FFCP PHASE1:Hg19::chr11:10477834..10477845,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=272 | |EntrezGene=272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=470 | |HGNC=470 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z763 | |UniProt=B7Z763 | ||
|association_with_transcript=101bp_to_ENST00000528723_5end | |association_with_transcript=101bp_to_ENST00000528723_5end | ||
|cluster_id=chr11:10477834..10477845,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_20_at_AMPD3_5end | |description=CAGE_peak_20_at_AMPD3_5end | ||
|id=chr11:10477834..10477845,+ | |id=chr11:10477834..10477845,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.66e-29!42;CL:0002031!1.23e-28!124;CL:0002087!5.09e-28!119;CL:0000860!1.25e-26!45;CL:0002009!4.74e-26!65;CL:0002194!1.31e-25!63;CL:0000576!1.31e-25!63;CL:0000040!1.31e-25!63;CL:0000559!1.31e-25!63;CL:0000839!1.21e-24!70;CL:0002032!1.94e-24!165;CL:0000837!1.94e-24!165;CL:0000738!3.60e-24!140;CL:0000037!1.47e-23!172;CL:0000566!1.47e-23!172;CL:0000557!8.33e-23!71;CL:0000988!3.75e-21!182;CL:0000766!3.42e-19!76;CL:0000763!4.16e-19!112;CL:0000049!4.16e-19!112;CL:0000945!2.41e-13!24;CL:0000826!2.41e-13!24;CL:0000134!2.53e-07!358;CL:0002320!7.87e-07!365 | |ontology_enrichment_celltype=CL:0002057!2.66e-29!42;CL:0002031!1.23e-28!124;CL:0002087!5.09e-28!119;CL:0000860!1.25e-26!45;CL:0002009!4.74e-26!65;CL:0002194!1.31e-25!63;CL:0000576!1.31e-25!63;CL:0000040!1.31e-25!63;CL:0000559!1.31e-25!63;CL:0000839!1.21e-24!70;CL:0002032!1.94e-24!165;CL:0000837!1.94e-24!165;CL:0000738!3.60e-24!140;CL:0000037!1.47e-23!172;CL:0000566!1.47e-23!172;CL:0000557!8.33e-23!71;CL:0000988!3.75e-21!182;CL:0000766!3.42e-19!76;CL:0000763!4.16e-19!112;CL:0000049!4.16e-19!112;CL:0000945!2.41e-13!24;CL:0000826!2.41e-13!24;CL:0000134!2.53e-07!358;CL:0002320!7.87e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.75e-64;33!CL:0002057;2.75e-64;33!CL:0000473;9.52e-53;39!CL:0000234;9.52e-53;39!CL:0000576;2.45e-31;48!CL:0000766;4.02e-21;69!CL:0002087;2.36e-14;104!CL:0000763;8.29e-10;100!CL:0000738;4.43e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.15e-63,48;CL:0000234,1.15e-63,48;CL:0000860,2.13e-60,42;CL:0002057,2.13e-60,42;CL:0002194,4.14e-50,59;CL:0000576,4.14e-50,59;CL:0000040,4.14e-50,59;CL:0000559,4.14e-50,59;CL:0002009,2.33e-48,61;CL:0000839,1.93e-44,66;CL:0000557,1.00e-43,67;CL:0000766,1.91e-40,72;CL:0002087,1.77e-34,115;CL:0002031,7.31e-33,120;CL:0000738,1.76e-28,136;CL:0000763,1.07e-25,108;CL:0000049,1.07e-25,108;CL:0002032,2.31e-23,161;CL:0000837,2.31e-23,161;CL:0000037,3.36e-22,168;CL:0000988,7.72e-21,177;CL:0000134,4.99e-08,354;CL:0002320,8.90e-08,361;CL:0000034,6.00e-07,441;CL:0000219,6.83e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-41;42!CL:0000049;1.56e-08;108!UBERON:0005425;7.33e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.58e-21!102;UBERON:0003061!2.58e-21!102;UBERON:0002193!3.78e-19!112;UBERON:0002371!7.05e-19!80;UBERON:0001474!9.79e-17!86;UBERON:0002405!3.64e-15!115;UBERON:0004765!2.48e-14!101;UBERON:0001434!2.48e-14!101;UBERON:0003081!6.32e-09!216;UBERON:0002204!1.89e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!2.58e-21!102;UBERON:0003061!2.58e-21!102;UBERON:0002193!3.78e-19!112;UBERON:0002371!7.05e-19!80;UBERON:0001474!9.79e-17!86;UBERON:0002405!3.64e-15!115;UBERON:0004765!2.48e-14!101;UBERON:0001434!2.48e-14!101;UBERON:0003081!6.32e-09!216;UBERON:0002204!1.89e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.33e-08;1!UBERON:0001785;7.33e-08;1!UBERON:0002464;7.33e-08;1!UBERON:0004904;7.33e-08;1!UBERON:0001021;7.33e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.97e-38,76;UBERON:0001474,4.55e-35,82;UBERON:0002390,1.11e-31,98;UBERON:0003061,1.11e-31,98;UBERON:0004765,1.29e-31,90;UBERON:0002405,1.79e-30,93;UBERON:0002193,2.24e-28,108;UBERON:0001434,4.56e-28,100;UBERON:0002204,8.13e-17,167;UBERON:0003081,1.63e-14,203;UBERON:0000941,5.79e-08,1;UBERON:0001785,5.79e-08,1;UBERON:0002464,5.79e-08,1;UBERON:0004904,5.79e-08,1;UBERON:0001021,5.79e-08,1;UBERON:0003902,5.79e-08,1;UBERON:0005425,5.79e-08,1;UBERON:0000926,9.95e-08,315;UBERON:0004120,9.95e-08,315;UBERON:0006603,9.95e-08,315;UBERON:0002384,1.96e-07,371 | |||
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|short_description=p20@AMPD3 | |short_description=p20@AMPD3 | ||
}} | }} |
Latest revision as of 20:30, 24 September 2015
Short description: | p20@AMPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_AMPD3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 101bp_to_ENST00000528723_5end |
EntrezGene: | AMPD3 |
HGNC: | 470 |
UniProt: | B7Z763 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.15e-63 | 48 |
phagocyte | 1.15e-63 | 48 |
classical monocyte | 2.13e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.13e-60 | 42 |
monopoietic cell | 4.14e-50 | 59 |
monocyte | 4.14e-50 | 59 |
monoblast | 4.14e-50 | 59 |
promonocyte | 4.14e-50 | 59 |
macrophage dendritic cell progenitor | 2.33e-48 | 61 |
myeloid lineage restricted progenitor cell | 1.93e-44 | 66 |
granulocyte monocyte progenitor cell | 1.00e-43 | 67 |
myeloid leukocyte | 1.91e-40 | 72 |
nongranular leukocyte | 1.77e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 7.31e-33 | 120 |
leukocyte | 1.76e-28 | 136 |
myeloid cell | 1.07e-25 | 108 |
common myeloid progenitor | 1.07e-25 | 108 |
hematopoietic oligopotent progenitor cell | 2.31e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-23 | 161 |
hematopoietic stem cell | 3.36e-22 | 168 |
hematopoietic cell | 7.72e-21 | 177 |
mesenchymal cell | 4.99e-08 | 354 |
connective tissue cell | 8.90e-08 | 361 |
stem cell | 6.00e-07 | 441 |
motile cell | 6.83e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.97e-38 | 76 |
bone element | 4.55e-35 | 82 |
hematopoietic system | 1.11e-31 | 98 |
blood island | 1.11e-31 | 98 |
skeletal element | 1.29e-31 | 90 |
immune system | 1.79e-30 | 93 |
hemolymphoid system | 2.24e-28 | 108 |
skeletal system | 4.56e-28 | 100 |
musculoskeletal system | 8.13e-17 | 167 |
lateral plate mesoderm | 1.63e-14 | 203 |
cranial nerve II | 5.79e-08 | 1 |
cranial nerve | 5.79e-08 | 1 |
nerve trunk | 5.79e-08 | 1 |
nerve connecting eye with brain | 5.79e-08 | 1 |
nerve | 5.79e-08 | 1 |
retinal neural layer | 5.79e-08 | 1 |
presumptive neural retina | 5.79e-08 | 1 |
mesoderm | 9.95e-08 | 315 |
mesoderm-derived structure | 9.95e-08 | 315 |
presumptive mesoderm | 9.95e-08 | 315 |
connective tissue | 1.96e-07 | 371 |