FFCP PHASE1:Hg19::chr18:33047157..33047168,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:33047157..33047168,-
|short_description=p@chr18:33047157..33047168,-
|description=CAGE_peak_at_chr18:33047157..33047168,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:33047157..33047168,- | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr18:33047157..33047168,- | |||
|id=chr18:33047157..33047168,- | |||
|ontology_enrichment_celltype=CL:0002139!4.97e-88!24;CL:0000115!2.94e-80!35;CL:0000071!2.10e-67!18;CL:0002546!2.10e-67!18;CL:0002078!2.48e-62!44;CL:0000213!1.95e-46!57;CL:0000215!1.95e-46!57;CL:1000413!3.19e-34!9;CL:0002543!1.46e-23!6;CL:0002544!3.52e-23!6;CL:0005020!7.84e-22!6;CL:0002138!7.84e-22!6;CL:0005022!7.84e-22!6;CL:0000222!5.27e-20!119;CL:0000076!3.14e-16!62;CL:0002144!9.50e-13!3;CL:0002618!1.15e-12!3;CL:0000666!5.30e-09!4;CL:0002188!5.30e-09!4;CL:1000612!9.54e-09!7;CL:1000746!9.54e-09!7;CL:0002545!1.10e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.78e-121;18!CL:0002139;6.19e-113;24!CL:0000115;2.85e-89;36!CL:1000413;6.83e-68;9!CL:0002078;7.51e-54;45!CL:0002544;1.73e-45;6!CL:0000213;3.08e-40;58!CL:0000215;3.08e-40;58!CL:0002543;9.53e-33;6!CL:0002144;3.91e-24;3!CL:0002618;5.14e-24;3!CL:0000076;9.10e-20;63!CL:0002545;5.54e-16;2!CL:0002188;4.27e-14;5!CL:1000746;3.17e-10;7!CL:1000612;3.17e-10;7!CL:0000817;2.60e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.80e-121,18;CL:0002546,2.80e-121,18;CL:0002139,8.52e-113,24;CL:0000115,6.56e-109,36;CL:0002078,2.00e-86,45;CL:1000413,7.13e-68,9;CL:0000213,2.95e-66,58;CL:0000215,2.95e-66,58;CL:0002544,2.28e-45,6;CL:0002543,9.87e-33,6;CL:0000076,1.58e-32,63;CL:0000222,7.79e-30,121;CL:0002144,3.62e-24,3;CL:0002618,5.35e-24,3;CL:0002545,5.99e-16,2;CL:0002188,5.48e-14,5;CL:0002321,2.69e-12,250;CL:0000066,3.12e-12,253;CL:1000746,3.78e-10,7;CL:1000612,3.78e-10,7 | |||
|ontology_enrichment_development_v019=CL:0002546;2.78e-121;18!CL:0000222;5.64e-13;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,4.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.10e-67!18;UBERON:0004638!2.10e-67!18;UBERON:0004852!2.10e-67!18;UBERON:0000487!2.81e-54!22;UBERON:0006914!3.45e-47!25;UBERON:0003915!3.19e-34!9;UBERON:0004700!3.19e-34!9;UBERON:0001917!3.19e-34!9;UBERON:0000055!1.60e-31!69;UBERON:0002049!1.13e-26!79;UBERON:0007798!1.13e-26!79;UBERON:0002465!3.37e-22!10;UBERON:0001981!3.08e-21!60;UBERON:0007500!3.08e-21!60;UBERON:0004537!3.08e-21!60;UBERON:0006965!3.08e-21!60;UBERON:0001638!1.25e-20!9;UBERON:0003920!1.25e-20!9;UBERON:0004582!1.25e-20!9;UBERON:0004535!2.12e-20!110;UBERON:0004872!2.76e-20!84;UBERON:0001009!1.14e-19!113;UBERON:0003914!5.48e-17!118;UBERON:0001473!3.22e-16!8;UBERON:0004536!3.22e-16!8;UBERON:0006558!3.22e-16!8;UBERON:0001915!9.50e-13!3;UBERON:0001982!9.50e-13!3;UBERON:0004111!1.06e-11!241;UBERON:0000477!1.10e-11!286;UBERON:0000025!2.40e-09!194;UBERON:0000490!4.54e-09!138;UBERON:0000074!9.54e-09!7;UBERON:0001229!9.54e-09!7;UBERON:0001230!9.54e-09!7;UBERON:0005749!9.54e-09!7;UBERON:0004199!9.54e-09!7;UBERON:0004209!9.54e-09!7;UBERON:0004198!9.54e-09!7;UBERON:0005800!1.10e-08!2;UBERON:0001515!1.10e-08!2;UBERON:0002066!9.46e-08!5;UBERON:0003081!5.67e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.78e-121;18!UBERON:0001986;2.78e-121;18!UBERON:0004852;2.78e-121;18!UBERON:0000487;1.03e-98;22!UBERON:0006914;1.60e-86;25!UBERON:0003915;6.83e-68;9!UBERON:0004700;6.83e-68;9!UBERON:0001917;6.83e-68;9!UBERON:0000490;9.39e-59;33!UBERON:0007500;1.15e-25;56!UBERON:0001981;1.15e-25;56!UBERON:0004537;1.15e-25;56!UBERON:0010523;3.91e-24;3!UBERON:0001915;3.91e-24;3!UBERON:0001982;3.91e-24;3!UBERON:0001638;8.18e-22;9!UBERON:0003920;8.18e-22;9!UBERON:0004582;8.18e-22;9!UBERON:0000055;1.23e-21;65!UBERON:0003914;1.03e-19;74!UBERON:0005800;5.54e-16;2!UBERON:0001515;5.54e-16;2!UBERON:0002049;5.60e-15;75!UBERON:0007798;5.60e-15;75!UBERON:0002066;1.18e-14;5!UBERON:0000025;1.44e-13;93!UBERON:0001637;4.01e-13;42!UBERON:0003509;4.01e-13;42!UBERON:0004572;4.01e-13;42!UBERON:0000947;1.03e-12;21!UBERON:0010191;1.03e-12;21!UBERON:0001009;9.48e-11;112!UBERON:0000074;3.17e-10;7!UBERON:0001229;3.17e-10;7!UBERON:0004535;9.80e-10;109!UBERON:0000119;1.12e-08;139!UBERON:0010260;2.29e-08;9!UBERON:0004573;2.97e-08;33!UBERON:0004571;2.97e-08;33!UBERON:0000353;3.31e-08;15!UBERON:0004111;5.79e-08;130!UBERON:0000483;2.46e-07;136 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.80e-121,18;UBERON:0001986,2.80e-121,18;UBERON:0004852,2.80e-121,18;UBERON:0000487,1.04e-98,22;UBERON:0006914,1.61e-86,25;UBERON:0003915,7.13e-68,9;UBERON:0004700,7.13e-68,9;UBERON:0001917,7.13e-68,9;UBERON:0000055,6.04e-42,68;UBERON:0007500,2.68e-39,59;UBERON:0001981,2.68e-39,59;UBERON:0004537,2.68e-39,59;UBERON:0006965,2.68e-39,59;UBERON:0002049,3.99e-36,78;UBERON:0007798,3.99e-36,78;UBERON:0004872,5.29e-27,83;UBERON:0003914,2.08e-25,117;UBERON:0004535,7.45e-25,109;UBERON:0010523,3.62e-24,3;UBERON:0001915,3.62e-24,3;UBERON:0001982,3.62e-24,3;UBERON:0001009,4.29e-24,112;UBERON:0001638,8.37e-22,9;UBERON:0003920,8.37e-22,9;UBERON:0004582,8.37e-22,9;UBERON:0005800,5.99e-16,2;UBERON:0001515,5.99e-16,2;UBERON:0002066,1.21e-14,5;UBERON:0000025,6.08e-14,192;UBERON:0000490,1.07e-13,148;UBERON:0001637,1.55e-13,42;UBERON:0003509,1.55e-13,42;UBERON:0004572,1.55e-13,42;UBERON:0004111,4.85e-13,240;UBERON:0003081,5.48e-13,203;UBERON:0000947,1.11e-12,21;UBERON:0010191,1.11e-12,21;UBERON:0010532,3.78e-10,7;UBERON:0000074,3.78e-10,7;UBERON:0001229,3.78e-10,7;UBERON:0001230,3.78e-10,7;UBERON:0003220,3.78e-10,7;UBERON:0005749,3.78e-10,7;UBERON:0004199,3.78e-10,7;UBERON:0004209,3.78e-10,7;UBERON:0004198,3.78e-10,7;UBERON:0005103,6.06e-09,8;UBERON:0000083,6.06e-09,8;UBERON:0009201,6.06e-09,8;UBERON:0006553,6.06e-09,8;UBERON:0003074,6.06e-09,8;UBERON:0003060,6.06e-09,8;UBERON:0010260,2.32e-08,9;UBERON:0000353,3.65e-08,15;UBERON:0000080,5.27e-08,9;UBERON:0002120,5.27e-08,9;UBERON:0004875,5.27e-08,9;UBERON:0005721,5.27e-08,9;UBERON:0005754,5.27e-08,9;UBERON:0007297,5.27e-08,9;UBERON:0004573,6.82e-08,33;UBERON:0004571,6.82e-08,33;UBERON:0000483,2.39e-07,306;UBERON:0000119,3.07e-07,309;UBERON:0000926,5.00e-07,315;UBERON:0004120,5.00e-07,315;UBERON:0006603,5.00e-07,315 | |||
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|short_description=p@chr18:33047157..33047168,- | |||
}} | }} |
Latest revision as of 00:35, 26 July 2015
Short description: | p@chr18:33047157..33047168, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:33047157..33047168, - |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.80e-121 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.80e-121 | 18 |
endothelial cell of vascular tree | 8.52e-113 | 24 |
endothelial cell | 6.56e-109 | 36 |
meso-epithelial cell | 2.00e-86 | 45 |
endothelial cell of artery | 7.13e-68 | 9 |
lining cell | 2.95e-66 | 58 |
barrier cell | 2.95e-66 | 58 |
aortic endothelial cell | 2.28e-45 | 6 |
vein endothelial cell | 9.87e-33 | 6 |
squamous epithelial cell | 1.58e-32 | 63 |
mesodermal cell | 7.79e-30 | 121 |
capillary endothelial cell | 3.62e-24 | 3 |
endothelial cell of umbilical vein | 5.35e-24 | 3 |
thoracic aorta endothelial cell | 5.99e-16 | 2 |
glomerular endothelial cell | 5.48e-14 | 5 |
embryonic cell | 2.69e-12 | 250 |
epithelial cell | 3.12e-12 | 253 |
glomerular cell | 3.78e-10 | 7 |
kidney corpuscule cell | 3.78e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 4.91e-09 | 1 |