FFCP PHASE1:Hg19::chr12:24858748..24858761,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:24858748..24858761,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr12:24858748..24858761,- | |description=CAGE_peak_at_chr12:24858748..24858761,- | ||
|id=chr12:24858748..24858761,- | |id=chr12:24858748..24858761,- | ||
|ontology_enrichment_celltype=CL:0002057!8.36e-41!42;CL:0000860!7.52e-38!45;CL:0002009!4.03e-31!65;CL:0002194!8.77e-29!63;CL:0000576!8.77e-29!63;CL:0000040!8.77e-29!63;CL:0000559!8.77e-29!63;CL:0000557!3.35e-28!71;CL:0000839!1.41e-25!70;CL:0000766!2.71e-23!76;CL:0002087!3.40e-21!119;CL:0002031!3.39e-20!124;CL:0000738!3.19e-19!140;CL:0000988!1.62e-18!182;CL:0000080!4.51e-17!6;CL:0000763!1.53e-16!112;CL:0000049!1.53e-16!112;CL:0000037!8.26e-15!172;CL:0000566!8.26e-15!172;CL:0002032!4.20e-14!165;CL:0000837!4.20e-14!165 | |ontology_enrichment_celltype=CL:0002057!8.36e-41!42;CL:0000860!7.52e-38!45;CL:0002009!4.03e-31!65;CL:0002194!8.77e-29!63;CL:0000576!8.77e-29!63;CL:0000040!8.77e-29!63;CL:0000559!8.77e-29!63;CL:0000557!3.35e-28!71;CL:0000839!1.41e-25!70;CL:0000766!2.71e-23!76;CL:0002087!3.40e-21!119;CL:0002031!3.39e-20!124;CL:0000738!3.19e-19!140;CL:0000988!1.62e-18!182;CL:0000080!4.51e-17!6;CL:0000763!1.53e-16!112;CL:0000049!1.53e-16!112;CL:0000037!8.26e-15!172;CL:0000566!8.26e-15!172;CL:0002032!4.20e-14!165;CL:0000837!4.20e-14!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.71e-51;33!CL:0002057;9.71e-51;33!CL:0000473;2.43e-36;39!CL:0000234;2.43e-36;39!CL:0000576;1.87e-20;48!CL:0000766;9.81e-16;69!CL:0002087;4.61e-11;104!CL:0000763;3.13e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.91e-44,42;CL:0002057,3.91e-44,42;CL:0000473,1.78e-38,48;CL:0000234,1.78e-38,48;CL:0002194,1.53e-30,59;CL:0000576,1.53e-30,59;CL:0000040,1.53e-30,59;CL:0000559,1.53e-30,59;CL:0002009,1.61e-29,61;CL:0000839,3.18e-27,66;CL:0000557,8.34e-27,67;CL:0000766,6.96e-25,72;CL:0000763,3.12e-16,108;CL:0000049,3.12e-16,108;CL:0000988,3.07e-15,177;CL:0002087,3.60e-15,115;CL:0002031,1.74e-14,120;CL:0000738,1.25e-12,136;CL:0002032,1.85e-10,161;CL:0000837,1.85e-10,161;CL:0000037,5.77e-10,168 | |||
|ontology_enrichment_development_v019=CL:0002057;3.46e-29;42 | |||
|ontology_enrichment_disease=DOID:0060060!2.17e-07!1;DOID:0060061!2.17e-07!1;DOID:8691!2.17e-07!1 | |ontology_enrichment_disease=DOID:0060060!2.17e-07!1;DOID:0060061!2.17e-07!1;DOID:8691!2.17e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.12e-28!102;UBERON:0003061!3.12e-28!102;UBERON:0002193!9.58e-28!112;UBERON:0002371!1.25e-24!80;UBERON:0001474!1.16e-22!86;UBERON:0004765!5.98e-21!101;UBERON:0001434!5.98e-21!101;UBERON:0002405!6.84e-18!115;UBERON:0002204!1.98e-12!167;UBERON:0003081!5.80e-11!216;UBERON:0002372!3.17e-07!1;UBERON:0001961!3.17e-07!1;UBERON:0001744!3.17e-07!1;UBERON:0001735!3.17e-07!1;UBERON:0000178!6.67e-07!15;UBERON:0000179!6.67e-07!15;UBERON:0000463!6.67e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!3.12e-28!102;UBERON:0003061!3.12e-28!102;UBERON:0002193!9.58e-28!112;UBERON:0002371!1.25e-24!80;UBERON:0001474!1.16e-22!86;UBERON:0004765!5.98e-21!101;UBERON:0001434!5.98e-21!101;UBERON:0002405!6.84e-18!115;UBERON:0002204!1.98e-12!167;UBERON:0003081!5.80e-11!216;UBERON:0002372!3.17e-07!1;UBERON:0001961!3.17e-07!1;UBERON:0001744!3.17e-07!1;UBERON:0001735!3.17e-07!1;UBERON:0000178!6.67e-07!15;UBERON:0000179!6.67e-07!15;UBERON:0000463!6.67e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.35e-12;10!UBERON:0000178;1.99e-08;15!UBERON:0000179;1.99e-08;15!UBERON:0000463;1.99e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.42e-28,98;UBERON:0003061,1.42e-28,98;UBERON:0002193,7.99e-26,108;UBERON:0002371,1.59e-23,76;UBERON:0001474,9.87e-22,82;UBERON:0004765,1.04e-19,90;UBERON:0002405,4.90e-19,93;UBERON:0001434,1.26e-17,100;UBERON:0003081,4.26e-13,203;UBERON:0002331,2.39e-12,10;UBERON:0000358,2.39e-12,10;UBERON:0000307,2.39e-12,10;UBERON:0000091,2.39e-12,10;UBERON:0000087,2.39e-12,10;UBERON:0007010,2.39e-12,10;UBERON:0007806,2.39e-12,10;UBERON:0008780,2.39e-12,10;UBERON:0005728,2.39e-12,10;UBERON:0002204,4.94e-10,167;UBERON:0000178,2.02e-08,15;UBERON:0000179,2.02e-08,15;UBERON:0000463,2.02e-08,15;UBERON:0000926,7.36e-08,315;UBERON:0004120,7.36e-08,315;UBERON:0006603,7.36e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0.863077176966451,0.256160706529101,0.709446689665756,12.0660988257816,7.10033151942209,16.251178391321,0,0,0.224723484445085,19.2832852193669,21.8231738411744,28.7701706609569,0.329851300186716,0,0,2.61188314765726,4.53908179752912,5.60540024096017,0,0,0,1.21079900526674,6.2607198117886,18.0383560841304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04085918757057,1.48276726735803,2.40170483862547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0.863077176966451,0.256160706529101,0.709446689665756,12.0660988257816,7.10033151942209,16.251178391321,0,0,0.224723484445085,19.2832852193669,21.8231738411744,28.7701706609569,0.329851300186716,0,0,2.61188314765726,4.53908179752912,5.60540024096017,0,0,0,1.21079900526674,6.2607198117886,18.0383560841304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04085918757057,1.48276726735803,2.40170483862547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:24858748..24858761,- | |short_description=p@chr12:24858748..24858761,- | ||
}} | }} |
Latest revision as of 07:40, 24 July 2015
Short description: | p@chr12:24858748..24858761, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24858748..24858761, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.91e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.91e-44 | 42 |
defensive cell | 1.78e-38 | 48 |
phagocyte | 1.78e-38 | 48 |
monopoietic cell | 1.53e-30 | 59 |
monocyte | 1.53e-30 | 59 |
monoblast | 1.53e-30 | 59 |
promonocyte | 1.53e-30 | 59 |
macrophage dendritic cell progenitor | 1.61e-29 | 61 |
myeloid lineage restricted progenitor cell | 3.18e-27 | 66 |
granulocyte monocyte progenitor cell | 8.34e-27 | 67 |
myeloid leukocyte | 6.96e-25 | 72 |
myeloid cell | 3.12e-16 | 108 |
common myeloid progenitor | 3.12e-16 | 108 |
hematopoietic cell | 3.07e-15 | 177 |
nongranular leukocyte | 3.60e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.74e-14 | 120 |
leukocyte | 1.25e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.85e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-10 | 161 |
hematopoietic stem cell | 5.77e-10 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.42e-28 | 98 |
blood island | 1.42e-28 | 98 |
hemolymphoid system | 7.99e-26 | 108 |
bone marrow | 1.59e-23 | 76 |
bone element | 9.87e-22 | 82 |
skeletal element | 1.04e-19 | 90 |
immune system | 4.90e-19 | 93 |
skeletal system | 1.26e-17 | 100 |
lateral plate mesoderm | 4.26e-13 | 203 |
umbilical cord | 2.39e-12 | 10 |
blastocyst | 2.39e-12 | 10 |
blastula | 2.39e-12 | 10 |
bilaminar disc | 2.39e-12 | 10 |
inner cell mass | 2.39e-12 | 10 |
cleaving embryo | 2.39e-12 | 10 |
connecting stalk | 2.39e-12 | 10 |
inner cell mass derived epiblast | 2.39e-12 | 10 |
extraembryonic mesoderm | 2.39e-12 | 10 |
musculoskeletal system | 4.94e-10 | 167 |
blood | 2.02e-08 | 15 |
haemolymphatic fluid | 2.02e-08 | 15 |
organism substance | 2.02e-08 | 15 |
mesoderm | 7.36e-08 | 315 |
mesoderm-derived structure | 7.36e-08 | 315 |
presumptive mesoderm | 7.36e-08 | 315 |