FFCP PHASE1:Hg19::chr17:76036984..76036996,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:76036984..76036996,+
|short_description=p5@TNRC6C
|description=CAGE_peak_5_at_TNRC6C_5end
|association_with_transcript=-131bp_to_ENST00000538251_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57690 | |EntrezGene=57690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29318 | |HGNC=29318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-131bp_to_ENST00000538251_5end | |||
|cluster_id=chr17:76036984..76036996,+ | |||
|description=CAGE_peak_5_at_TNRC6C_5end | |||
|id=chr17:76036984..76036996,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;2.46e-12;1!CL:0000557;2.46e-12;1!CL:0002591;2.46e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.08e-12,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.87e-15!69;UBERON:0006238!1.87e-15!69;UBERON:0002780!3.04e-15!41;UBERON:0001890!3.04e-15!41;UBERON:0006240!3.04e-15!41;UBERON:0000033!4.56e-15!123;UBERON:0001049!5.32e-15!57;UBERON:0005068!5.32e-15!57;UBERON:0006241!5.32e-15!57;UBERON:0007135!5.32e-15!57;UBERON:0003080!1.28e-14!42;UBERON:0000073!1.38e-14!94;UBERON:0001016!1.38e-14!94;UBERON:0000153!3.06e-14!129;UBERON:0007811!3.06e-14!129;UBERON:0007023!3.16e-14!115;UBERON:0002616!5.44e-14!59;UBERON:0005743!9.21e-14!86;UBERON:0001017!2.30e-13!82;UBERON:0004121!1.42e-12!169;UBERON:0003075!1.73e-12!86;UBERON:0007284!1.73e-12!86;UBERON:0001893!1.84e-12!34;UBERON:0000924!2.75e-12!173;UBERON:0006601!2.75e-12!173;UBERON:0002791!6.09e-12!33;UBERON:0002346!6.16e-12!90;UBERON:0002020!2.85e-11!34;UBERON:0003528!2.85e-11!34;UBERON:0001869!8.30e-11!32;UBERON:0003056!1.05e-10!61;UBERON:0000467!1.38e-09!625;UBERON:0000480!1.75e-09!626;UBERON:0000062!1.31e-08!511;UBERON:0002619!1.38e-08!22;UBERON:0001950!1.83e-08!20;UBERON:0000468!7.62e-08!659;UBERON:0000956!9.09e-08!25;UBERON:0000203!9.09e-08!25;UBERON:0000475!7.49e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;3.00e-25;4!UBERON:0001905;6.82e-23;2!UBERON:0002757;6.82e-23;2!UBERON:0010134;6.82e-23;2!UBERON:0005408;6.82e-23;2!UBERON:0001899;6.82e-23;2!UBERON:0001894;1.02e-14;7!UBERON:0002038;8.83e-13;1!UBERON:0009661;8.83e-13;1!UBERON:0002950;8.83e-13;1!UBERON:0001891;8.83e-13;1!UBERON:0002336;2.46e-12;1!UBERON:0007195;2.46e-12;1!UBERON:0011215;2.46e-12;1!UBERON:0001018;2.46e-12;1!UBERON:0002473;2.46e-12;1!UBERON:0005340;2.46e-12;1!UBERON:0003544;2.46e-12;1!UBERON:0005970;2.46e-12;1!UBERON:0002316;2.46e-12;1!UBERON:0001020;2.46e-12;1!UBERON:0002437;2.46e-12;1!UBERON:0003296;6.02e-12;4!UBERON:0010133;6.02e-12;4!UBERON:0000073;1.21e-07;53!UBERON:0002616;1.21e-07;53!UBERON:0009663;1.90e-07;7!UBERON:0002780;1.93e-07;41!UBERON:0001890;1.93e-07;41!UBERON:0001875;5.11e-07;2!UBERON:0006514;5.11e-07;2!UBERON:0000341;8.52e-07;2!UBERON:0001897;8.52e-07;2!UBERON:0005162;8.52e-07;2!UBERON:0000122;8.52e-07;2!UBERON:0000078;8.52e-07;2!UBERON:0002012;8.52e-07;2!UBERON:0010225;8.52e-07;2!UBERON:0008886;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.82e-25,4;UBERON:0001905,5.47e-23,2;UBERON:0002757,5.47e-23,2;UBERON:0010134,5.47e-23,2;UBERON:0005408,5.47e-23,2;UBERON:0001899,5.47e-23,2;UBERON:0001894,7.73e-15,7;UBERON:0006222,7.73e-15,7;UBERON:0002038,1.11e-12,1;UBERON:0009661,1.11e-12,1;UBERON:0002950,1.11e-12,1;UBERON:0001891,1.11e-12,1;UBERON:0009616,1.11e-12,1;UBERON:0010286,1.11e-12,1;UBERON:0002336,1.96e-12,1;UBERON:0011215,1.96e-12,1;UBERON:0001018,1.96e-12,1;UBERON:0002473,1.96e-12,1;UBERON:0005340,1.96e-12,1;UBERON:0003544,1.96e-12,1;UBERON:0005970,1.96e-12,1;UBERON:0002316,1.96e-12,1;UBERON:0001020,1.96e-12,1;UBERON:0002437,1.96e-12,1;UBERON:0007195,3.45e-12,1;UBERON:0003075,4.36e-12,82;UBERON:0007284,4.36e-12,82;UBERON:0003296,5.40e-12,4;UBERON:0010133,5.40e-12,4;UBERON:0002346,1.81e-11,86;UBERON:0003056,1.23e-10,61;UBERON:0000073,1.69e-09,53;UBERON:0002616,1.69e-09,53;UBERON:0010371,2.85e-09,104;UBERON:0002780,3.31e-09,41;UBERON:0001890,3.31e-09,41;UBERON:0003080,3.31e-09,41;UBERON:0006240,3.31e-09,41;UBERON:0001049,5.80e-09,56;UBERON:0005068,5.80e-09,56;UBERON:0006241,5.80e-09,56;UBERON:0007135,5.80e-09,56;UBERON:0009663,1.96e-07,7;UBERON:0000955,3.59e-07,68;UBERON:0006238,3.59e-07,68;UBERON:0001875,4.83e-07,2;UBERON:0006514,4.83e-07,2;UBERON:0010314,4.98e-07,132;UBERON:0001897,6.80e-07,2;UBERON:0010225,6.80e-07,2;UBERON:0005162,7.61e-07,2;UBERON:0000122,7.61e-07,2;UBERON:0007023,8.81e-07,114;UBERON:0000078,9.54e-07,2;UBERON:0007497,9.54e-07,2;UBERON:0003643,9.54e-07,2;UBERON:0003504,9.54e-07,2;UBERON:0003469,9.54e-07,2;UBERON:0003496,9.54e-07,2;UBERON:0002012,9.54e-07,2;UBERON:0008886,9.54e-07,2;UBERON:0007303,9.54e-07,2;UBERON:0002061,9.54e-07,2;UBERON:0005432,9.54e-07,2;UBERON:0004363,9.54e-07,2 | |||
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| ||
|short_description=p5@TNRC6C | |||
}} | }} |
Latest revision as of 20:12, 17 September 2015
Short description: | p5@TNRC6C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNRC6C_5end |
Coexpression cluster: | NA |
Association with transcript: | -131bp_to_ENST00000538251_5end |
EntrezGene: | TNRC6C |
HGNC: | 29318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.08e-12 | 1 |