FFCP PHASE1:Hg19::chr1:40882919..40882923,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:40882919..40882923,+ | |||
|coexpression_cluster_id=C2583 | |coexpression_cluster_id=C2583 | ||
|description=CAGE_peak_at_chr1:40882919..40882923,+ | |description=CAGE_peak_at_chr1:40882919..40882923,+ | ||
|id=chr1:40882919..40882923,+ | |id=chr1:40882919..40882923,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.71e-37!172;CL:0000566!1.71e-37!172;CL:0002032!5.21e-37!165;CL:0000837!5.21e-37!165;CL:0002087!6.80e-37!119;CL:0000738!1.49e-36!140;CL:0002031!2.20e-35!124;CL:0000988!2.32e-35!182;CL:0000542!7.70e-20!53;CL:0000051!7.70e-20!53;CL:0000838!2.03e-19!52;CL:0000763!2.68e-17!112;CL:0000049!2.68e-17!112;CL:0000839!6.09e-16!70;CL:0002009!3.33e-15!65;CL:0002194!3.41e-15!63;CL:0000576!3.41e-15!63;CL:0000040!3.41e-15!63;CL:0000559!3.41e-15!63;CL:0000557!1.35e-14!71;CL:0000766!1.96e-14!76;CL:0002057!1.44e-13!42;CL:0000860!4.93e-12!45;CL:0000945!2.23e-10!24;CL:0000826!2.23e-10!24;CL:0000084!9.39e-09!25;CL:0000827!9.39e-09!25;CL:0000791!2.55e-08!18;CL:0000789!2.55e-08!18;CL:0002420!2.55e-08!18;CL:0002419!2.55e-08!18;CL:0000790!2.55e-08!18;CL:0000236!8.08e-08!14 | |ontology_enrichment_celltype=CL:0000037!1.71e-37!172;CL:0000566!1.71e-37!172;CL:0002032!5.21e-37!165;CL:0000837!5.21e-37!165;CL:0002087!6.80e-37!119;CL:0000738!1.49e-36!140;CL:0002031!2.20e-35!124;CL:0000988!2.32e-35!182;CL:0000542!7.70e-20!53;CL:0000051!7.70e-20!53;CL:0000838!2.03e-19!52;CL:0000763!2.68e-17!112;CL:0000049!2.68e-17!112;CL:0000839!6.09e-16!70;CL:0002009!3.33e-15!65;CL:0002194!3.41e-15!63;CL:0000576!3.41e-15!63;CL:0000040!3.41e-15!63;CL:0000559!3.41e-15!63;CL:0000557!1.35e-14!71;CL:0000766!1.96e-14!76;CL:0002057!1.44e-13!42;CL:0000860!4.93e-12!45;CL:0000945!2.23e-10!24;CL:0000826!2.23e-10!24;CL:0000084!9.39e-09!25;CL:0000827!9.39e-09!25;CL:0000791!2.55e-08!18;CL:0000789!2.55e-08!18;CL:0002420!2.55e-08!18;CL:0002419!2.55e-08!18;CL:0000790!2.55e-08!18;CL:0000236!8.08e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.22e-13;53!CL:0002087;2.25e-13;104!CL:0000236;1.31e-12;13!CL:0000945;1.12e-11;24!CL:0000791;7.55e-11;18!CL:0000789;7.55e-11;18!CL:0002419;7.55e-11;18!CL:0000576;2.20e-10;48!CL:0000624;1.26e-08;6!CL:0000860;5.21e-08;33!CL:0002057;5.21e-08;33!CL:0000084;5.37e-08;25!CL:0000738;1.04e-07;136!CL:0000988;6.89e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.44e-37,177;CL:0000037,4.75e-37,168;CL:0002087,2.52e-36,115;CL:0002032,9.23e-36,161;CL:0000837,9.23e-36,161;CL:0000738,2.19e-34,136;CL:0002031,1.61e-32,120;CL:0000542,8.12e-22,53;CL:0000051,8.12e-22,53;CL:0000838,4.52e-21,52;CL:0000763,4.62e-15,108;CL:0000049,4.62e-15,108;CL:0002009,7.29e-13,61;CL:0002194,2.41e-12,59;CL:0000576,2.41e-12,59;CL:0000040,2.41e-12,59;CL:0000559,2.41e-12,59;CL:0000839,6.11e-12,66;CL:0000945,1.43e-11,24;CL:0000826,1.43e-11,24;CL:0000236,1.68e-11,14;CL:0000791,4.17e-11,18;CL:0000789,4.17e-11,18;CL:0002420,4.17e-11,18;CL:0002419,4.17e-11,18;CL:0000790,4.17e-11,18;CL:0000557,5.85e-11,67;CL:0000860,6.57e-11,42;CL:0002057,6.57e-11,42;CL:0000766,1.15e-10,72;CL:0000473,7.81e-10,48;CL:0000234,7.81e-10,48;CL:0000624,7.19e-09,6;CL:0000084,3.24e-08,25;CL:0000827,3.24e-08,25;CL:0000134,4.50e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.22e-13;53!CL:0000790;7.55e-11;18!CL:0002057;3.99e-08;42!CL:0000049;9.35e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-20!102;UBERON:0003061!1.33e-20!102;UBERON:0002193!4.75e-18!112;UBERON:0007023!8.41e-16!115;UBERON:0002371!1.52e-12!80;UBERON:0001474!2.18e-12!86;UBERON:0004765!6.82e-10!101;UBERON:0001434!6.82e-10!101;UBERON:0002405!3.80e-09!115;UBERON:0000178!2.56e-08!15;UBERON:0000179!2.56e-08!15;UBERON:0000463!2.56e-08!15;UBERON:0002780!9.11e-08!41;UBERON:0001890!9.11e-08!41;UBERON:0006240!9.11e-08!41;UBERON:0001049!2.29e-07!57;UBERON:0005068!2.29e-07!57;UBERON:0006241!2.29e-07!57;UBERON:0007135!2.29e-07!57;UBERON:0003080!2.60e-07!42;UBERON:0002020!9.95e-07!34;UBERON:0003528!9.95e-07!34 | |ontology_enrichment_uberon=UBERON:0002390!1.33e-20!102;UBERON:0003061!1.33e-20!102;UBERON:0002193!4.75e-18!112;UBERON:0007023!8.41e-16!115;UBERON:0002371!1.52e-12!80;UBERON:0001474!2.18e-12!86;UBERON:0004765!6.82e-10!101;UBERON:0001434!6.82e-10!101;UBERON:0002405!3.80e-09!115;UBERON:0000178!2.56e-08!15;UBERON:0000179!2.56e-08!15;UBERON:0000463!2.56e-08!15;UBERON:0002780!9.11e-08!41;UBERON:0001890!9.11e-08!41;UBERON:0006240!9.11e-08!41;UBERON:0001049!2.29e-07!57;UBERON:0005068!2.29e-07!57;UBERON:0006241!2.29e-07!57;UBERON:0007135!2.29e-07!57;UBERON:0003080!2.60e-07!42;UBERON:0002020!9.95e-07!34;UBERON:0003528!9.95e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-12;15!UBERON:0000179;1.21e-12;15!UBERON:0000463;1.21e-12;15 | |||
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| ||
|short_description=p@chr1:40882919..40882923,+ | |short_description=p@chr1:40882919..40882923,+ | ||
}} | }} |
Latest revision as of 08:12, 28 July 2015
Short description: | p@chr1:40882919..40882923, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:40882919..40882923, + |
Coexpression cluster: | C2583_CD19_Neutrophils_CD14_Peripheral_Whole_CD4_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.42e-18 | 98 |
blood island | 3.42e-18 | 98 |
hemolymphoid system | 2.61e-16 | 108 |
blood | 1.83e-12 | 15 |
haemolymphatic fluid | 1.83e-12 | 15 |
organism substance | 1.83e-12 | 15 |
bone marrow | 1.58e-09 | 76 |
immune system | 4.88e-09 | 93 |
bone element | 3.06e-08 | 82 |
adult organism | 1.14e-07 | 114 |
brain grey matter | 6.05e-07 | 34 |
gray matter | 6.05e-07 | 34 |
neural tube | 6.79e-07 | 56 |
neural rod | 6.79e-07 | 56 |
future spinal cord | 6.79e-07 | 56 |
neural keel | 6.79e-07 | 56 |
regional part of nervous system | 7.83e-07 | 53 |
regional part of brain | 7.83e-07 | 53 |
skeletal element | 7.94e-07 | 90 |