FFCP PHASE1:Hg19::chr17:7751129..7751150,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:7751129..7751150,+
|short_description=p8@KDM6B
|description=CAGE_peak_8_at_KDM6B_5end
|association_with_transcript=265bp_to_uc002gix.2_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=265bp_to_uc002gix.2_5end | |||
|cluster_id=chr17:7751129..7751150,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_8_at_KDM6B_5end | |||
|id=chr17:7751129..7751150,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.73e-17!42;CL:0000860!5.93e-16!45;CL:0000766!9.11e-11!76;CL:0002087!1.28e-10!119;CL:0000738!2.05e-10!140;CL:0000839!5.56e-10!70;CL:0002031!9.55e-10!124;CL:0000557!1.16e-09!71;CL:0002194!3.68e-09!63;CL:0000576!3.68e-09!63;CL:0000040!3.68e-09!63;CL:0000559!3.68e-09!63;CL:0002009!1.57e-08!65;CL:0000988!6.26e-08!182;CL:0000037!1.53e-07!172;CL:0000566!1.53e-07!172;CL:0002032!2.14e-07!165;CL:0000837!2.14e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-53;33!CL:0002057;3.50e-53;33!CL:0000473;3.40e-39;39!CL:0000234;3.40e-39;39!CL:0000576;9.00e-26;48!CL:0000766;9.06e-18;69!CL:0000763;7.16e-12;100!CL:0000775;6.75e-10;3!CL:0002087;1.32e-08;104!CL:0000094;7.95e-08;8!CL:0000738;1.45e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.20e-50,42;CL:0002057,1.20e-50,42;CL:0000473,7.83e-44,48;CL:0000234,7.83e-44,48;CL:0000766,1.14e-41,72;CL:0002194,2.73e-34,59;CL:0000576,2.73e-34,59;CL:0000040,2.73e-34,59;CL:0000559,2.73e-34,59;CL:0000839,6.54e-34,66;CL:0000557,2.37e-33,67;CL:0002009,4.66e-33,61;CL:0000763,2.14e-26,108;CL:0000049,2.14e-26,108;CL:0000738,4.42e-22,136;CL:0002031,6.78e-19,120;CL:0002032,6.18e-18,161;CL:0000837,6.18e-18,161;CL:0002087,9.14e-18,115;CL:0000037,5.40e-17,168;CL:0000988,6.82e-16,177;CL:0000775,6.46e-10,3;CL:0000094,7.51e-08,8;CL:0000134,4.71e-07,354;CL:0002320,8.11e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-37;42!CL:0000049;3.89e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-08!102;UBERON:0003061!1.27e-08!102;UBERON:0001474!2.01e-07!86;UBERON:0002371!3.29e-07!80;UBERON:0002193!4.28e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.30e-07;1!UBERON:0005208;1.30e-07;1!UBERON:0004145;1.30e-07;1!UBERON:0005946;1.30e-07;1!UBERON:0005965;1.30e-07;1!UBERON:0002078;1.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.64e-29,76;UBERON:0001474,1.39e-26,82;UBERON:0002390,5.36e-24,98;UBERON:0003061,5.36e-24,98;UBERON:0004765,6.93e-24,90;UBERON:0002405,5.42e-23,93;UBERON:0002193,2.11e-21,108;UBERON:0001434,4.10e-21,100;UBERON:0002204,4.69e-11,167;UBERON:0003081,1.35e-10,203;UBERON:0002134,1.48e-07,1;UBERON:0005208,1.48e-07,1;UBERON:0005946,1.48e-07,1;UBERON:0005965,1.48e-07,1;UBERON:0002078,1.48e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0,0,1.40381113229099,0.651032612147555,0,0,0,0.726991193897824,0,0.970336244751265,2.55671940596253,0.411167888021826,4.02618282163635,7.19230980805376,2.30544635876191,0.709446689665756,2.75796544589295,1.29096936716765,4.06279459783025,3.38836211176688,3.27487380069415,0.674170453335254,5.50951006267625,0.962787081228281,5.75403413219137,0.989553900560148,0.398927315243264,0.852449501065388,7.2552309657146,4.53908179752912,6.22822248995575,2.26123798731069,4.69334626578181,0,3.63239701580021,1.10483290796269,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.52909291250092,0,0,0,0,0.786021525498329,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.724122019413995,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2138662779418,0,0.207328115540772,0.576479813667846,0.25248486685276,0.253991577168676,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0.197030760201927,0.862510299438069,0.513372145118994,0.254094624222463,0,0,0.335032530668698,1.27587750330633,7.49007023947182,26.9245313283622,0,0.24538298343828,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0.355123450626254,0,0,0,0,0.40101294060657,0.276242966807689,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0.313359791546046,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0.306806047506464,0.492339221844278,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.583209226766509,0.347249989866585,0,0,1.52581736317083,0.663475559587348,0.295547618953547,0,0,0,0.230850775511391,0.113942055847001,0,0.269272933229316,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0.392125068635479,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0,0,0,0.343972064943233,0.0967563312890851,0,0,0,0.529536760149002,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0.432271251462318,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,2.15361907373044,0,1.28767814440971,0,0.0671834724867263,0.360299883542404,0,0.157566364614447,0,0,0.0984274815147488,0,0,0.544813624446302,0,0.412618309791701,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0.610131324509816,0.1251909307065,0,0.221858103073705,0,0.276697269872462,0,0,0,0,0.468334905806882,0.434763085832475,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0.314531883711793,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.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| ||
|short_description=p8@KDM6B | |||
}} | }} |
Latest revision as of 01:54, 18 September 2015
Short description: | p8@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KDM6B_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 265bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.20e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-50 | 42 |
defensive cell | 7.83e-44 | 48 |
phagocyte | 7.83e-44 | 48 |
myeloid leukocyte | 1.14e-41 | 72 |
monopoietic cell | 2.73e-34 | 59 |
monocyte | 2.73e-34 | 59 |
monoblast | 2.73e-34 | 59 |
promonocyte | 2.73e-34 | 59 |
myeloid lineage restricted progenitor cell | 6.54e-34 | 66 |
granulocyte monocyte progenitor cell | 2.37e-33 | 67 |
macrophage dendritic cell progenitor | 4.66e-33 | 61 |
myeloid cell | 2.14e-26 | 108 |
common myeloid progenitor | 2.14e-26 | 108 |
leukocyte | 4.42e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 6.78e-19 | 120 |
hematopoietic oligopotent progenitor cell | 6.18e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.18e-18 | 161 |
nongranular leukocyte | 9.14e-18 | 115 |
hematopoietic stem cell | 5.40e-17 | 168 |
hematopoietic cell | 6.82e-16 | 177 |
neutrophil | 6.46e-10 | 3 |
granulocyte | 7.51e-08 | 8 |
mesenchymal cell | 4.71e-07 | 354 |
connective tissue cell | 8.11e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.64e-29 | 76 |
bone element | 1.39e-26 | 82 |
hematopoietic system | 5.36e-24 | 98 |
blood island | 5.36e-24 | 98 |
skeletal element | 6.93e-24 | 90 |
immune system | 5.42e-23 | 93 |
hemolymphoid system | 2.11e-21 | 108 |
skeletal system | 4.10e-21 | 100 |
musculoskeletal system | 4.69e-11 | 167 |
lateral plate mesoderm | 1.35e-10 | 203 |
tricuspid valve | 1.48e-07 | 1 |
right atrium valve | 1.48e-07 | 1 |
outflow tract of atrium | 1.48e-07 | 1 |
outflow part of right atrium | 1.48e-07 | 1 |
right cardiac atrium | 1.48e-07 | 1 |