FFCP PHASE1:Hg19::chr12:122230932..122230944,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122230932..122230944,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr12:122230932..122230944,- | |description=CAGE_peak_at_chr12:122230932..122230944,- | ||
|id=chr12:122230932..122230944,- | |id=chr12:122230932..122230944,- | ||
|ontology_enrichment_celltype=CL:0000738!1.54e-26!140;CL:0000988!1.70e-23!182;CL:0000037!2.51e-21!172;CL:0000566!2.51e-21!172;CL:0002032!6.57e-19!165;CL:0000837!6.57e-19!165;CL:0002087!1.03e-15!119;CL:0002031!1.17e-15!124;CL:0000838!8.44e-15!52;CL:0000542!2.22e-14!53;CL:0000051!2.22e-14!53;CL:0000451!7.62e-12!10;CL:0000990!1.61e-11!8;CL:0000080!7.93e-11!6;CL:0000453!1.33e-09!5;CL:0002393!3.83e-09!9;CL:0002397!3.83e-09!9;CL:0000094!1.52e-08!8;CL:0000081!4.65e-08!11;CL:0000084!4.73e-08!25;CL:0000827!4.73e-08!25;CL:0000763!4.00e-07!112;CL:0000049!4.00e-07!112;CL:0000775!7.44e-07!3;CL:0000840!8.99e-07!5;CL:0001029!8.99e-07!5 | |ontology_enrichment_celltype=CL:0000738!1.54e-26!140;CL:0000988!1.70e-23!182;CL:0000037!2.51e-21!172;CL:0000566!2.51e-21!172;CL:0002032!6.57e-19!165;CL:0000837!6.57e-19!165;CL:0002087!1.03e-15!119;CL:0002031!1.17e-15!124;CL:0000838!8.44e-15!52;CL:0000542!2.22e-14!53;CL:0000051!2.22e-14!53;CL:0000451!7.62e-12!10;CL:0000990!1.61e-11!8;CL:0000080!7.93e-11!6;CL:0000453!1.33e-09!5;CL:0002393!3.83e-09!9;CL:0002397!3.83e-09!9;CL:0000094!1.52e-08!8;CL:0000081!4.65e-08!11;CL:0000084!4.73e-08!25;CL:0000827!4.73e-08!25;CL:0000763!4.00e-07!112;CL:0000049!4.00e-07!112;CL:0000775!7.44e-07!3;CL:0000840!8.99e-07!5;CL:0001029!8.99e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.89e-16;6!CL:0002397;1.89e-16;6!CL:0000081;9.50e-16;11!CL:0000775;3.71e-15;3!CL:0000094;1.13e-12;8!CL:0000453;2.68e-09;5!CL:0000451;4.05e-09;10!CL:0000771;8.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,8.50e-16,11;CL:0000775,3.72e-15,3;CL:0000094,1.13e-12,8;CL:0000988,3.80e-11,177;CL:0002393,4.69e-11,9;CL:0002397,4.69e-11,9;CL:0000738,2.70e-09,136;CL:0000453,2.91e-09,5;CL:0000451,3.63e-09,10;CL:0000037,3.45e-07,168;CL:0000771,8.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;8.62e-12;1!DOID:0050177;8.62e-12;1!DOID:0050427;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.06e-12,1;DOID:0050177,4.06e-12,1;DOID:0050427,4.06e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.44e-19!15;UBERON:0000179!8.44e-19!15;UBERON:0000463!8.44e-19!15;UBERON:0002390!1.36e-12!102;UBERON:0003061!1.36e-12!102;UBERON:0002193!2.67e-11!112 | |ontology_enrichment_uberon=UBERON:0000178!8.44e-19!15;UBERON:0000179!8.44e-19!15;UBERON:0000463!8.44e-19!15;UBERON:0002390!1.36e-12!102;UBERON:0003061!1.36e-12!102;UBERON:0002193!2.67e-11!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.32e-25;15!UBERON:0000179;9.32e-25;15!UBERON:0000463;9.32e-25;15!UBERON:0002390;1.69e-11;32!UBERON:0002331;4.24e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.36e-25,15;UBERON:0000179,9.36e-25,15;UBERON:0000463,9.36e-25,15;UBERON:0002331,3.31e-10,10;UBERON:0000358,3.31e-10,10;UBERON:0000307,3.31e-10,10;UBERON:0000091,3.31e-10,10;UBERON:0000087,3.31e-10,10;UBERON:0007010,3.31e-10,10;UBERON:0007806,3.31e-10,10;UBERON:0008780,3.31e-10,10;UBERON:0005728,3.31e-10,10;UBERON:0002390,3.53e-09,98;UBERON:0003061,3.53e-09,98;UBERON:0002193,3.30e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.164201178899891,0.314843125254717,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,2.00544447470142,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.949387162322653,0,0.212604299965044,0,0,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0.34362744548263,0,0,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.431255149719035,0.641715181398742,0,0,0,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,0.476463550915578,0.411362273086194,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,0,0,0.0711418433484141,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,1.48260564340311,1.60633120630454,2.40170483862547,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.372757606696298,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0.389720617678777,1.32864840313363,1.14495775979091,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0.31020638566432,0,0.111855431797792,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0.178553938605658,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.808426818959282,0,0,0,0,0,1.9234109538194 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.164201178899891,0.314843125254717,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,2.00544447470142,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.949387162322653,0,0.212604299965044,0,0,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0.34362744548263,0,0,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.431255149719035,0.641715181398742,0,0,0,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,0.476463550915578,0.411362273086194,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,0,0,0.0711418433484141,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,1.48260564340311,1.60633120630454,2.40170483862547,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.372757606696298,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0.389720617678777,1.32864840313363,1.14495775979091,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0.31020638566432,0,0.111855431797792,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0.178553938605658,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.808426818959282,0,0,0,0,0,1.9234109538194 | ||
|short_description=p@chr12:122230932..122230944,- | |short_description=p@chr12:122230932..122230944,- | ||
}} | }} |
Latest revision as of 05:59, 24 July 2015
Short description: | p@chr12:122230932..122230944, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122230932..122230944, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 8.50e-16 | 11 |
neutrophil | 3.72e-15 | 3 |
granulocyte | 1.13e-12 | 8 |
hematopoietic cell | 3.80e-11 | 177 |
intermediate monocyte | 4.69e-11 | 9 |
CD14-positive, CD16-positive monocyte | 4.69e-11 | 9 |
leukocyte | 2.70e-09 | 136 |
Langerhans cell | 2.91e-09 | 5 |
dendritic cell | 3.63e-09 | 10 |
hematopoietic stem cell | 3.45e-07 | 168 |
eosinophil | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 9.36e-25 | 15 |
haemolymphatic fluid | 9.36e-25 | 15 |
organism substance | 9.36e-25 | 15 |
umbilical cord | 3.31e-10 | 10 |
blastocyst | 3.31e-10 | 10 |
blastula | 3.31e-10 | 10 |
bilaminar disc | 3.31e-10 | 10 |
inner cell mass | 3.31e-10 | 10 |
cleaving embryo | 3.31e-10 | 10 |
connecting stalk | 3.31e-10 | 10 |
inner cell mass derived epiblast | 3.31e-10 | 10 |
extraembryonic mesoderm | 3.31e-10 | 10 |
hematopoietic system | 3.53e-09 | 98 |
blood island | 3.53e-09 | 98 |
hemolymphoid system | 3.30e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.06e-12 | 1 |
monogenic disease | 4.06e-12 | 1 |
xeroderma pigmentosum | 4.06e-12 | 1 |