short_description=p2@VAT1L | ||
}} | }} |
Latest revision as of 22:50, 17 September 2015
Short description: | p2@VAT1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VAT1L_5end |
Coexpression cluster: | C3590_teratocarcinoma_medulla_putamen_locus_astrocytoma_retina_caudate |
Association with transcript: | -13bp_to_ENST00000302536, NM_020927, uc002ffg.1_5end |
EntrezGene: | VAT1L |
HGNC: | 29315 |
UniProt: | Q9HCJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.88e-10 | 43 |
smooth muscle myoblast | 4.88e-10 | 43 |
aortic smooth muscle cell | 3.14e-08 | 10 |
electrically responsive cell | 6.96e-08 | 61 |
electrically active cell | 6.96e-08 | 61 |
vascular associated smooth muscle cell | 1.50e-07 | 32 |