FFCP PHASE1:Hg19::chr1:26633491..26633502,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91544 | |EntrezGene=91544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30600 | |HGNC=30600 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T118 | |UniProt=Q5T118 | ||
|association_with_transcript=-11bp_to_ENST00000450041_5end | |association_with_transcript=-11bp_to_ENST00000450041_5end | ||
|cluster_id=chr1:26633491..26633502,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_8_at_UBXN11_5end | |description=CAGE_peak_8_at_UBXN11_5end | ||
|id=chr1:26633491..26633502,- | |id=chr1:26633491..26633502,- | ||
|ontology_enrichment_celltype=CL:0002057!1.56e-109!42;CL:0000860!2.06e-101!45;CL:0002194!3.85e-82!63;CL:0000576!3.85e-82!63;CL:0000040!3.85e-82!63;CL:0000559!3.85e-82!63;CL:0002009!2.95e-79!65;CL:0000766!8.52e-76!76;CL:0000839!9.32e-73!70;CL:0000557!1.45e-71!71;CL:0002087!2.64e-54!119;CL:0000738!3.80e-50!140;CL:0000763!1.92e-49!112;CL:0000049!1.92e-49!112;CL:0002031!3.74e-45!124;CL:0000037!1.01e-39!172;CL:0000566!1.01e-39!172;CL:0002032!6.93e-37!165;CL:0000837!6.93e-37!165;CL:0000988!9.71e-37!182;CL:0002393!4.50e-24!9;CL:0002397!4.50e-24!9;CL:0000134!9.00e-14!358;CL:0002320!3.17e-13!365;CL:0000219!2.63e-11!390;CL:0000875!4.75e-09!3;CL:0002396!4.75e-09!3;CL:0000048!4.93e-09!430;CL:0000723!1.03e-08!436;CL:0000767!1.38e-08!3;CL:0000842!1.84e-08!3;CL:0000034!2.67e-08!444 | |ontology_enrichment_celltype=CL:0002057!1.56e-109!42;CL:0000860!2.06e-101!45;CL:0002194!3.85e-82!63;CL:0000576!3.85e-82!63;CL:0000040!3.85e-82!63;CL:0000559!3.85e-82!63;CL:0002009!2.95e-79!65;CL:0000766!8.52e-76!76;CL:0000839!9.32e-73!70;CL:0000557!1.45e-71!71;CL:0002087!2.64e-54!119;CL:0000738!3.80e-50!140;CL:0000763!1.92e-49!112;CL:0000049!1.92e-49!112;CL:0002031!3.74e-45!124;CL:0000037!1.01e-39!172;CL:0000566!1.01e-39!172;CL:0002032!6.93e-37!165;CL:0000837!6.93e-37!165;CL:0000988!9.71e-37!182;CL:0002393!4.50e-24!9;CL:0002397!4.50e-24!9;CL:0000134!9.00e-14!358;CL:0002320!3.17e-13!365;CL:0000219!2.63e-11!390;CL:0000875!4.75e-09!3;CL:0002396!4.75e-09!3;CL:0000048!4.93e-09!430;CL:0000723!1.03e-08!436;CL:0000767!1.38e-08!3;CL:0000842!1.84e-08!3;CL:0000034!2.67e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-103;33!CL:0002057;1.57e-103;33!CL:0000473;4.45e-82;39!CL:0000234;4.45e-82;39!CL:0000576;5.11e-75;48!CL:0000766;1.42e-49;69!CL:0000763;2.84e-22;100!CL:0002393;2.43e-21;6!CL:0002397;2.43e-21;6!CL:0002087;2.04e-16;104!CL:0000738;2.18e-13;136!CL:0000988;4.26e-08;177!CL:0000875;1.19e-07;3!CL:0002396;1.19e-07;3!CL:0000767;2.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-141,42;CL:0002057,1.50e-141,42;CL:0000473,6.90e-138,48;CL:0000234,6.90e-138,48;CL:0002194,5.86e-109,59;CL:0000576,5.86e-109,59;CL:0000040,5.86e-109,59;CL:0000559,5.86e-109,59;CL:0002009,3.18e-105,61;CL:0000766,1.46e-98,72;CL:0000839,7.28e-97,66;CL:0000557,2.44e-95,67;CL:0000763,1.00e-63,108;CL:0000049,1.00e-63,108;CL:0002087,3.13e-56,115;CL:0000738,3.89e-52,136;CL:0002031,1.47e-50,120;CL:0000037,6.29e-41,168;CL:0002032,1.41e-40,161;CL:0000837,1.41e-40,161;CL:0000988,1.69e-38,177;CL:0002393,7.22e-27,9;CL:0002397,7.22e-27,9;CL:0000134,1.10e-15,354;CL:0002320,3.07e-15,361;CL:0000219,1.15e-13,386;CL:0000048,9.72e-12,427;CL:0000723,1.79e-11,433;CL:0000034,3.96e-11,441;CL:0000875,1.06e-07,3;CL:0002396,1.06e-07,3;CL:0000767,2.20e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-97;42!CL:0000049;7.30e-23;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.74e-66!102;UBERON:0003061!9.74e-66!102;UBERON:0002371!3.61e-62!80;UBERON:0002193!1.20e-58!112;UBERON:0001474!5.49e-57!86;UBERON:0004765!1.05e-46!101;UBERON:0001434!1.05e-46!101;UBERON:0002405!1.87e-43!115;UBERON:0003081!9.87e-24!216;UBERON:0002204!2.22e-23!167;UBERON:0002384!3.40e-13!375;UBERON:0000926!1.75e-07!448;UBERON:0004120!1.75e-07!448;UBERON:0006603!1.75e-07!448;UBERON:0000178!1.98e-07!15;UBERON:0000179!1.98e-07!15;UBERON:0000463!1.98e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!9.74e-66!102;UBERON:0003061!9.74e-66!102;UBERON:0002371!3.61e-62!80;UBERON:0002193!1.20e-58!112;UBERON:0001474!5.49e-57!86;UBERON:0004765!1.05e-46!101;UBERON:0001434!1.05e-46!101;UBERON:0002405!1.87e-43!115;UBERON:0003081!9.87e-24!216;UBERON:0002204!2.22e-23!167;UBERON:0002384!3.40e-13!375;UBERON:0000926!1.75e-07!448;UBERON:0004120!1.75e-07!448;UBERON:0006603!1.75e-07!448;UBERON:0000178!1.98e-07!15;UBERON:0000179!1.98e-07!15;UBERON:0000463!1.98e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.13e-83,76;UBERON:0001474,7.14e-77,82;UBERON:0004765,1.65e-69,90;UBERON:0002390,4.43e-67,98;UBERON:0003061,4.43e-67,98;UBERON:0002405,4.52e-67,93;UBERON:0001434,6.05e-62,100;UBERON:0002193,2.74e-60,108;UBERON:0002204,1.89e-34,167;UBERON:0003081,6.34e-29,203;UBERON:0000926,4.19e-16,315;UBERON:0004120,4.19e-16,315;UBERON:0006603,4.19e-16,315;UBERON:0002384,1.25e-14,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.54816123316076,0,0,0,0,0,0,3.32397245119126,3.20871115952227,1.30206522429511,0,0,0,1.89017710413434,1.13362783106643,2.18325655069035,1.62700325833979,2.05583944010913,3.71647645074124,0.863077176966451,0.768482119587302,1.18241114944293,3.44745680736619,0.645484683583826,1.35426486594342,2.63539275359647,1.36453075028923,1.57306439111559,2.75475503133812,2.88836124368484,1.27867425159808,2.63881040149373,1.99463657621632,2.13112375266347,1.16083695451434,0.56738522469114,3.11411124497787,2.26123798731069,4.17186334736161,1.73751075764093,3.63239701580021,2.94622108790052,0.949387162322653,0.845021145247767,2.12604299965044,1.25795187305026,1.12328631146495,2.4028302854641,2.57160938715328,1.42506371870624,2.58591680358817,0.91332076882317,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.50999940573032,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.54816123316076,0,0,0,0,0,0,3.32397245119126,3.20871115952227,1.30206522429511,0,0,0,1.89017710413434,1.13362783106643,2.18325655069035,1.62700325833979,2.05583944010913,3.71647645074124,0.863077176966451,0.768482119587302,1.18241114944293,3.44745680736619,0.645484683583826,1.35426486594342,2.63539275359647,1.36453075028923,1.57306439111559,2.75475503133812,2.88836124368484,1.27867425159808,2.63881040149373,1.99463657621632,2.13112375266347,1.16083695451434,0.56738522469114,3.11411124497787,2.26123798731069,4.17186334736161,1.73751075764093,3.63239701580021,2.94622108790052,0.949387162322653,0.845021145247767,2.12604299965044,1.25795187305026,1.12328631146495,2.4028302854641,2.57160938715328,1.42506371870624,2.58591680358817,0.91332076882317,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.50999940573032,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@UBXN11 | |short_description=p8@UBXN11 | ||
}} | }} |
Latest revision as of 05:30, 17 September 2015
Short description: | p8@UBXN11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_UBXN11_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -11bp_to_ENST00000450041_5end |
EntrezGene: | UBXN11 |
HGNC: | 30600 |
UniProt: | Q5T118 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.13e-83 | 76 |
bone element | 7.14e-77 | 82 |
skeletal element | 1.65e-69 | 90 |
hematopoietic system | 4.43e-67 | 98 |
blood island | 4.43e-67 | 98 |
immune system | 4.52e-67 | 93 |
skeletal system | 6.05e-62 | 100 |
hemolymphoid system | 2.74e-60 | 108 |
musculoskeletal system | 1.89e-34 | 167 |
lateral plate mesoderm | 6.34e-29 | 203 |
mesoderm | 4.19e-16 | 315 |
mesoderm-derived structure | 4.19e-16 | 315 |
presumptive mesoderm | 4.19e-16 | 315 |
connective tissue | 1.25e-14 | 371 |